RNA–Protein interactions for RNA: ENST00000627566.1

KCNIP4-IT1-201, KCNIP4 intronic transcript 1, humanhuman

BASIC

Gene KCNIP4-IT1, Length 9,848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-IT1-201ENST00000627566 RBM28Q9NW13 759 aaKnown RBP3.73□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 CUL7Q14999 1698 aa3.73□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 RIMS1Q86UR5 1692 aaKnown RBP3.73□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 NOM1Q5C9Z4 860 aaKnown RBP3.73□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 TMEM131LA2VDJ0 1609 aa3.73□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 HOXC8P31273 242 aa3.73□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 PAIP2Q9BPZ3 127 aaKnown RBP3.73□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 TRIM63Q969Q1 353 aa3.73□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 HMGB2P26583 209 aaKnown RBP3.72□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 DNTTIP2Q5QJE6 756 aaKnown RBP3.72□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 CASC1Q6TDU7 716 aa3.72□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 NAP1L2Q9ULW6 460 aaPredicted RBP3.72□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 ANKRD26Q9UPS8 1709 aa3.72□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 MSNP26038 577 aaKnown RBP3.72□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 THOC2Q8NI27 1593 aaKnown RBP3.72□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 NPM1P06748 294 aaKnown RBP eCLIP3.72□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 DDRGK1Q96HY6 314 aa3.72□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 PDILTQ8N807 584 aa3.71□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 TOP2AP11388 1531 aaKnown RBP3.71□□□□□ -1.81
KCNIP4-IT1-201ENST00000627566 CLGNO14967 610 aa3.71□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 OS9Q13438 667 aaPredicted RBP3.71□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CFAP44Q96MT7 982 aa3.71□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 FYB1O15117 783 aa3.71□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 IBSPP21815 317 aaPredicted RBP3.7□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CREBRFQ8IUR6 639 aa3.7□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 ANO8Q9HCE9 1232 aaPredicted RBP3.7□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 ACIN1Q9UKV3 1341 aaKnown RBP3.7□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 WDR70Q9NW82 654 aa3.7□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CCDC66A2RUB6 948 aa3.69□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 USP8P40818 1118 aa3.69□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 SAMD9Q5K651 1589 aa3.69□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 RYDENQ9NUL5 291 aaKnown RBP3.69□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CC2D1BQ5T0F9 858 aaKnown RBP3.69□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 TMX4Q9H1E5 349 aaPredicted RBP3.69□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 FAM193AP78312 1265 aa3.69□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 TARBP1Q13395 1621 aaKnown RBP3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 TUBGCP6Q96RT7 1819 aa3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 AK7Q96M32 723 aa3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 GCC2Q8IWJ2 1684 aa3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 MAP3K1Q13233 1512 aa3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 KLHL34Q8N239 644 aa3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 TMCO5BA8MYB1 307 aa3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 GORABQ5T7V8 394 aa3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CENPHQ9H3R5 247 aa3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 ISY1Q9ULR0 285 aaKnown RBP3.68□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 LAMB1P07942 1786 aa3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 AKAP12Q02952 1782 aa3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 PPP1R1BQ9UD71 204 aaPredicted RBP3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CRYBG1Q9Y4K1 1723 aa3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 ABCA6Q8N139 1617 aa3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 KCTD17Q8N5Z5 321 aa3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 E9PSI1 815 aa3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 TCERG1O14776 1098 aaKnown RBP3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 RSPH4AQ5TD94 716 aa3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CAGE1Q8TC20 777 aa3.67□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 LETM1O95202 739 aaPredicted RBP3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 SYNJ1O43426 1573 aa3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 SH3BGRP55822 239 aaPredicted RBP3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 RASSF8Q8NHQ8 419 aa3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 INO80Q9ULG1 1556 aaPredicted RBP3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 MRVI1Q9Y6F6 885 aa3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 LAMC3Q9Y6N6 1575 aa3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 MCCP23508 829 aa3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CTR9Q6PD62 1173 aa3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 EIF4G3O43432 1585 aaKnown RBP3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CCAR2Q8N163 923 aaKnown RBP3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 HTATSF1O43719 755 aaKnown RBP3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 FAM50AQ14320 339 aaKnown RBP3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 SPRYD3Q8NCJ5 442 aa3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 CWC15Q9P013 229 aaKnown RBP3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 ERICH3Q5RHP9 1530 aa3.66□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 HSP90AB3PQ58FF7 597 aa3.65□□□□□ -1.82
KCNIP4-IT1-201ENST00000627566 GOLGA6L10A6NI86 522 aa3.65□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 SRPK2P78362 688 aaKnown RBP3.65□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 SARNPP82979 210 aaKnown RBP3.65□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 GPS2Q13227 327 aa3.65□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 NOL8Q76FK4 1167 aaKnown RBP3.65□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 SENP3Q9H4L4 574 aaPredicted RBP3.65□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 NAP1L4Q99733 375 aaKnown RBP3.65□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 PSMA4P25789 261 aaKnown RBP3.65□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 CCAR1Q8IX12 1150 aaKnown RBP3.65□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 KIAA1210Q9ULL0 1709 aa3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 ADGBQ8N7X0 1667 aa3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 MNS1Q8NEH6 495 aa3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 SRRTQ9BXP5 876 aaKnown RBP3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 HMMRO75330 724 aa3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 ZRSR1Q15695 479 aaKnown RBP3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 PAF1Q8N7H5 531 aa3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 DEPDC5O75140 1603 aa3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 BECN1Q14457 450 aa3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 SMYD5Q6GMV2 418 aa3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 POLR3GO15318 223 aaPredicted RBP3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 CCDC97Q96F63 343 aaPredicted RBP3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 TIMELESSQ9UNS1 1208 aa3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 DZIP1Q86YF9 867 aaKnown RBP3.64□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 CCP110O43303 1012 aa3.63□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 LIG1P18858 919 aa3.63□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 UBE2Q2Q8WVN8 375 aa3.63□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 ZRANB2O95218 330 aaKnown RBP eCLIP3.63□□□□□ -1.83
KCNIP4-IT1-201ENST00000627566 RDXP35241 583 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms