RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 DENND4BO75064 1496 aaPredicted RBP31.6■■■□□ 2.65
PNKP-219ENST00000626274 ADGRL1O94910 1474 aa31.59■■■□□ 2.65
PNKP-219ENST00000626274 RICTORQ6R327 1708 aa31.58■■■□□ 2.65
PNKP-219ENST00000626274 FRMPD1Q5SYB0 1578 aa31.57■■■□□ 2.64
PNKP-219ENST00000626274 MAP3K1Q13233 1512 aa31.57■■■□□ 2.64
PNKP-219ENST00000626274 SCAPERQ9BY12 1400 aa31.55■■■□□ 2.64
PNKP-219ENST00000626274 GPATCH8Q9UKJ3 1502 aaKnown RBP31.54■■■□□ 2.64
PNKP-219ENST00000626274 CCNB3Q8WWL7 1395 aa31.52■■■□□ 2.64
PNKP-219ENST00000626274 SUPT6HQ7KZ85 1726 aaKnown RBP31.51■■■□□ 2.63
PNKP-219ENST00000626274 LRRC9Q6ZRR7 1453 aa31.5■■■□□ 2.63
PNKP-219ENST00000626274 APLP2Q06481 763 aa31.48■■■□□ 2.63
PNKP-219ENST00000626274 POGZQ7Z3K3 1410 aa31.47■■■□□ 2.63
PNKP-219ENST00000626274 NCOA2Q15596 1464 aa31.45■■■□□ 2.62
PNKP-219ENST00000626274 ITSN2Q9NZM3 1697 aa31.44■■■□□ 2.62
PNKP-219ENST00000626274 ZMYM4Q5VZL5 1548 aa31.44■■■□□ 2.62
PNKP-219ENST00000626274 CFDP1Q9UEE9 299 aaPredicted RBP31.44■■■□□ 2.62
PNKP-219ENST00000626274 ABCC1P33527 1531 aa31.43■■■□□ 2.62
PNKP-219ENST00000626274 KANK4Q5T7N3 995 aaPredicted RBP31.42■■■□□ 2.62
PNKP-219ENST00000626274 ZNF777Q9ULD5 760 aaPredicted RBP31.42■■■□□ 2.62
PNKP-219ENST00000626274 SAMD9LQ8IVG5 1584 aa31.4■■■□□ 2.62
PNKP-219ENST00000626274 ZNF518AQ6AHZ1 1483 aa31.4■■■□□ 2.62
PNKP-219ENST00000626274 MAGI2Q86UL8 1455 aa31.38■■■□□ 2.61
PNKP-219ENST00000626274 ARHGEF40Q8TER5 1519 aa31.36■■■□□ 2.61
PNKP-219ENST00000626274 ARHGEF12Q9NZN5 1544 aa31.36■■■□□ 2.61
PNKP-219ENST00000626274 ZFYVE16Q7Z3T8 1539 aa31.34■■■□□ 2.61
PNKP-219ENST00000626274 PLEKHH2Q8IVE3 1493 aa31.34■■■□□ 2.61
PNKP-219ENST00000626274 AFAP1Q8N556 730 aa31.34■■■□□ 2.61
PNKP-219ENST00000626274 KDM5CP41229 1560 aa31.34■■■□□ 2.61
PNKP-219ENST00000626274 TRAPPC8Q9Y2L5 1435 aa31.32■■■□□ 2.61
PNKP-219ENST00000626274 SYCP2Q9BX26 1530 aa31.31■■■□□ 2.6
PNKP-219ENST00000626274 YEATS2Q9ULM3 1422 aa31.31■■■□□ 2.6
PNKP-219ENST00000626274 KIAA1107Q9UPP5 1409 aa31.31■■■□□ 2.6
PNKP-219ENST00000626274 KDM4FA0A1W2PPD8 638 aa31.3■■■□□ 2.6
PNKP-219ENST00000626274 HECW2Q9P2P5 1572 aa31.27■■■□□ 2.6
PNKP-219ENST00000626274 HNRNPMP52272 730 aaKnown RBP eCLIP31.27■■■□□ 2.6
PNKP-219ENST00000626274 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
PNKP-219ENST00000626274 ZNF644Q9H582 1327 aaPredicted RBP31.25■■■□□ 2.59
PNKP-219ENST00000626274 MYT1LQ9UL68 1186 aa31.25■■■□□ 2.59
PNKP-219ENST00000626274 MLH3Q9UHC1 1453 aa31.24■■■□□ 2.59
PNKP-219ENST00000626274 ARID4BQ4LE39 1312 aaPredicted RBP31.2■■■□□ 2.58
PNKP-219ENST00000626274 ATP10AO60312 1499 aa31.2■■■□□ 2.58
PNKP-219ENST00000626274 MYOM3Q5VTT5 1437 aa31.19■■■□□ 2.58
PNKP-219ENST00000626274 CAMSAP2Q08AD1 1489 aa31.19■■■□□ 2.58
PNKP-219ENST00000626274 KIDINS220Q9ULH0 1771 aa31.17■■■□□ 2.58
PNKP-219ENST00000626274 MBD5Q9P267 1494 aa31.16■■■□□ 2.58
PNKP-219ENST00000626274 SPAG9O60271 1321 aaKnown RBP31.16■■■□□ 2.58
PNKP-219ENST00000626274 C9orf84Q5VXU9 1444 aa31.15■■■□□ 2.58
PNKP-219ENST00000626274 MIA2Q96PC5 1412 aa31.15■■■□□ 2.58
PNKP-219ENST00000626274 DIP2CQ9Y2E4 1556 aa31.15■■■□□ 2.58
PNKP-219ENST00000626274 ABCA6Q8N139 1617 aa31.14■■■□□ 2.58
PNKP-219ENST00000626274 BCORL1Q5H9F3 1711 aa31.13■■■□□ 2.57
PNKP-219ENST00000626274 SIGLEC1Q9BZZ2 1709 aa31.13■■■□□ 2.57
PNKP-219ENST00000626274 RSPH4AQ5TD94 716 aa31.1■■■□□ 2.57
PNKP-219ENST00000626274 ATP7AQ04656 1500 aa31.09■■■□□ 2.57
PNKP-219ENST00000626274 ADAMTSL3P82987 1691 aa31.09■■■□□ 2.57
PNKP-219ENST00000626274 REREQ9P2R6 1566 aa31.09■■■□□ 2.57
PNKP-219ENST00000626274 INO80Q9ULG1 1556 aaPredicted RBP31.09■■■□□ 2.57
PNKP-219ENST00000626274 CCDC141Q6ZP82 1450 aa31.08■■■□□ 2.57
PNKP-219ENST00000626274 ARHGEF5Q12774 1597 aa31.07■■■□□ 2.56
PNKP-219ENST00000626274 PTPN23Q9H3S7 1636 aa31.02■■■□□ 2.56
PNKP-219ENST00000626274 RTEL1-TNFRSF6BF6WH68 1400 aa31.01■■■□□ 2.55
PNKP-219ENST00000626274 FGD6Q6ZV73 1430 aa31■■■□□ 2.55
PNKP-219ENST00000626274 MADDQ8WXG6 1647 aa30.99■■■□□ 2.55
PNKP-219ENST00000626274 AGLP35573 1532 aa30.98■■■□□ 2.55
PNKP-219ENST00000626274 MLECQ14165 292 aa30.98■■■□□ 2.55
PNKP-219ENST00000626274 TSPY4P0CV99 314 aa30.97■■■□□ 2.55
PNKP-219ENST00000626274 TSPY10P0CW01 314 aa30.97■■■□□ 2.55
PNKP-219ENST00000626274 ADGBQ8N7X0 1667 aa30.97■■■□□ 2.55
PNKP-219ENST00000626274 TCOF1Q13428 1488 aaKnown RBP30.95■■■□□ 2.54
PNKP-219ENST00000626274 A2MP01023 1474 aa30.94■■■□□ 2.54
PNKP-219ENST00000626274 RIMS1Q86UR5 1692 aaKnown RBP30.92■■■□□ 2.54
PNKP-219ENST00000626274 FER1L4A9Z1Z3 1794 aa30.92■■■□□ 2.54
PNKP-219ENST00000626274 PTPRMP28827 1452 aa30.9■■■□□ 2.54
PNKP-219ENST00000626274 PPARGC1BQ86YN6 1023 aaKnown RBP30.9■■■□□ 2.54
PNKP-219ENST00000626274 PLXNC1O60486 1568 aa30.9■■■□□ 2.54
PNKP-219ENST00000626274 MAST1Q9Y2H9 1570 aa30.9■■■□□ 2.54
PNKP-219ENST00000626274 CROCC2H7BZ55 1655 aa30.85■■■□□ 2.53
PNKP-219ENST00000626274 DNMT1P26358 1616 aaKnown RBP30.85■■■□□ 2.53
PNKP-219ENST00000626274 ABCC5O15440 1437 aa30.84■■■□□ 2.53
PNKP-219ENST00000626274 DHX29Q7Z478 1369 aaKnown RBP30.83■■■□□ 2.53
PNKP-219ENST00000626274 DAPK1P53355 1430 aa30.81■■■□□ 2.52
PNKP-219ENST00000626274 FAM50AQ14320 339 aaKnown RBP30.81■■■□□ 2.52
PNKP-219ENST00000626274 SHANK2Q9UPX8 1470 aa30.81■■■□□ 2.52
PNKP-219ENST00000626274 ESF1Q9H501 851 aaKnown RBP30.75■■■□□ 2.51
PNKP-219ENST00000626274 GGT6Q6P531 493 aa30.72■■■□□ 2.51
PNKP-219ENST00000626274 KIF3BO15066 747 aa30.71■■■□□ 2.51
PNKP-219ENST00000626274 CNTLNQ9NXG0 1405 aa30.71■■■□□ 2.51
PNKP-219ENST00000626274 PLPPR3Q6T4P5 718 aa30.7■■■□□ 2.51
PNKP-219ENST00000626274 DUOX2Q9NRD8 1548 aa30.68■■■□□ 2.5
PNKP-219ENST00000626274 CHIC2Q9UKJ5 165 aa30.67■■■□□ 2.5
PNKP-219ENST00000626274 PPP6R1Q9UPN7 881 aa30.67■■■□□ 2.5
PNKP-219ENST00000626274 ANKRD30AQ9BXX3 1397 aa30.66■■■□□ 2.5
PNKP-219ENST00000626274 KIF15Q9NS87 1388 aa30.66■■■□□ 2.5
PNKP-219ENST00000626274 RRP7BPQ9NSQ0 103 aa30.65■■■□□ 2.5
PNKP-219ENST00000626274 EIF2AK4Q9P2K8 1649 aaKnown RBP30.65■■■□□ 2.5
PNKP-219ENST00000626274 MROH2AA6NES4 1674 aa30.65■■■□□ 2.5
PNKP-219ENST00000626274 C3P01024 1663 aa30.64■■■□□ 2.5
PNKP-219ENST00000626274 CLTCQ00610 1675 aaKnown RBP30.64■■■□□ 2.5
PNKP-219ENST00000626274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.64■■■□□ 2.5
PNKP-219ENST00000626274 CEBPAP49715 358 aaPredicted RBP30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms