RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 ARAP3Q8WWN8 1544 aa29.2■■■□□ 2.27
MECP2-216ENST00000627864 CFAP74Q9C0B2 1584 aa29.2■■■□□ 2.26
MECP2-216ENST00000627864 FANCAO15360 1455 aa29.19■■■□□ 2.26
MECP2-216ENST00000627864 EFCAB2Q5VUJ9 269 aa29.19■■■□□ 2.26
MECP2-216ENST00000627864 CFDP1Q9UEE9 299 aaPredicted RBP29.15■■■□□ 2.26
MECP2-216ENST00000627864 NEO1Q92859 1461 aa29.15■■■□□ 2.26
MECP2-216ENST00000627864 ZNF777Q9ULD5 760 aaPredicted RBP29.13■■■□□ 2.25
MECP2-216ENST00000627864 AKNAQ7Z591 1439 aa29.12■■■□□ 2.25
MECP2-216ENST00000627864 PHLDB1Q86UU1 1377 aa29.12■■■□□ 2.25
MECP2-216ENST00000627864 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
MECP2-216ENST00000627864 KDM6BO15054 1643 aa29.08■■■□□ 2.25
MECP2-216ENST00000627864 SAMD9LQ8IVG5 1584 aa29.07■■■□□ 2.24
MECP2-216ENST00000627864 ADGRL1O94910 1474 aa29.05■■■□□ 2.24
MECP2-216ENST00000627864 MIA2Q96PC5 1412 aa29.03■■■□□ 2.24
MECP2-216ENST00000627864 ZNF644Q9H582 1327 aaPredicted RBP29.02■■■□□ 2.24
MECP2-216ENST00000627864 SCAPERQ9BY12 1400 aa29.02■■■□□ 2.24
MECP2-216ENST00000627864 COL17A1Q9UMD9 1497 aaPredicted RBP29.01■■■□□ 2.23
MECP2-216ENST00000627864 ABCC1P33527 1531 aa29■■■□□ 2.23
MECP2-216ENST00000627864 PTPN23Q9H3S7 1636 aa28.99■■■□□ 2.23
MECP2-216ENST00000627864 FGD6Q6ZV73 1430 aa28.99■■■□□ 2.23
MECP2-216ENST00000627864 CAMSAP2Q08AD1 1489 aa28.98■■■□□ 2.23
MECP2-216ENST00000627864 DENND4BO75064 1496 aaPredicted RBP28.97■■■□□ 2.23
MECP2-216ENST00000627864 PLEKHH2Q8IVE3 1493 aa28.97■■■□□ 2.23
MECP2-216ENST00000627864 RICTORQ6R327 1708 aa28.97■■■□□ 2.23
MECP2-216ENST00000627864 SYCP2Q9BX26 1530 aa28.96■■■□□ 2.23
MECP2-216ENST00000627864 ARHGEF12Q9NZN5 1544 aa28.96■■■□□ 2.23
MECP2-216ENST00000627864 HNRNPMP52272 730 aaKnown RBP eCLIP28.96■■■□□ 2.233e-7■■■■□ 24.6
MECP2-216ENST00000627864 RAPGEF3O95398 923 aa28.95■■■□□ 2.22
MECP2-216ENST00000627864 KIAA1107Q9UPP5 1409 aa28.92■■■□□ 2.22
MECP2-216ENST00000627864 FRMPD1Q5SYB0 1578 aa28.91■■■□□ 2.22
MECP2-216ENST00000627864 POGZQ7Z3K3 1410 aa28.89■■■□□ 2.22
MECP2-216ENST00000627864 TRAPPC8Q9Y2L5 1435 aa28.89■■■□□ 2.22
MECP2-216ENST00000627864 TCOF1Q13428 1488 aaKnown RBP28.89■■■□□ 2.22
MECP2-216ENST00000627864 FAM50AQ14320 339 aaKnown RBP28.88■■■□□ 2.21
MECP2-216ENST00000627864 AFAP1Q8N556 730 aa28.87■■■□□ 2.21
MECP2-216ENST00000627864 ZNF518AQ6AHZ1 1483 aa28.86■■■□□ 2.21
MECP2-216ENST00000627864 MBD5Q9P267 1494 aa28.85■■■□□ 2.21
MECP2-216ENST00000627864 ARHGEF5Q12774 1597 aa28.84■■■□□ 2.21
MECP2-216ENST00000627864 KDM5CP41229 1560 aa28.81■■■□□ 2.2
MECP2-216ENST00000627864 RSPH4AQ5TD94 716 aa28.81■■■□□ 2.2
MECP2-216ENST00000627864 CCDC141Q6ZP82 1450 aa28.8■■■□□ 2.2
MECP2-216ENST00000627864 MYT1LQ9UL68 1186 aa28.8■■■□□ 2.2
MECP2-216ENST00000627864 ZMYM4Q5VZL5 1548 aa28.79■■■□□ 2.2
MECP2-216ENST00000627864 RRBP1Q9P2E9 1410 aaKnown RBP28.79■■■□□ 2.2
MECP2-216ENST00000627864 DNMT1P26358 1616 aaKnown RBP28.78■■■□□ 2.2
MECP2-216ENST00000627864 HECW2Q9P2P5 1572 aa28.77■■■□□ 2.2
MECP2-216ENST00000627864 SPAG9O60271 1321 aaKnown RBP28.76■■■□□ 2.19
MECP2-216ENST00000627864 CROCC2H7BZ55 1655 aa28.76■■■□□ 2.19
MECP2-216ENST00000627864 KIDINS220Q9ULH0 1771 aa28.75■■■□□ 2.19
MECP2-216ENST00000627864 TSPY4P0CV99 314 aa28.74■■■□□ 2.19
MECP2-216ENST00000627864 TSPY10P0CW01 314 aa28.74■■■□□ 2.19
MECP2-216ENST00000627864 DAPK1P53355 1430 aa28.73■■■□□ 2.19
MECP2-216ENST00000627864 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.73■■■□□ 2.19
MECP2-216ENST00000627864 ABCC5O15440 1437 aa28.72■■■□□ 2.19
MECP2-216ENST00000627864 ZFYVE16Q7Z3T8 1539 aa28.72■■■□□ 2.19
MECP2-216ENST00000627864 MAGI2Q86UL8 1455 aa28.72■■■□□ 2.19
MECP2-216ENST00000627864 MLH3Q9UHC1 1453 aa28.72■■■□□ 2.19
MECP2-216ENST00000627864 INO80Q9ULG1 1556 aaPredicted RBP28.71■■■□□ 2.19
MECP2-216ENST00000627864 ATP7AQ04656 1500 aa28.7■■■□□ 2.19
MECP2-216ENST00000627864 ITGAEP38570 1179 aa28.69■■■□□ 2.18
MECP2-216ENST00000627864 YEATS2Q9ULM3 1422 aa28.69■■■□□ 2.18
MECP2-216ENST00000627864 MAST1Q9Y2H9 1570 aa28.67■■■□□ 2.18
MECP2-216ENST00000627864 ARHGEF40Q8TER5 1519 aa28.66■■■□□ 2.18
MECP2-216ENST00000627864 C9orf84Q5VXU9 1444 aa28.66■■■□□ 2.18
MECP2-216ENST00000627864 ABCA6Q8N139 1617 aa28.65■■■□□ 2.18
MECP2-216ENST00000627864 RTEL1-TNFRSF6BF6WH68 1400 aa28.65■■■□□ 2.18
MECP2-216ENST00000627864 CHIC2Q9UKJ5 165 aa28.64■■■□□ 2.18
MECP2-216ENST00000627864 SHANK2Q9UPX8 1470 aa28.64■■■□□ 2.17
MECP2-216ENST00000627864 DIP2CQ9Y2E4 1556 aa28.63■■■□□ 2.17
MECP2-216ENST00000627864 ADGBQ8N7X0 1667 aa28.63■■■□□ 2.17
MECP2-216ENST00000627864 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
MECP2-216ENST00000627864 ATP10AO60312 1499 aa28.59■■■□□ 2.17
MECP2-216ENST00000627864 PLXNC1O60486 1568 aa28.56■■■□□ 2.16
MECP2-216ENST00000627864 ANKRD30AQ9BXX3 1397 aa28.53■■■□□ 2.16
MECP2-216ENST00000627864 SIGLEC1Q9BZZ2 1709 aa28.52■■■□□ 2.16
MECP2-216ENST00000627864 RRP7BPQ9NSQ0 103 aa28.52■■■□□ 2.16
MECP2-216ENST00000627864 ADGRL2O95490 1459 aa28.52■■■□□ 2.16
MECP2-216ENST00000627864 A2MP01023 1474 aa28.51■■■□□ 2.15
MECP2-216ENST00000627864 NCOA1Q15788 1441 aa28.5■■■□□ 2.15
MECP2-216ENST00000627864 REREQ9P2R6 1566 aa28.5■■■□□ 2.15
MECP2-216ENST00000627864 ARID4BQ4LE39 1312 aaPredicted RBP28.48■■■□□ 2.15
MECP2-216ENST00000627864 KIF15Q9NS87 1388 aa28.48■■■□□ 2.15
MECP2-216ENST00000627864 ROCK1Q13464 1354 aa28.46■■■□□ 2.15
MECP2-216ENST00000627864 DHX29Q7Z478 1369 aaKnown RBP28.46■■■□□ 2.15
MECP2-216ENST00000627864 DUOX2Q9NRD8 1548 aa28.45■■■□□ 2.15
MECP2-216ENST00000627864 AGLP35573 1532 aa28.41■■■□□ 2.14
MECP2-216ENST00000627864 TRIM26Q12899 539 aaPredicted RBP28.37■■■□□ 2.13
MECP2-216ENST00000627864 MLECQ14165 292 aa28.37■■■□□ 2.13
MECP2-216ENST00000627864 BCORL1Q5H9F3 1711 aa28.37■■■□□ 2.13
MECP2-216ENST00000627864 EIF2AK4Q9P2K8 1649 aaKnown RBP28.36■■■□□ 2.13
MECP2-216ENST00000627864 GCC2Q8IWJ2 1684 aa28.36■■■□□ 2.13
MECP2-216ENST00000627864 KIF3BO15066 747 aa28.36■■■□□ 2.13
MECP2-216ENST00000627864 ERBINQ96RT1 1412 aa28.35■■■□□ 2.13
MECP2-216ENST00000627864 ANKRD50Q9ULJ7 1429 aa28.33■■■□□ 2.13
MECP2-216ENST00000627864 NAIPQ13075 1403 aa28.31■■■□□ 2.12
MECP2-216ENST00000627864 GGT6Q6P531 493 aa28.3■■■□□ 2.12
MECP2-216ENST00000627864 HFM1A2PYH4 1435 aa28.29■■■□□ 2.12
MECP2-216ENST00000627864 RNF17Q9BXT8 1623 aaKnown RBP28.27■■■□□ 2.12
MECP2-216ENST00000627864 ADAMTSL3P82987 1691 aa28.26■■■□□ 2.12
MECP2-216ENST00000627864 FER1L4A9Z1Z3 1794 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms