RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 STK26Q9P289 416 aa16.4■□□□□ 0.22
SCN8A-209ENST00000627620 ERICH6BQ5W0A0 696 aa16.39■□□□□ 0.21
SCN8A-209ENST00000627620 CCER2I3L3R5 266 aa16.38■□□□□ 0.21
SCN8A-209ENST00000627620 FOXD1Q16676 465 aa16.38■□□□□ 0.21
SCN8A-209ENST00000627620 RTF1Q92541 710 aaKnown RBP16.37■□□□□ 0.21
SCN8A-209ENST00000627620 HSCBQ8IWL3 235 aa16.37■□□□□ 0.21
SCN8A-209ENST00000627620 HDGFL2Q7Z4V5 671 aaPredicted RBP16.36■□□□□ 0.21
SCN8A-209ENST00000627620 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
SCN8A-209ENST00000627620 KANK4Q5T7N3 995 aaPredicted RBP16.35■□□□□ 0.21
SCN8A-209ENST00000627620 VPS8Q8N3P4 1428 aa16.34■□□□□ 0.21
SCN8A-209ENST00000627620 GOLGA6L6A8MZA4 724 aa16.34■□□□□ 0.21
SCN8A-209ENST00000627620 GOLGA6L4A6NEF3 574 aa16.33■□□□□ 0.21
SCN8A-209ENST00000627620 MCCP23508 829 aa16.33■□□□□ 0.2
SCN8A-209ENST00000627620 CARMIL2Q6F5E8 1435 aa16.33■□□□□ 0.2
SCN8A-209ENST00000627620 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
SCN8A-209ENST00000627620 ROCK2O75116 1388 aaKnown RBP16.3■□□□□ 0.2
SCN8A-209ENST00000627620 IPO8O15397 1037 aaKnown RBP16.3■□□□□ 0.2
SCN8A-209ENST00000627620 MPHOSPH9Q99550 1183 aa16.3■□□□□ 0.2
SCN8A-209ENST00000627620 U2AF1L5P0DN76 240 aaPredicted RBP16.29■□□□□ 0.2
SCN8A-209ENST00000627620 U2AF1Q01081 240 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCN8A-209ENST00000627620 SPRYD3Q8NCJ5 442 aa16.29■□□□□ 0.2
SCN8A-209ENST00000627620 NUP155O75694 1391 aa16.29■□□□□ 0.2
SCN8A-209ENST00000627620 APBB1O00213 710 aa16.29■□□□□ 0.2
SCN8A-209ENST00000627620 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
SCN8A-209ENST00000627620 NRDCO43847 1150 aa16.28■□□□□ 0.2
SCN8A-209ENST00000627620 RTN4Q9NQC3 1192 aaKnown RBP16.28■□□□□ 0.2
SCN8A-209ENST00000627620 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.2
SCN8A-209ENST00000627620 CFAP44Q96MT7 982 aa16.27■□□□□ 0.2
SCN8A-209ENST00000627620 RALBP1Q15311 655 aa16.26■□□□□ 0.19
SCN8A-209ENST00000627620 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
SCN8A-209ENST00000627620 RAB3GAP2Q9H2M9 1393 aa16.25■□□□□ 0.19
SCN8A-209ENST00000627620 CALD1Q05682 793 aaKnown RBP16.25■□□□□ 0.19
SCN8A-209ENST00000627620 ANKRD30AQ9BXX3 1397 aa16.25■□□□□ 0.19
SCN8A-209ENST00000627620 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
SCN8A-209ENST00000627620 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
SCN8A-209ENST00000627620 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
SCN8A-209ENST00000627620 FMN1Q68DA7 1419 aa16.24■□□□□ 0.19
SCN8A-209ENST00000627620 CSB-PGBD3P0DP91 1061 aa16.23■□□□□ 0.19
SCN8A-209ENST00000627620 ITPRIPQ8IWB1 547 aa16.23■□□□□ 0.19
SCN8A-209ENST00000627620 PDS5BQ9NTI5 1447 aa16.23■□□□□ 0.19
SCN8A-209ENST00000627620 KIAA1211Q6ZU35 1233 aa16.22■□□□□ 0.19
SCN8A-209ENST00000627620 RWDD1Q9H446 243 aaPredicted RBP16.21■□□□□ 0.19
SCN8A-209ENST00000627620 KIF3BO15066 747 aa16.2■□□□□ 0.18
SCN8A-209ENST00000627620 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
SCN8A-209ENST00000627620 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
SCN8A-209ENST00000627620 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
SCN8A-209ENST00000627620 MROH2BQ7Z745 1585 aa16.19■□□□□ 0.18
SCN8A-209ENST00000627620 GNL2Q13823 731 aaKnown RBP16.18■□□□□ 0.18
SCN8A-209ENST00000627620 L1TD1Q5T7N2 865 aaKnown RBP16.18■□□□□ 0.18
SCN8A-209ENST00000627620 HNRNPMP52272 730 aaKnown RBP eCLIP16.18■□□□□ 0.18
SCN8A-209ENST00000627620 RBM19Q9Y4C8 960 aaKnown RBP16.18■□□□□ 0.18
SCN8A-209ENST00000627620 DRC7Q8IY82 874 aa16.17■□□□□ 0.18
SCN8A-209ENST00000627620 CHAF1AQ13111 956 aaPredicted RBP16.17■□□□□ 0.18
SCN8A-209ENST00000627620 MSNP26038 577 aaKnown RBP16.16■□□□□ 0.18
SCN8A-209ENST00000627620 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
SCN8A-209ENST00000627620 TERF2IPQ9NYB0 399 aa16.16■□□□□ 0.18
SCN8A-209ENST00000627620 SPAG9O60271 1321 aaKnown RBP16.15■□□□□ 0.18
SCN8A-209ENST00000627620 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
SCN8A-209ENST00000627620 L3MBTL2Q969R5 705 aa16.15■□□□□ 0.18
SCN8A-209ENST00000627620 CLSTN1O94985 981 aa16.14■□□□□ 0.17
SCN8A-209ENST00000627620 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
SCN8A-209ENST00000627620 SMC4Q9NTJ3 1288 aa16.14■□□□□ 0.17
SCN8A-209ENST00000627620 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
SCN8A-209ENST00000627620 PMFBP1Q8TBY8 1022 aa16.12■□□□□ 0.17
SCN8A-209ENST00000627620 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
SCN8A-209ENST00000627620 GBP4Q96PP9 640 aa16.12■□□□□ 0.17
SCN8A-209ENST00000627620 CCDC146Q8IYE0 955 aa16.11■□□□□ 0.17
SCN8A-209ENST00000627620 WASHC2CQ9Y4E1 1318 aa16.11■□□□□ 0.17
SCN8A-209ENST00000627620 SLKQ9H2G2 1235 aaPredicted RBP16.1■□□□□ 0.17
SCN8A-209ENST00000627620 EID1Q9Y6B2 187 aa16.1■□□□□ 0.17
SCN8A-209ENST00000627620 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
SCN8A-209ENST00000627620 GORABQ5T7V8 394 aa16.09■□□□□ 0.17
SCN8A-209ENST00000627620 RSPH4AQ5TD94 716 aa16.09■□□□□ 0.17
SCN8A-209ENST00000627620 DEKP35659 375 aaKnown RBP16.09■□□□□ 0.17
SCN8A-209ENST00000627620 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
SCN8A-209ENST00000627620 CHMP3Q9Y3E7 222 aa16.09■□□□□ 0.17
SCN8A-209ENST00000627620 NLRP13Q86W25 1043 aa16.09■□□□□ 0.17
SCN8A-209ENST00000627620 CLUAP1Q96AJ1 413 aa16.09■□□□□ 0.17
SCN8A-209ENST00000627620 MFAP1P55081 439 aaKnown RBP16.08■□□□□ 0.16
SCN8A-209ENST00000627620 HMMRO75330 724 aa16.07■□□□□ 0.16
SCN8A-209ENST00000627620 PTMSP20962 102 aa16.07■□□□□ 0.16
SCN8A-209ENST00000627620 SLC4A10Q6U841 1118 aa16.07■□□□□ 0.16
SCN8A-209ENST00000627620 TRIM6-TRIM34B2RNG4 842 aa16.07■□□□□ 0.16
SCN8A-209ENST00000627620 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
SCN8A-209ENST00000627620 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
SCN8A-209ENST00000627620 RAPGEF2Q9Y4G8 1499 aa16.06■□□□□ 0.16
SCN8A-209ENST00000627620 HDAC5Q9UQL6 1122 aa16.06■□□□□ 0.16
SCN8A-209ENST00000627620 AMPHP49418 695 aa16.06■□□□□ 0.16
SCN8A-209ENST00000627620 TAF7LQ5H9L4 462 aa16.06■□□□□ 0.16
SCN8A-209ENST00000627620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCN8A-209ENST00000627620 GZF1Q9H116 711 aaPredicted RBP16.06■□□□□ 0.16
SCN8A-209ENST00000627620 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
SCN8A-209ENST00000627620 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
SCN8A-209ENST00000627620 HTATSF1O43719 755 aaKnown RBP16.05■□□□□ 0.16
SCN8A-209ENST00000627620 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
SCN8A-209ENST00000627620 TRAK1Q9UPV9 953 aa16.04■□□□□ 0.16
SCN8A-209ENST00000627620 NUTM2FA1L443 756 aa16.04■□□□□ 0.16
SCN8A-209ENST00000627620 LTV1Q96GA3 475 aaPredicted RBP16.04■□□□□ 0.16
SCN8A-209ENST00000627620 PDE3BQ13370 1112 aa16.03■□□□□ 0.16
SCN8A-209ENST00000627620 TMX4Q9H1E5 349 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms