RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 EFCAB3Q8N7B9 438 aa10.42□□□□□ -0.74
PTP4A2-220ENST00000627328 IRX2Q9BZI1 471 aaPredicted RBP10.41□□□□□ -0.74
PTP4A2-220ENST00000627328 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.74
PTP4A2-220ENST00000627328 ADGRD1Q6QNK2 874 aa10.36□□□□□ -0.75
PTP4A2-220ENST00000627328 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
PTP4A2-220ENST00000627328 SOX12O15370 315 aa10.34□□□□□ -0.75
PTP4A2-220ENST00000627328 VASPP50552 380 aaPredicted RBP10.33□□□□□ -0.76
PTP4A2-220ENST00000627328 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
PTP4A2-220ENST00000627328 CIZ1Q9ULV3 898 aaPredicted RBP10.32□□□□□ -0.76
PTP4A2-220ENST00000627328 NUDT7P0C024 238 aa10.31□□□□□ -0.76
PTP4A2-220ENST00000627328 TK2O00142 265 aa10.3□□□□□ -0.76
PTP4A2-220ENST00000627328 ARHGAP33O14559 1287 aa10.3□□□□□ -0.76
PTP4A2-220ENST00000627328 LHX6Q9UPM6 363 aa10.3□□□□□ -0.76
PTP4A2-220ENST00000627328 IFFO2Q5TF58 517 aa10.28□□□□□ -0.76
PTP4A2-220ENST00000627328 PSDA5PKW4 1024 aaPredicted RBP10.26□□□□□ -0.77
PTP4A2-220ENST00000627328 KCTD12Q96CX2 325 aaKnown RBP10.25□□□□□ -0.77
PTP4A2-220ENST00000627328 MS4A4AQ96JQ5 239 aa10.25□□□□□ -0.77
PTP4A2-220ENST00000627328 STAC3Q96MF2 364 aa10.25□□□□□ -0.77
PTP4A2-220ENST00000627328 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
PTP4A2-220ENST00000627328 HRO43593 1189 aa10.23□□□□□ -0.77
PTP4A2-220ENST00000627328 TRIM41Q8WV44 630 aa10.22□□□□□ -0.77
PTP4A2-220ENST00000627328 SLC34A2O95436 690 aa10.21□□□□□ -0.77
PTP4A2-220ENST00000627328 PHF8Q9UPP1 1060 aa10.2□□□□□ -0.78
PTP4A2-220ENST00000627328 PCDHGA4Q9Y5G9 962 aa10.2□□□□□ -0.78
PTP4A2-220ENST00000627328 A0A0G2JS52 829 aa10.18□□□□□ -0.78
PTP4A2-220ENST00000627328 KIF3CO14782 793 aa10.15□□□□□ -0.78
PTP4A2-220ENST00000627328 PTPN5P54829 565 aa10.13□□□□□ -0.79
PTP4A2-220ENST00000627328 NLRP6P59044 892 aa10.13□□□□□ -0.79
PTP4A2-220ENST00000627328 DMRTA1Q5VZB9 504 aa10.13□□□□□ -0.79
PTP4A2-220ENST00000627328 Q6ZNB5 142 aa10.13□□□□□ -0.79
PTP4A2-220ENST00000627328 C2orf72A6NCS6 295 aa10.12□□□□□ -0.79
PTP4A2-220ENST00000627328 PSEN2P49810 448 aa10.1□□□□□ -0.79
PTP4A2-220ENST00000627328 KCNH8Q96L42 1107 aa10.08□□□□□ -0.8
PTP4A2-220ENST00000627328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.06□□□□□ -0.8
PTP4A2-220ENST00000627328 ZFP91Q96JP5 570 aaPredicted RBP10.06□□□□□ -0.8
PTP4A2-220ENST00000627328 RIOK3O14730 519 aaKnown RBP10.05□□□□□ -0.8
PTP4A2-220ENST00000627328 VGFO15240 615 aaPredicted RBP10.05□□□□□ -0.8
PTP4A2-220ENST00000627328 PPP4R3BQ5MIZ7 849 aa10.05□□□□□ -0.8
PTP4A2-220ENST00000627328 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
PTP4A2-220ENST00000627328 FBXO22Q8NEZ5 403 aa10.02□□□□□ -0.81
PTP4A2-220ENST00000627328 TMC2Q8TDI7 906 aa10.02□□□□□ -0.81
PTP4A2-220ENST00000627328 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
PTP4A2-220ENST00000627328 KDM4FA0A1W2PPD8 638 aa9.99□□□□□ -0.81
PTP4A2-220ENST00000627328 LAPTM4AQ15012 233 aa9.99□□□□□ -0.81
PTP4A2-220ENST00000627328 VPS9D1Q9Y2B5 631 aa9.99□□□□□ -0.81
PTP4A2-220ENST00000627328 GOLGA8CPA6NN73 597 aa9.97□□□□□ -0.81
PTP4A2-220ENST00000627328 PTCD2Q8WV60 388 aaKnown RBP9.96□□□□□ -0.82
PTP4A2-220ENST00000627328 KCNK17Q96T54 332 aa9.96□□□□□ -0.82
PTP4A2-220ENST00000627328 SLC4A5Q9BY07 1137 aa9.94□□□□□ -0.82
PTP4A2-220ENST00000627328 WNT2BQ93097 391 aa9.93□□□□□ -0.82
PTP4A2-220ENST00000627328 RNF25Q96BH1 459 aaPredicted RBP9.91□□□□□ -0.82
PTP4A2-220ENST00000627328 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
PTP4A2-220ENST00000627328 TRAF7Q6Q0C0 670 aa9.9□□□□□ -0.82
PTP4A2-220ENST00000627328 TBC1D12O60347 775 aa9.89□□□□□ -0.83
PTP4A2-220ENST00000627328 MFRPQ9BY79 579 aa9.89□□□□□ -0.83
PTP4A2-220ENST00000627328 BHMG1C9JSJ3 638 aaPredicted RBP9.88□□□□□ -0.83
PTP4A2-220ENST00000627328 ITGBL1O95965 494 aaPredicted RBP9.88□□□□□ -0.83
PTP4A2-220ENST00000627328 MRPL50Q8N5N7 158 aaKnown RBP9.87□□□□□ -0.83
PTP4A2-220ENST00000627328 BCL11BQ9C0K0 894 aaPredicted RBP9.87□□□□□ -0.83
PTP4A2-220ENST00000627328 STK24Q9Y6E0 443 aa9.83□□□□□ -0.84
PTP4A2-220ENST00000627328 NBPF3Q9H094 633 aa9.82□□□□□ -0.84
PTP4A2-220ENST00000627328 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
PTP4A2-220ENST00000627328 LCE2BO14633 110 aa9.8□□□□□ -0.84
PTP4A2-220ENST00000627328 GFRA3O60609 400 aa9.8□□□□□ -0.84
PTP4A2-220ENST00000627328 PTPREP23469 700 aa9.78□□□□□ -0.84
PTP4A2-220ENST00000627328 FOXK1P85037 733 aa9.78□□□□□ -0.84
PTP4A2-220ENST00000627328 PLPP6Q8IY26 295 aa9.77□□□□□ -0.85
PTP4A2-220ENST00000627328 ZBED2Q9BTP6 218 aa9.77□□□□□ -0.85
PTP4A2-220ENST00000627328 NYAP1Q6ZVC0 841 aa9.76□□□□□ -0.85
PTP4A2-220ENST00000627328 ZNF454Q8N9F8 522 aa9.76□□□□□ -0.85
PTP4A2-220ENST00000627328 KCNC4Q03721 635 aa9.75□□□□□ -0.85
PTP4A2-220ENST00000627328 ANKK1Q8NFD2 765 aa9.74□□□□□ -0.85
PTP4A2-220ENST00000627328 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
PTP4A2-220ENST00000627328 STK25O00506 426 aa9.71□□□□□ -0.86
PTP4A2-220ENST00000627328 NRG2O14511 850 aaPredicted RBP9.71□□□□□ -0.86
PTP4A2-220ENST00000627328 GPHNQ9NQX3 736 aaPredicted RBP9.68□□□□□ -0.86
PTP4A2-220ENST00000627328 FOSBP53539 338 aa9.66□□□□□ -0.86
PTP4A2-220ENST00000627328 ZNF775Q96BV0 537 aaPredicted RBP9.66□□□□□ -0.86
PTP4A2-220ENST00000627328 DSG2Q14126 1118 aa9.64□□□□□ -0.87
PTP4A2-220ENST00000627328 SOWAHBA6NEL2 793 aa9.63□□□□□ -0.87
PTP4A2-220ENST00000627328 OXER1Q8TDS5 423 aa9.63□□□□□ -0.87
PTP4A2-220ENST00000627328 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
PTP4A2-220ENST00000627328 PPP1R37O75864 691 aa9.62□□□□□ -0.87
PTP4A2-220ENST00000627328 BCAMP50895 628 aa9.62□□□□□ -0.87
PTP4A2-220ENST00000627328 ECM2O94769 699 aaPredicted RBP9.61□□□□□ -0.87
PTP4A2-220ENST00000627328 LAPTM4BQ86VI4 370 aa9.61□□□□□ -0.87
PTP4A2-220ENST00000627328 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
PTP4A2-220ENST00000627328 PKD2Q13563 968 aa9.6□□□□□ -0.87
PTP4A2-220ENST00000627328 ZDHHC16Q969W1 377 aa9.6□□□□□ -0.87
PTP4A2-220ENST00000627328 PRKD2Q9BZL6 878 aa9.58□□□□□ -0.88
PTP4A2-220ENST00000627328 UPF1Q92900 1129 aaKnown RBP eCLIP9.57□□□□□ -0.887e-10■□□□□ 8.5
PTP4A2-220ENST00000627328 WBP1LQ9NX94 342 aa9.57□□□□□ -0.88
PTP4A2-220ENST00000627328 PPP1R3GB7ZBB8 358 aa9.56□□□□□ -0.88
PTP4A2-220ENST00000627328 V9GY48 417 aaPredicted RBP9.56□□□□□ -0.88
PTP4A2-220ENST00000627328 ADAM33Q9BZ11 813 aa9.55□□□□□ -0.88
PTP4A2-220ENST00000627328 ANO8Q9HCE9 1232 aaPredicted RBP9.54□□□□□ -0.88
PTP4A2-220ENST00000627328 ZFRQ96KR1 1074 aaKnown RBP9.53□□□□□ -0.88
PTP4A2-220ENST00000627328 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
PTP4A2-220ENST00000627328 TSR3Q9UJK0 312 aaKnown RBP9.5□□□□□ -0.89
PTP4A2-220ENST00000627328 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms