RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 ZMYM4Q5VZL5 1548 aa19.05■□□□□ 0.64
CHRNA4-210ENST00000627869 FANCAO15360 1455 aa19.03■□□□□ 0.64
CHRNA4-210ENST00000627869 HECW1Q76N89 1606 aa19.03■□□□□ 0.64
CHRNA4-210ENST00000627869 TTC37Q6PGP7 1564 aa19.02■□□□□ 0.64
CHRNA4-210ENST00000627869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.02■□□□□ 0.64
CHRNA4-210ENST00000627869 FER1L4A9Z1Z3 1794 aa19.01■□□□□ 0.63
CHRNA4-210ENST00000627869 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
CHRNA4-210ENST00000627869 POGZQ7Z3K3 1410 aa19■□□□□ 0.63
CHRNA4-210ENST00000627869 STRCQ7RTU9 1775 aa18.98■□□□□ 0.63
CHRNA4-210ENST00000627869 MLECQ14165 292 aa18.98■□□□□ 0.63
CHRNA4-210ENST00000627869 CFAP74Q9C0B2 1584 aa18.97■□□□□ 0.63
CHRNA4-210ENST00000627869 PLCH2O75038 1416 aa18.96■□□□□ 0.63
CHRNA4-210ENST00000627869 PREX1Q8TCU6 1659 aa18.95■□□□□ 0.62
CHRNA4-210ENST00000627869 ARHGEF12Q9NZN5 1544 aa18.95■□□□□ 0.62
CHRNA4-210ENST00000627869 CLIP1P30622 1438 aa18.95■□□□□ 0.62
CHRNA4-210ENST00000627869 CASKIN1Q8WXD9 1431 aa18.95■□□□□ 0.62
CHRNA4-210ENST00000627869 TROQ12816 1431 aaPredicted RBP18.94■□□□□ 0.62
CHRNA4-210ENST00000627869 MAGI2Q86UL8 1455 aa18.94■□□□□ 0.62
CHRNA4-210ENST00000627869 EFCAB2Q5VUJ9 269 aa18.93■□□□□ 0.62
CHRNA4-210ENST00000627869 CEBPAP49715 358 aaPredicted RBP18.92■□□□□ 0.62
CHRNA4-210ENST00000627869 SPATA31D1Q6ZQQ2 1576 aa18.91■□□□□ 0.62
CHRNA4-210ENST00000627869 CCDC18Q5T9S5 1454 aa18.9■□□□□ 0.62
CHRNA4-210ENST00000627869 SCAPERQ9BY12 1400 aa18.89■□□□□ 0.61
CHRNA4-210ENST00000627869 KIF14Q15058 1648 aa18.87■□□□□ 0.61
CHRNA4-210ENST00000627869 FYCO1Q9BQS8 1478 aa18.87■□□□□ 0.61
CHRNA4-210ENST00000627869 ATP10AO60312 1499 aa18.86■□□□□ 0.61
CHRNA4-210ENST00000627869 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
CHRNA4-210ENST00000627869 C9orf84Q5VXU9 1444 aa18.84■□□□□ 0.61
CHRNA4-210ENST00000627869 LTBP4Q8N2S1 1624 aa18.82■□□□□ 0.6
CHRNA4-210ENST00000627869 ARHGAP5Q13017 1502 aa18.82■□□□□ 0.6
CHRNA4-210ENST00000627869 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
CHRNA4-210ENST00000627869 UHRF1BP1Q6BDS2 1440 aa18.8■□□□□ 0.6
CHRNA4-210ENST00000627869 PTPRTO14522 1441 aa18.79■□□□□ 0.6
CHRNA4-210ENST00000627869 LRRIQ1Q96JM4 1722 aa18.79■□□□□ 0.6
CHRNA4-210ENST00000627869 MYO5CQ9NQX4 1742 aa18.79■□□□□ 0.6
CHRNA4-210ENST00000627869 CEP162Q5TB80 1403 aa18.77■□□□□ 0.6
CHRNA4-210ENST00000627869 AFAP1Q8N556 730 aa18.77■□□□□ 0.6
CHRNA4-210ENST00000627869 SETD1BQ9UPS6 1966 aaKnown RBP18.77■□□□□ 0.59
CHRNA4-210ENST00000627869 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.59
CHRNA4-210ENST00000627869 C3P01024 1663 aa18.76■□□□□ 0.59
CHRNA4-210ENST00000627869 MYT1LQ9UL68 1186 aa18.75■□□□□ 0.59
CHRNA4-210ENST00000627869 KDM5CP41229 1560 aa18.75■□□□□ 0.59
CHRNA4-210ENST00000627869 DIP2CQ9Y2E4 1556 aa18.74■□□□□ 0.59
CHRNA4-210ENST00000627869 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
CHRNA4-210ENST00000627869 ZNF777Q9ULD5 760 aaPredicted RBP18.71■□□□□ 0.59
CHRNA4-210ENST00000627869 IQSEC2Q5JU85 1478 aa18.71■□□□□ 0.59
CHRNA4-210ENST00000627869 ABCA6Q8N139 1617 aa18.71■□□□□ 0.58
CHRNA4-210ENST00000627869 REREQ9P2R6 1566 aa18.7■□□□□ 0.58
CHRNA4-210ENST00000627869 NCOA1Q15788 1441 aa18.69■□□□□ 0.58
CHRNA4-210ENST00000627869 PREX2Q70Z35 1606 aa18.69■□□□□ 0.58
CHRNA4-210ENST00000627869 TRAPPC8Q9Y2L5 1435 aa18.68■□□□□ 0.58
CHRNA4-210ENST00000627869 CFDP1Q9UEE9 299 aaPredicted RBP18.68■□□□□ 0.58
CHRNA4-210ENST00000627869 GPATCH8Q9UKJ3 1502 aaKnown RBP18.68■□□□□ 0.58
CHRNA4-210ENST00000627869 CCNB3Q8WWL7 1395 aa18.68■□□□□ 0.58
CHRNA4-210ENST00000627869 CDC42BPBQ9Y5S2 1711 aa18.67■□□□□ 0.58
CHRNA4-210ENST00000627869 ABCC1P33527 1531 aa18.66■□□□□ 0.58
CHRNA4-210ENST00000627869 MLH3Q9UHC1 1453 aa18.65■□□□□ 0.58
CHRNA4-210ENST00000627869 AGLP35573 1532 aa18.63■□□□□ 0.57
CHRNA4-210ENST00000627869 HNRNPMP52272 730 aaKnown RBP eCLIP18.62■□□□□ 0.57
CHRNA4-210ENST00000627869 CAMSAP1Q5T5Y3 1602 aa18.61■□□□□ 0.57
CHRNA4-210ENST00000627869 CDC42BPAQ5VT25 1732 aa18.6■□□□□ 0.57
CHRNA4-210ENST00000627869 PLEKHH2Q8IVE3 1493 aa18.6■□□□□ 0.57
CHRNA4-210ENST00000627869 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
CHRNA4-210ENST00000627869 SPAG9O60271 1321 aaKnown RBP18.6■□□□□ 0.57
CHRNA4-210ENST00000627869 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
CHRNA4-210ENST00000627869 ZNF335Q9H4Z2 1342 aaPredicted RBP18.59■□□□□ 0.57
CHRNA4-210ENST00000627869 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.56
CHRNA4-210ENST00000627869 SYCP2Q9BX26 1530 aa18.58■□□□□ 0.56
CHRNA4-210ENST00000627869 KIDINS220Q9ULH0 1771 aa18.58■□□□□ 0.56
CHRNA4-210ENST00000627869 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
CHRNA4-210ENST00000627869 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
CHRNA4-210ENST00000627869 NCKAP5LQ9HCH0 1330 aa18.56■□□□□ 0.56
CHRNA4-210ENST00000627869 UBAP1LF5GYI3 381 aa18.55■□□□□ 0.56
CHRNA4-210ENST00000627869 ESF1Q9H501 851 aaKnown RBP18.55■□□□□ 0.56
CHRNA4-210ENST00000627869 ZNF644Q9H582 1327 aaPredicted RBP18.54■□□□□ 0.56
CHRNA4-210ENST00000627869 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
CHRNA4-210ENST00000627869 NPATQ14207 1427 aa18.53■□□□□ 0.56
CHRNA4-210ENST00000627869 CNTLNQ9NXG0 1405 aa18.53■□□□□ 0.56
CHRNA4-210ENST00000627869 TIAM1Q13009 1591 aa18.52■□□□□ 0.56
CHRNA4-210ENST00000627869 NCOA2Q15596 1464 aa18.51■□□□□ 0.55
CHRNA4-210ENST00000627869 ZNF142P52746 1687 aaPredicted RBP18.5■□□□□ 0.55
CHRNA4-210ENST00000627869 ZMYM3Q14202 1370 aa18.49■□□□□ 0.55
CHRNA4-210ENST00000627869 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
CHRNA4-210ENST00000627869 MED1Q15648 1581 aaPredicted RBP18.49■□□□□ 0.55
CHRNA4-210ENST00000627869 MYO3AQ8NEV4 1616 aa18.49■□□□□ 0.55
CHRNA4-210ENST00000627869 ATP7AQ04656 1500 aa18.48■□□□□ 0.55
CHRNA4-210ENST00000627869 MBD5Q9P267 1494 aa18.47■□□□□ 0.55
CHRNA4-210ENST00000627869 PLA2R1Q13018 1463 aa18.46■□□□□ 0.55
CHRNA4-210ENST00000627869 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
CHRNA4-210ENST00000627869 CLTCQ00610 1675 aaKnown RBP18.45■□□□□ 0.54
CHRNA4-210ENST00000627869 RSPH4AQ5TD94 716 aa18.45■□□□□ 0.54
CHRNA4-210ENST00000627869 CEP170BQ9Y4F5 1589 aaPredicted RBP18.45■□□□□ 0.54
CHRNA4-210ENST00000627869 SUPT6HQ7KZ85 1726 aaKnown RBP18.45■□□□□ 0.54
CHRNA4-210ENST00000627869 A2MP01023 1474 aa18.45■□□□□ 0.54
CHRNA4-210ENST00000627869 HSPA1LP34931 641 aa18.44■□□□□ 0.54
CHRNA4-210ENST00000627869 KANK4Q5T7N3 995 aaPredicted RBP18.44■□□□□ 0.54
CHRNA4-210ENST00000627869 RTEL1-TNFRSF6BF6WH68 1400 aa18.43■□□□□ 0.54
CHRNA4-210ENST00000627869 PTPRKQ15262 1439 aa18.43■□□□□ 0.54
CHRNA4-210ENST00000627869 MAP3K1Q13233 1512 aa18.43■□□□□ 0.54
CHRNA4-210ENST00000627869 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms