RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 RNF25Q96BH1 459 aaPredicted RBP13.89□□□□□ -0.19
TCF4-250ENST00000625849 ZNF687Q8N1G0 1237 aa13.88□□□□□ -0.19
TCF4-250ENST00000625849 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
TCF4-250ENST00000625849 GPR153Q6NV75 609 aa13.87□□□□□ -0.19
TCF4-250ENST00000625849 MYT1LQ9UL68 1186 aa13.84□□□□□ -0.19
TCF4-250ENST00000625849 ARSIQ5FYB1 569 aa13.78□□□□□ -0.2
TCF4-250ENST00000625849 NLRP6P59044 892 aa13.77□□□□□ -0.21
TCF4-250ENST00000625849 PTGER2P43116 358 aa13.76□□□□□ -0.21
TCF4-250ENST00000625849 ZNF316A6NFI3 1004 aaPredicted RBP13.72□□□□□ -0.21
TCF4-250ENST00000625849 FBXO22Q8NEZ5 403 aa13.72□□□□□ -0.21
TCF4-250ENST00000625849 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
TCF4-250ENST00000625849 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.21
TCF4-250ENST00000625849 KHSRPQ92945 711 aaKnown RBP eCLIP13.7□□□□□ -0.223e-7■■■■□ 23.2
TCF4-250ENST00000625849 ANKRD13DQ6ZTN6 518 aa13.69□□□□□ -0.22
TCF4-250ENST00000625849 STK24Q9Y6E0 443 aa13.67□□□□□ -0.22
TCF4-250ENST00000625849 LSM11P83369 360 aaKnown RBP eCLIP13.63□□□□□ -0.23
TCF4-250ENST00000625849 MFRPQ9BY79 579 aa13.63□□□□□ -0.23
TCF4-250ENST00000625849 KIF3CO14782 793 aa13.61□□□□□ -0.23
TCF4-250ENST00000625849 C2orf72A6NCS6 295 aa13.6□□□□□ -0.23
TCF4-250ENST00000625849 STK25O00506 426 aa13.58□□□□□ -0.24
TCF4-250ENST00000625849 NUDT7P0C024 238 aa13.58□□□□□ -0.24
TCF4-250ENST00000625849 PBX2P40425 430 aa13.58□□□□□ -0.24
TCF4-250ENST00000625849 SLC34A2O95436 690 aa13.53□□□□□ -0.24
TCF4-250ENST00000625849 PCDHGA4Q9Y5G9 962 aa13.53□□□□□ -0.24
TCF4-250ENST00000625849 LHX6Q9UPM6 363 aa13.52□□□□□ -0.25
TCF4-250ENST00000625849 ECM2O94769 699 aaPredicted RBP13.5□□□□□ -0.25
TCF4-250ENST00000625849 TMC2Q8TDI7 906 aa13.5□□□□□ -0.25
TCF4-250ENST00000625849 POTEEQ6S8J3 1075 aa13.49□□□□□ -0.25
TCF4-250ENST00000625849 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
TCF4-250ENST00000625849 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
TCF4-250ENST00000625849 HCSTQ9UBK5 93 aa13.4□□□□□ -0.26
TCF4-250ENST00000625849 ARHGAP33O14559 1287 aa13.39□□□□□ -0.27
TCF4-250ENST00000625849 ADGRD1Q6QNK2 874 aa13.39□□□□□ -0.27
TCF4-250ENST00000625849 RGL2O15211 777 aa13.38□□□□□ -0.27
TCF4-250ENST00000625849 PLA2G2EQ9NZK7 142 aa13.38□□□□□ -0.27
TCF4-250ENST00000625849 PPP1R37O75864 691 aa13.35□□□□□ -0.27
TCF4-250ENST00000625849 PKD2Q13563 968 aa13.33□□□□□ -0.28
TCF4-250ENST00000625849 PTCD2Q8WV60 388 aaKnown RBP13.32□□□□□ -0.28
TCF4-250ENST00000625849 KDM4FA0A1W2PPD8 638 aa13.31□□□□□ -0.28
TCF4-250ENST00000625849 TK2O00142 265 aa13.31□□□□□ -0.28
TCF4-250ENST00000625849 DMRTA1Q5VZB9 504 aa13.27□□□□□ -0.29
TCF4-250ENST00000625849 PSEN2P49810 448 aa13.26□□□□□ -0.29
TCF4-250ENST00000625849 FOXK1P85037 733 aa13.26□□□□□ -0.29
TCF4-250ENST00000625849 HRO43593 1189 aa13.25□□□□□ -0.29
TCF4-250ENST00000625849 PPP4R3BQ5MIZ7 849 aa13.25□□□□□ -0.29
TCF4-250ENST00000625849 PLPP6Q8IY26 295 aa13.25□□□□□ -0.29
TCF4-250ENST00000625849 GPHNQ9NQX3 736 aaPredicted RBP13.22□□□□□ -0.29
TCF4-250ENST00000625849 TBC1D12O60347 775 aa13.21□□□□□ -0.29
TCF4-250ENST00000625849 KCTD12Q96CX2 325 aaKnown RBP13.19□□□□□ -0.3
TCF4-250ENST00000625849 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
TCF4-250ENST00000625849 DSG2Q14126 1118 aa13.18□□□□□ -0.3
TCF4-250ENST00000625849 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
TCF4-250ENST00000625849 KCNK17Q96T54 332 aa13.15□□□□□ -0.3
TCF4-250ENST00000625849 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
TCF4-250ENST00000625849 VPS9D1Q9Y2B5 631 aa13.08□□□□□ -0.32
TCF4-250ENST00000625849 OXER1Q8TDS5 423 aa13.07□□□□□ -0.32
TCF4-250ENST00000625849 PTPN5P54829 565 aa13.05□□□□□ -0.32
TCF4-250ENST00000625849 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
TCF4-250ENST00000625849 UPF1Q92900 1129 aaKnown RBP eCLIP13.05□□□□□ -0.32
TCF4-250ENST00000625849 SLC4A5Q9BY07 1137 aa13.02□□□□□ -0.33
TCF4-250ENST00000625849 BCL2L12Q9HB09 334 aa13.02□□□□□ -0.33
TCF4-250ENST00000625849 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
TCF4-250ENST00000625849 PTPREP23469 700 aa12.98□□□□□ -0.33
TCF4-250ENST00000625849 CRISPLD2Q9H0B8 497 aa12.98□□□□□ -0.33
TCF4-250ENST00000625849 PPP1R15BQ5SWA1 713 aa12.97□□□□□ -0.33
TCF4-250ENST00000625849 RYDENQ9NUL5 291 aaKnown RBP12.97□□□□□ -0.33
TCF4-250ENST00000625849 FOSBP53539 338 aa12.96□□□□□ -0.33
TCF4-250ENST00000625849 IFFO2Q5TF58 517 aa12.96□□□□□ -0.33
TCF4-250ENST00000625849 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
TCF4-250ENST00000625849 GOLGA8CPA6NN73 597 aa12.95□□□□□ -0.34
TCF4-250ENST00000625849 BHMG1C9JSJ3 638 aaPredicted RBP12.95□□□□□ -0.34
TCF4-250ENST00000625849 RGS20O76081 388 aa12.95□□□□□ -0.34
TCF4-250ENST00000625849 DNAJC5Q9H3Z4 198 aa12.94□□□□□ -0.34
TCF4-250ENST00000625849 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
TCF4-250ENST00000625849 ZBED2Q9BTP6 218 aa12.93□□□□□ -0.34
TCF4-250ENST00000625849 MRPL50Q8N5N7 158 aaKnown RBP12.92□□□□□ -0.34
TCF4-250ENST00000625849 WNT2BQ93097 391 aa12.92□□□□□ -0.34
TCF4-250ENST00000625849 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
TCF4-250ENST00000625849 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
TCF4-250ENST00000625849 PDE4AP27815 886 aa12.88□□□□□ -0.35
TCF4-250ENST00000625849 ZDHHC16Q969W1 377 aa12.88□□□□□ -0.35
TCF4-250ENST00000625849 NBPF3Q9H094 633 aa12.88□□□□□ -0.35
TCF4-250ENST00000625849 A0A0G2JS52 829 aa12.87□□□□□ -0.35
TCF4-250ENST00000625849 EVI5O60447 810 aa12.87□□□□□ -0.35
TCF4-250ENST00000625849 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
TCF4-250ENST00000625849 ADAM33Q9BZ11 813 aa12.86□□□□□ -0.35
TCF4-250ENST00000625849 IRX2Q9BZI1 471 aaPredicted RBP12.86□□□□□ -0.35
TCF4-250ENST00000625849 MAP3K9P80192 1104 aa12.78□□□□□ -0.36
TCF4-250ENST00000625849 DDX27Q96GQ7 796 aaKnown RBP12.78□□□□□ -0.36
TCF4-250ENST00000625849 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
TCF4-250ENST00000625849 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
TCF4-250ENST00000625849 ANKK1Q8NFD2 765 aa12.75□□□□□ -0.37
TCF4-250ENST00000625849 RABGEF1Q9UJ41 708 aa12.75□□□□□ -0.37
TCF4-250ENST00000625849 MFSD10Q14728 455 aa12.72□□□□□ -0.37
TCF4-250ENST00000625849 PROX2Q3B8N5 592 aa12.72□□□□□ -0.37
TCF4-250ENST00000625849 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
TCF4-250ENST00000625849 ITGBL1O95965 494 aaPredicted RBP12.71□□□□□ -0.37
TCF4-250ENST00000625849 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
TCF4-250ENST00000625849 COL9A1P20849 921 aa12.69□□□□□ -0.38
TCF4-250ENST00000625849 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms