RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 FRMPD1Q5SYB0 1578 aa29.69■■■□□ 2.34
CNOT9-209ENST00000627282 DENND4BO75064 1496 aaPredicted RBP29.67■■■□□ 2.34
CNOT9-209ENST00000627282 SUPT6HQ7KZ85 1726 aaKnown RBP29.66■■■□□ 2.34
CNOT9-209ENST00000627282 NCOA2Q15596 1464 aa29.66■■■□□ 2.34
CNOT9-209ENST00000627282 KDM4FA0A1W2PPD8 638 aa29.63■■■□□ 2.33
CNOT9-209ENST00000627282 EFCAB2Q5VUJ9 269 aa29.63■■■□□ 2.33
CNOT9-209ENST00000627282 ADGRL1O94910 1474 aa29.62■■■□□ 2.33
CNOT9-209ENST00000627282 RICTORQ6R327 1708 aa29.62■■■□□ 2.33
CNOT9-209ENST00000627282 GPATCH8Q9UKJ3 1502 aaKnown RBP29.6■■■□□ 2.33
CNOT9-209ENST00000627282 ARHGAP5Q13017 1502 aa29.6■■■□□ 2.33
CNOT9-209ENST00000627282 CCNB3Q8WWL7 1395 aa29.59■■■□□ 2.33
CNOT9-209ENST00000627282 CDC42BPAQ5VT25 1732 aa29.58■■■□□ 2.33
CNOT9-209ENST00000627282 PPARGC1BQ86YN6 1023 aaKnown RBP29.57■■■□□ 2.32
CNOT9-209ENST00000627282 SCAPERQ9BY12 1400 aa29.57■■■□□ 2.32
CNOT9-209ENST00000627282 PREX2Q70Z35 1606 aa29.57■■■□□ 2.32
CNOT9-209ENST00000627282 CDC42BPBQ9Y5S2 1711 aa29.55■■■□□ 2.32
CNOT9-209ENST00000627282 POGZQ7Z3K3 1410 aa29.54■■■□□ 2.32
CNOT9-209ENST00000627282 PCGF6Q9BYE7 350 aa29.54■■■□□ 2.32
CNOT9-209ENST00000627282 ZMYM4Q5VZL5 1548 aa29.54■■■□□ 2.32
CNOT9-209ENST00000627282 ARHGEF40Q8TER5 1519 aa29.51■■■□□ 2.31
CNOT9-209ENST00000627282 TRIM26Q12899 539 aaPredicted RBP29.5■■■□□ 2.31
CNOT9-209ENST00000627282 ITSN2Q9NZM3 1697 aa29.48■■■□□ 2.31
CNOT9-209ENST00000627282 CFDP1Q9UEE9 299 aaPredicted RBP29.48■■■□□ 2.31
CNOT9-209ENST00000627282 MAGI2Q86UL8 1455 aa29.47■■■□□ 2.31
CNOT9-209ENST00000627282 MYOM3Q5VTT5 1437 aa29.46■■■□□ 2.31
CNOT9-209ENST00000627282 ZNF518AQ6AHZ1 1483 aa29.44■■■□□ 2.3
CNOT9-209ENST00000627282 ZFYVE16Q7Z3T8 1539 aa29.43■■■□□ 2.3
CNOT9-209ENST00000627282 ABCC1P33527 1531 aa29.43■■■□□ 2.3
CNOT9-209ENST00000627282 ZNF777Q9ULD5 760 aaPredicted RBP29.42■■■□□ 2.3
CNOT9-209ENST00000627282 YEATS2Q9ULM3 1422 aa29.41■■■□□ 2.3
CNOT9-209ENST00000627282 SAMD9LQ8IVG5 1584 aa29.4■■■□□ 2.3
CNOT9-209ENST00000627282 ZNF644Q9H582 1327 aaPredicted RBP29.39■■■□□ 2.3
CNOT9-209ENST00000627282 KDM5CP41229 1560 aa29.39■■■□□ 2.3
CNOT9-209ENST00000627282 ARHGEF12Q9NZN5 1544 aa29.38■■■□□ 2.29
CNOT9-209ENST00000627282 MIA2Q96PC5 1412 aa29.37■■■□□ 2.29
CNOT9-209ENST00000627282 AFAP1Q8N556 730 aa29.37■■■□□ 2.29
CNOT9-209ENST00000627282 FGD6Q6ZV73 1430 aa29.34■■■□□ 2.29
CNOT9-209ENST00000627282 TRAPPC8Q9Y2L5 1435 aa29.34■■■□□ 2.29
CNOT9-209ENST00000627282 CAMSAP2Q08AD1 1489 aa29.33■■■□□ 2.29
CNOT9-209ENST00000627282 ARID4BQ4LE39 1312 aaPredicted RBP29.32■■■□□ 2.28
CNOT9-209ENST00000627282 HECW2Q9P2P5 1572 aa29.31■■■□□ 2.28
CNOT9-209ENST00000627282 SYCP2Q9BX26 1530 aa29.3■■■□□ 2.28
CNOT9-209ENST00000627282 KIAA1107Q9UPP5 1409 aa29.3■■■□□ 2.28
CNOT9-209ENST00000627282 PLEKHH2Q8IVE3 1493 aa29.3■■■□□ 2.28
CNOT9-209ENST00000627282 ATP10AO60312 1499 aa29.29■■■□□ 2.28
CNOT9-209ENST00000627282 BCORL1Q5H9F3 1711 aa29.29■■■□□ 2.28
CNOT9-209ENST00000627282 ADAMTSL3P82987 1691 aa29.29■■■□□ 2.28
CNOT9-209ENST00000627282 MLH3Q9UHC1 1453 aa29.29■■■□□ 2.28
CNOT9-209ENST00000627282 HNRNPMP52272 730 aaKnown RBP eCLIP29.27■■■□□ 2.28
CNOT9-209ENST00000627282 PTPN23Q9H3S7 1636 aa29.27■■■□□ 2.28
CNOT9-209ENST00000627282 SIGLEC1Q9BZZ2 1709 aa29.27■■■□□ 2.28
CNOT9-209ENST00000627282 MBD5Q9P267 1494 aa29.26■■■□□ 2.27
CNOT9-209ENST00000627282 C9orf84Q5VXU9 1444 aa29.25■■■□□ 2.27
CNOT9-209ENST00000627282 TCOF1Q13428 1488 aaKnown RBP29.25■■■□□ 2.27
CNOT9-209ENST00000627282 DIP2CQ9Y2E4 1556 aa29.22■■■□□ 2.27
CNOT9-209ENST00000627282 MYT1LQ9UL68 1186 aa29.22■■■□□ 2.27
CNOT9-209ENST00000627282 ABCA6Q8N139 1617 aa29.2■■■□□ 2.26
CNOT9-209ENST00000627282 MADDQ8WXG6 1647 aa29.19■■■□□ 2.26
CNOT9-209ENST00000627282 KIDINS220Q9ULH0 1771 aa29.18■■■□□ 2.26
CNOT9-209ENST00000627282 REREQ9P2R6 1566 aa29.17■■■□□ 2.26
CNOT9-209ENST00000627282 RRBP1Q9P2E9 1410 aaKnown RBP29.16■■■□□ 2.26
CNOT9-209ENST00000627282 ARHGEF5Q12774 1597 aa29.16■■■□□ 2.26
CNOT9-209ENST00000627282 PTPRMP28827 1452 aa29.15■■■□□ 2.26
CNOT9-209ENST00000627282 FAM50AQ14320 339 aaKnown RBP29.15■■■□□ 2.26
CNOT9-209ENST00000627282 CCDC141Q6ZP82 1450 aa29.14■■■□□ 2.26
CNOT9-209ENST00000627282 SPAG9O60271 1321 aaKnown RBP29.14■■■□□ 2.26
CNOT9-209ENST00000627282 RSPH4AQ5TD94 716 aa29.12■■■□□ 2.25
CNOT9-209ENST00000627282 INO80Q9ULG1 1556 aaPredicted RBP29.11■■■□□ 2.25
CNOT9-209ENST00000627282 MLECQ14165 292 aa29.1■■■□□ 2.25
CNOT9-209ENST00000627282 ATP7AQ04656 1500 aa29.1■■■□□ 2.25
CNOT9-209ENST00000627282 ABCC5O15440 1437 aa29.09■■■□□ 2.25
CNOT9-209ENST00000627282 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.09■■■□□ 2.25
CNOT9-209ENST00000627282 RIMS1Q86UR5 1692 aaKnown RBP29.08■■■□□ 2.25
CNOT9-209ENST00000627282 DNMT1P26358 1616 aaKnown RBP29.08■■■□□ 2.25
CNOT9-209ENST00000627282 AGLP35573 1532 aa29.07■■■□□ 2.24
CNOT9-209ENST00000627282 DAPK1P53355 1430 aa29.06■■■□□ 2.24
CNOT9-209ENST00000627282 FER1L4A9Z1Z3 1794 aa29.04■■■□□ 2.24
CNOT9-209ENST00000627282 TSPY4P0CV99 314 aa29.02■■■□□ 2.24
CNOT9-209ENST00000627282 TSPY10P0CW01 314 aa29.02■■■□□ 2.24
CNOT9-209ENST00000627282 CROCC2H7BZ55 1655 aa29.01■■■□□ 2.23
CNOT9-209ENST00000627282 RTEL1-TNFRSF6BF6WH68 1400 aa29.01■■■□□ 2.23
CNOT9-209ENST00000627282 SHANK2Q9UPX8 1470 aa29■■■□□ 2.23
CNOT9-209ENST00000627282 MAST1Q9Y2H9 1570 aa29■■■□□ 2.23
CNOT9-209ENST00000627282 PTPRKQ15262 1439 aa28.99■■■□□ 2.23
CNOT9-209ENST00000627282 PLXNC1O60486 1568 aa28.97■■■□□ 2.23
CNOT9-209ENST00000627282 HRCP23327 699 aa28.97■■■□□ 2.23
CNOT9-209ENST00000627282 A2MP01023 1474 aa28.97■■■□□ 2.23
CNOT9-209ENST00000627282 ADGBQ8N7X0 1667 aa28.94■■■□□ 2.22
CNOT9-209ENST00000627282 ITGAEP38570 1179 aa28.94■■■□□ 2.22
CNOT9-209ENST00000627282 CHIC2Q9UKJ5 165 aa28.93■■■□□ 2.22
CNOT9-209ENST00000627282 ADGRL2O95490 1459 aa28.88■■■□□ 2.21
CNOT9-209ENST00000627282 PLPPR3Q6T4P5 718 aa28.87■■■□□ 2.21
CNOT9-209ENST00000627282 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
CNOT9-209ENST00000627282 DHX29Q7Z478 1369 aaKnown RBP28.85■■■□□ 2.21
CNOT9-209ENST00000627282 ANKRD30AQ9BXX3 1397 aa28.84■■■□□ 2.21
CNOT9-209ENST00000627282 RRP7BPQ9NSQ0 103 aa28.83■■■□□ 2.21
CNOT9-209ENST00000627282 KIF15Q9NS87 1388 aa28.83■■■□□ 2.21
CNOT9-209ENST00000627282 ESF1Q9H501 851 aaKnown RBP28.83■■■□□ 2.21
CNOT9-209ENST00000627282 CNTLNQ9NXG0 1405 aa28.83■■■□□ 2.2
CNOT9-209ENST00000627282 ROCK1Q13464 1354 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms