RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 BCORL1Q5H9F3 1711 aa19.62■□□□□ 0.73
UBR1-212ENST00000627960 POGZQ7Z3K3 1410 aa19.6■□□□□ 0.73
UBR1-212ENST00000627960 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
UBR1-212ENST00000627960 ZFYVE16Q7Z3T8 1539 aa19.6■□□□□ 0.73
UBR1-212ENST00000627960 MAGI2Q86UL8 1455 aa19.6■□□□□ 0.73
UBR1-212ENST00000627960 ARHGAP5Q13017 1502 aa19.59■□□□□ 0.73
UBR1-212ENST00000627960 CDC42BPBQ9Y5S2 1711 aa19.59■□□□□ 0.73
UBR1-212ENST00000627960 YEATS2Q9ULM3 1422 aa19.57■□□□□ 0.72
UBR1-212ENST00000627960 HECW2Q9P2P5 1572 aa19.56■□□□□ 0.72
UBR1-212ENST00000627960 PTPRMP28827 1452 aa19.55■□□□□ 0.72
UBR1-212ENST00000627960 PREX2Q70Z35 1606 aa19.54■□□□□ 0.72
UBR1-212ENST00000627960 MADDQ8WXG6 1647 aa19.54■□□□□ 0.72
UBR1-212ENST00000627960 SIGLEC1Q9BZZ2 1709 aa19.54■□□□□ 0.72
UBR1-212ENST00000627960 CDC42BPAQ5VT25 1732 aa19.52■□□□□ 0.72
UBR1-212ENST00000627960 ZNF518AQ6AHZ1 1483 aa19.51■□□□□ 0.71
UBR1-212ENST00000627960 ATP10AO60312 1499 aa19.5■□□□□ 0.71
UBR1-212ENST00000627960 AFAP1Q8N556 730 aa19.5■□□□□ 0.71
UBR1-212ENST00000627960 KDM5CP41229 1560 aa19.49■□□□□ 0.71
UBR1-212ENST00000627960 CEP162Q5TB80 1403 aa19.49■□□□□ 0.71
UBR1-212ENST00000627960 RIMS1Q86UR5 1692 aaKnown RBP19.49■□□□□ 0.71
UBR1-212ENST00000627960 ITSN2Q9NZM3 1697 aa19.46■□□□□ 0.71
UBR1-212ENST00000627960 ABCC1P33527 1531 aa19.46■□□□□ 0.71
UBR1-212ENST00000627960 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
UBR1-212ENST00000627960 C9orf84Q5VXU9 1444 aa19.46■□□□□ 0.71
UBR1-212ENST00000627960 MLECQ14165 292 aa19.44■□□□□ 0.7
UBR1-212ENST00000627960 GPATCH8Q9UKJ3 1502 aaKnown RBP19.44■□□□□ 0.7
UBR1-212ENST00000627960 TRAPPC8Q9Y2L5 1435 aa19.43■□□□□ 0.7
UBR1-212ENST00000627960 MLH3Q9UHC1 1453 aa19.42■□□□□ 0.7
UBR1-212ENST00000627960 FER1L4A9Z1Z3 1794 aa19.42■□□□□ 0.7
UBR1-212ENST00000627960 MYT1LQ9UL68 1186 aa19.42■□□□□ 0.7
UBR1-212ENST00000627960 MTUS2Q5JR59 1369 aa19.42■□□□□ 0.7
UBR1-212ENST00000627960 DIP2CQ9Y2E4 1556 aa19.41■□□□□ 0.7
UBR1-212ENST00000627960 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
UBR1-212ENST00000627960 ZNF777Q9ULD5 760 aaPredicted RBP19.41■□□□□ 0.7
UBR1-212ENST00000627960 SAMD9LQ8IVG5 1584 aa19.4■□□□□ 0.7
UBR1-212ENST00000627960 CCNB3Q8WWL7 1395 aa19.39■□□□□ 0.69
UBR1-212ENST00000627960 ABCA6Q8N139 1617 aa19.39■□□□□ 0.69
UBR1-212ENST00000627960 REREQ9P2R6 1566 aa19.38■□□□□ 0.69
UBR1-212ENST00000627960 KIDINS220Q9ULH0 1771 aa19.37■□□□□ 0.69
UBR1-212ENST00000627960 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
UBR1-212ENST00000627960 EHBP1L1Q8N3D4 1523 aa19.36■□□□□ 0.69
UBR1-212ENST00000627960 SYCP2Q9BX26 1530 aa19.35■□□□□ 0.69
UBR1-212ENST00000627960 HNRNPMP52272 730 aaKnown RBP eCLIP19.35■□□□□ 0.69
UBR1-212ENST00000627960 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
UBR1-212ENST00000627960 PLEKHH2Q8IVE3 1493 aa19.34■□□□□ 0.69
UBR1-212ENST00000627960 KIAA1107Q9UPP5 1409 aa19.34■□□□□ 0.69
UBR1-212ENST00000627960 LMTK3Q96Q04 1460 aa19.33■□□□□ 0.68
UBR1-212ENST00000627960 TIAM1Q13009 1591 aa19.32■□□□□ 0.68
UBR1-212ENST00000627960 AGLP35573 1532 aa19.32■□□□□ 0.68
UBR1-212ENST00000627960 SPAG9O60271 1321 aaKnown RBP19.3■□□□□ 0.68
UBR1-212ENST00000627960 SUPT6HQ7KZ85 1726 aaKnown RBP19.28■□□□□ 0.68
UBR1-212ENST00000627960 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
UBR1-212ENST00000627960 ZNF644Q9H582 1327 aaPredicted RBP19.26■□□□□ 0.67
UBR1-212ENST00000627960 CEBPAP49715 358 aaPredicted RBP19.26■□□□□ 0.67
UBR1-212ENST00000627960 INO80Q9ULG1 1556 aaPredicted RBP19.26■□□□□ 0.67
UBR1-212ENST00000627960 ATP7AQ04656 1500 aa19.25■□□□□ 0.67
UBR1-212ENST00000627960 NCOA2Q15596 1464 aa19.25■□□□□ 0.67
UBR1-212ENST00000627960 SETD1BQ9UPS6 1966 aaKnown RBP19.24■□□□□ 0.67
UBR1-212ENST00000627960 HSPA2P54652 639 aa19.23■□□□□ 0.67
UBR1-212ENST00000627960 PREX1Q8TCU6 1659 aa19.23■□□□□ 0.67
UBR1-212ENST00000627960 MBD5Q9P267 1494 aa19.22■□□□□ 0.67
UBR1-212ENST00000627960 C3P01024 1663 aa19.21■□□□□ 0.67
UBR1-212ENST00000627960 ESF1Q9H501 851 aaKnown RBP19.21■□□□□ 0.67
UBR1-212ENST00000627960 ILDR1Q86SU0 546 aaPredicted RBP19.2■□□□□ 0.66
UBR1-212ENST00000627960 LRRC9Q6ZRR7 1453 aa19.2■□□□□ 0.66
UBR1-212ENST00000627960 A2MP01023 1474 aa19.19■□□□□ 0.66
UBR1-212ENST00000627960 ADGBQ8N7X0 1667 aa19.19■□□□□ 0.66
UBR1-212ENST00000627960 MAP3K1Q13233 1512 aa19.19■□□□□ 0.66
UBR1-212ENST00000627960 PLXNC1O60486 1568 aa19.19■□□□□ 0.66
UBR1-212ENST00000627960 CNTLNQ9NXG0 1405 aa19.17■□□□□ 0.66
UBR1-212ENST00000627960 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
UBR1-212ENST00000627960 CAMSAP2Q08AD1 1489 aa19.16■□□□□ 0.66
UBR1-212ENST00000627960 KANK4Q5T7N3 995 aaPredicted RBP19.15■□□□□ 0.66
UBR1-212ENST00000627960 RSPH4AQ5TD94 716 aa19.15■□□□□ 0.66
UBR1-212ENST00000627960 MROH2AA6NES4 1674 aa19.14■□□□□ 0.66
UBR1-212ENST00000627960 CCDC141Q6ZP82 1450 aa19.14■□□□□ 0.65
UBR1-212ENST00000627960 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
UBR1-212ENST00000627960 CLTCQ00610 1675 aaKnown RBP19.11■□□□□ 0.65
UBR1-212ENST00000627960 ARHGEF5Q12774 1597 aa19.11■□□□□ 0.65
UBR1-212ENST00000627960 ZMYM3Q14202 1370 aa19.1■□□□□ 0.65
UBR1-212ENST00000627960 DHX29Q7Z478 1369 aaKnown RBP19.1■□□□□ 0.65
UBR1-212ENST00000627960 GGT6Q6P531 493 aa19.1■□□□□ 0.65
UBR1-212ENST00000627960 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.64
UBR1-212ENST00000627960 STRCQ7RTU9 1775 aa19.08■□□□□ 0.64
UBR1-212ENST00000627960 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
UBR1-212ENST00000627960 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
UBR1-212ENST00000627960 NPATQ14207 1427 aa19.07■□□□□ 0.64
UBR1-212ENST00000627960 MYOM3Q5VTT5 1437 aa19.06■□□□□ 0.64
UBR1-212ENST00000627960 APLP2Q06481 763 aa19.05■□□□□ 0.64
UBR1-212ENST00000627960 MIA2Q96PC5 1412 aa19.05■□□□□ 0.64
UBR1-212ENST00000627960 FBXO41Q8TF61 875 aa19.03■□□□□ 0.64
UBR1-212ENST00000627960 KIF3BO15066 747 aa19.02■□□□□ 0.64
UBR1-212ENST00000627960 DMRT2Q9Y5R5 561 aa19.02■□□□□ 0.64
UBR1-212ENST00000627960 MAST1Q9Y2H9 1570 aa19.02■□□□□ 0.63
UBR1-212ENST00000627960 PTPRKQ15262 1439 aa19.01■□□□□ 0.63
UBR1-212ENST00000627960 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
UBR1-212ENST00000627960 FAM135AQ9P2D6 1515 aa18.96■□□□□ 0.63
UBR1-212ENST00000627960 ZNF142P52746 1687 aaPredicted RBP18.95■□□□□ 0.62
UBR1-212ENST00000627960 PTPRTO14522 1441 aa18.95■□□□□ 0.62
UBR1-212ENST00000627960 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms