RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 DIEXFQ68CQ4 756 aaKnown RBP12.54□□□□□ -0.4
CHD2-209ENST00000627185 THOC2Q8NI27 1593 aaKnown RBP12.53□□□□□ -0.4
CHD2-209ENST00000627185 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
CHD2-209ENST00000627185 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
CHD2-209ENST00000627185 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.41
CHD2-209ENST00000627185 SAMD9Q5K651 1589 aa12.51□□□□□ -0.41
CHD2-209ENST00000627185 NESP48681 1621 aa12.51□□□□□ -0.41
CHD2-209ENST00000627185 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
CHD2-209ENST00000627185 PYGBP11216 843 aa12.5□□□□□ -0.41
CHD2-209ENST00000627185 TIMELESSQ9UNS1 1208 aa12.5□□□□□ -0.41
CHD2-209ENST00000627185 GAPVD1Q14C86 1478 aa12.5□□□□□ -0.41
CHD2-209ENST00000627185 CTTNBP2Q8WZ74 1663 aa12.49□□□□□ -0.41
CHD2-209ENST00000627185 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
CHD2-209ENST00000627185 HS6ST3Q8IZP7 471 aa12.48□□□□□ -0.41
CHD2-209ENST00000627185 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
CHD2-209ENST00000627185 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
CHD2-209ENST00000627185 TTBK1Q5TCY1 1321 aaPredicted RBP12.47□□□□□ -0.41
CHD2-209ENST00000627185 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
CHD2-209ENST00000627185 PCF11O94913 1555 aaKnown RBP12.46□□□□□ -0.42
CHD2-209ENST00000627185 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
CHD2-209ENST00000627185 CCDC61Q9Y6R9 512 aa12.45□□□□□ -0.42
CHD2-209ENST00000627185 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
CHD2-209ENST00000627185 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
CHD2-209ENST00000627185 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
CHD2-209ENST00000627185 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
CHD2-209ENST00000627185 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
CHD2-209ENST00000627185 CENPBP07199 599 aaPredicted RBP12.42□□□□□ -0.42
CHD2-209ENST00000627185 DNAJC5Q9H3Z4 198 aa12.42□□□□□ -0.42
CHD2-209ENST00000627185 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
CHD2-209ENST00000627185 GRIN2BQ13224 1484 aa12.41□□□□□ -0.42
CHD2-209ENST00000627185 MRC2Q9UBG0 1479 aa12.4□□□□□ -0.42
CHD2-209ENST00000627185 RAB3GAP2Q9H2M9 1393 aa12.4□□□□□ -0.42
CHD2-209ENST00000627185 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.43
CHD2-209ENST00000627185 FHOD3Q2V2M9 1422 aa12.39□□□□□ -0.43
CHD2-209ENST00000627185 ARHGEF11O15085 1522 aa12.39□□□□□ -0.43
CHD2-209ENST00000627185 RANGAP1P46060 587 aaPredicted RBP12.38□□□□□ -0.43
CHD2-209ENST00000627185 ZNF467Q7Z7K2 595 aaPredicted RBP12.38□□□□□ -0.43
CHD2-209ENST00000627185 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
CHD2-209ENST00000627185 MAPKBP1O60336 1514 aa12.37□□□□□ -0.43
CHD2-209ENST00000627185 FGD6Q6ZV73 1430 aa12.37□□□□□ -0.43
CHD2-209ENST00000627185 TDRD9Q8NDG6 1382 aaKnown RBP12.36□□□□□ -0.43
CHD2-209ENST00000627185 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
CHD2-209ENST00000627185 WDR62O43379 1518 aa12.36□□□□□ -0.43
CHD2-209ENST00000627185 EHBP1L1Q8N3D4 1523 aa12.36□□□□□ -0.43
CHD2-209ENST00000627185 UGGT2Q9NYU1 1516 aa12.36□□□□□ -0.43
CHD2-209ENST00000627185 AKNAQ7Z591 1439 aa12.36□□□□□ -0.43
CHD2-209ENST00000627185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.35□□□□□ -0.43
CHD2-209ENST00000627185 STK25O00506 426 aa12.35□□□□□ -0.43
CHD2-209ENST00000627185 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
CHD2-209ENST00000627185 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
CHD2-209ENST00000627185 CD44P16070 742 aaKnown RBP12.34□□□□□ -0.43
CHD2-209ENST00000627185 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
CHD2-209ENST00000627185 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
CHD2-209ENST00000627185 HFM1A2PYH4 1435 aa12.34□□□□□ -0.43
CHD2-209ENST00000627185 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.44
CHD2-209ENST00000627185 MYOM3Q5VTT5 1437 aa12.32□□□□□ -0.44
CHD2-209ENST00000627185 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
CHD2-209ENST00000627185 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
CHD2-209ENST00000627185 IQGAP2Q13576 1575 aa12.31□□□□□ -0.44
CHD2-209ENST00000627185 MIA2Q96PC5 1412 aa12.31□□□□□ -0.44
CHD2-209ENST00000627185 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
CHD2-209ENST00000627185 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
CHD2-209ENST00000627185 KIF12Q96FN5 646 aa12.3□□□□□ -0.44
CHD2-209ENST00000627185 BCL11BQ9C0K0 894 aaPredicted RBP12.3□□□□□ -0.44
CHD2-209ENST00000627185 KIAA0586Q9BVV6 1533 aa12.3□□□□□ -0.44
CHD2-209ENST00000627185 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
CHD2-209ENST00000627185 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
CHD2-209ENST00000627185 PDAP1Q13442 181 aaKnown RBP12.29□□□□□ -0.44
CHD2-209ENST00000627185 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
CHD2-209ENST00000627185 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
CHD2-209ENST00000627185 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
CHD2-209ENST00000627185 HECW1Q76N89 1606 aa12.29□□□□□ -0.44
CHD2-209ENST00000627185 NCOA2Q15596 1464 aa12.28□□□□□ -0.44
CHD2-209ENST00000627185 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
CHD2-209ENST00000627185 STK24Q9Y6E0 443 aa12.28□□□□□ -0.44
CHD2-209ENST00000627185 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
CHD2-209ENST00000627185 UACAQ9BZF9 1416 aa12.28□□□□□ -0.44
CHD2-209ENST00000627185 MAP3K13O43283 966 aa12.27□□□□□ -0.45
CHD2-209ENST00000627185 NEUROD1Q13562 356 aa12.26□□□□□ -0.45
CHD2-209ENST00000627185 POTEHQ6S545 545 aa12.25□□□□□ -0.45
CHD2-209ENST00000627185 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
CHD2-209ENST00000627185 EPRSP07814 1512 aaKnown RBP12.24□□□□□ -0.45
CHD2-209ENST00000627185 MAGI1Q96QZ7 1491 aaPredicted RBP12.24□□□□□ -0.45
CHD2-209ENST00000627185 NAIPQ13075 1403 aa12.23□□□□□ -0.45
CHD2-209ENST00000627185 PSEN1P49768 467 aa12.23□□□□□ -0.45
CHD2-209ENST00000627185 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
CHD2-209ENST00000627185 ROCK1Q13464 1354 aa12.21□□□□□ -0.45
CHD2-209ENST00000627185 LRRIQ1Q96JM4 1722 aa12.21□□□□□ -0.45
CHD2-209ENST00000627185 GTPBP6O43824 516 aaPredicted RBP12.21□□□□□ -0.45
CHD2-209ENST00000627185 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
CHD2-209ENST00000627185 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
CHD2-209ENST00000627185 PTPN23Q9H3S7 1636 aa12.21□□□□□ -0.46
CHD2-209ENST00000627185 FAM50AQ14320 339 aaKnown RBP12.2□□□□□ -0.46
CHD2-209ENST00000627185 GRIN2AQ12879 1464 aa12.2□□□□□ -0.46
CHD2-209ENST00000627185 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
CHD2-209ENST00000627185 DISP1Q96F81 1524 aa12.19□□□□□ -0.46
CHD2-209ENST00000627185 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
CHD2-209ENST00000627185 PPP1R15AO75807 674 aaPredicted RBP12.18□□□□□ -0.46
CHD2-209ENST00000627185 KIAA0556O60303 1618 aa12.18□□□□□ -0.46
CHD2-209ENST00000627185 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms