RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	HOXB1	P14653	301 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC02028-223	ENST00000625668	DOK7	Q18PE1	504 aa		13.43	□□□□□ -0.26
LINC02028-223	ENST00000625668	TAOK2	Q9UL54	1235 aa		13.43	□□□□□ -0.26
LINC02028-223	ENST00000625668	MMRN1	Q13201	1228 aa		13.42	□□□□□ -0.26
LINC02028-223	ENST00000625668	ZNF710	Q8N1W2	664 aa		13.41	□□□□□ -0.26
LINC02028-223	ENST00000625668	KRTAP3-3	Q9BYR6	98 aa		13.41	□□□□□ -0.26
LINC02028-223	ENST00000625668	KRTAP3-2	Q9BYR7	98 aa		13.41	□□□□□ -0.26
LINC02028-223	ENST00000625668	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.41	□□□□□ -0.26
LINC02028-223	ENST00000625668	DNAJC5	Q9H3Z4	198 aa		13.4	□□□□□ -0.26
LINC02028-223	ENST00000625668	FBXO22	Q8NEZ5	403 aa		13.39	□□□□□ -0.27
LINC02028-223	ENST00000625668	NLRP6	P59044	892 aa		13.37	□□□□□ -0.27
LINC02028-223	ENST00000625668	ECM2	O94769	699 aa	Predicted RBP	13.36	□□□□□ -0.27
LINC02028-223	ENST00000625668	STK24	Q9Y6E0	443 aa		13.35	□□□□□ -0.27
LINC02028-223	ENST00000625668	RIMBP2	O15034	1052 aa		13.34	□□□□□ -0.27
LINC02028-223	ENST00000625668	PKD2	Q13563	968 aa		13.33	□□□□□ -0.28
LINC02028-223	ENST00000625668	MFRP	Q9BY79	579 aa		13.33	□□□□□ -0.28
LINC02028-223	ENST00000625668	ZSWIM6	Q9HCJ5	1215 aa		13.32	□□□□□ -0.28
LINC02028-223	ENST00000625668	SCRIB	Q14160	1630 aa		13.31	□□□□□ -0.28
LINC02028-223	ENST00000625668	STK25	O00506	426 aa		13.31	□□□□□ -0.28
LINC02028-223	ENST00000625668	UNC13A	Q9UPW8	1703 aa		13.3	□□□□□ -0.28
LINC02028-223	ENST00000625668	ERBB3	P21860	1342 aa		13.29	□□□□□ -0.28
LINC02028-223	ENST00000625668	RGL2	O15211	777 aa		13.28	□□□□□ -0.28
LINC02028-223	ENST00000625668	GPR153	Q6NV75	609 aa		13.28	□□□□□ -0.28
LINC02028-223	ENST00000625668	BICRA	Q9NZM4	1560 aa		13.28	□□□□□ -0.28
LINC02028-223	ENST00000625668	VARS2	Q5ST30	1063 aa	Known RBP	13.22	□□□□□ -0.29
LINC02028-223	ENST00000625668	KIF3C	O14782	793 aa		13.2	□□□□□ -0.3
LINC02028-223	ENST00000625668	ARSI	Q5FYB1	569 aa		13.17	□□□□□ -0.3
LINC02028-223	ENST00000625668	ZNF687	Q8N1G0	1237 aa		13.16	□□□□□ -0.3
LINC02028-223	ENST00000625668	C2orf72	A6NCS6	295 aa		13.15	□□□□□ -0.3
LINC02028-223	ENST00000625668	SHROOM4	Q9ULL8	1493 aa		13.15	□□□□□ -0.3
LINC02028-223	ENST00000625668	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
LINC02028-223	ENST00000625668	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.08	□□□□□ -0.32
LINC02028-223	ENST00000625668	PPP1R37	O75864	691 aa		13.08	□□□□□ -0.32
LINC02028-223	ENST00000625668	SLC34A2	O95436	690 aa		13.06	□□□□□ -0.32
LINC02028-223	ENST00000625668	TMC2	Q8TDI7	906 aa		13.04	□□□□□ -0.32
LINC02028-223	ENST00000625668	HS6ST3	Q8IZP7	471 aa		13.02	□□□□□ -0.33
LINC02028-223	ENST00000625668	NUDT7	P0C024	238 aa		13	□□□□□ -0.33
LINC02028-223	ENST00000625668	RNF166	Q96A37	237 aa	Predicted RBP	13	□□□□□ -0.33
LINC02028-223	ENST00000625668	PCDHGA4	Q9Y5G9	962 aa		13	□□□□□ -0.33
LINC02028-223	ENST00000625668	MYT1L	Q9UL68	1186 aa		12.97	□□□□□ -0.33
LINC02028-223	ENST00000625668	PTGER2	P43116	358 aa		12.95	□□□□□ -0.34
LINC02028-223	ENST00000625668	LHX6	Q9UPM6	363 aa		12.95	□□□□□ -0.34
LINC02028-223	ENST00000625668	LSM11	P83369	360 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
LINC02028-223	ENST00000625668	EIF4G1	Q04637	1599 aa	Known RBP	12.92	□□□□□ -0.34
LINC02028-223	ENST00000625668	ANKRD13D	Q6ZTN6	518 aa		12.92	□□□□□ -0.34
LINC02028-223	ENST00000625668	PBX2	P40425	430 aa		12.91	□□□□□ -0.34
LINC02028-223	ENST00000625668	KDM4F	A0A1W2PPD8	638 aa		12.9	□□□□□ -0.34
LINC02028-223	ENST00000625668	FOXK1	P85037	733 aa		12.9	□□□□□ -0.34
LINC02028-223	ENST00000625668	POTEE	Q6S8J3	1075 aa		12.9	□□□□□ -0.34
LINC02028-223	ENST00000625668	PTCD2	Q8WV60	388 aa	Known RBP	12.9	□□□□□ -0.34
LINC02028-223	ENST00000625668	CHGA	P10645	457 aa	Known RBP	12.89	□□□□□ -0.35
LINC02028-223	ENST00000625668	GPHN	Q9NQX3	736 aa	Predicted RBP	12.89	□□□□□ -0.35
LINC02028-223	ENST00000625668	NKX1-1	Q15270	411 aa	Predicted RBP	12.86	□□□□□ -0.35
LINC02028-223	ENST00000625668	PLPP6	Q8IY26	295 aa		12.86	□□□□□ -0.35
LINC02028-223	ENST00000625668	AXIN2	Q9Y2T1	843 aa		12.84	□□□□□ -0.35
LINC02028-223	ENST00000625668	CC2D2A	Q9P2K1	1620 aa		12.84	□□□□□ -0.35
LINC02028-223	ENST00000625668	PSD	A5PKW4	1024 aa	Predicted RBP	12.83	□□□□□ -0.36
LINC02028-223	ENST00000625668	DSG2	Q14126	1118 aa		12.83	□□□□□ -0.36
LINC02028-223	ENST00000625668	CECR2	Q9BXF3	1484 aa		12.79	□□□□□ -0.36
LINC02028-223	ENST00000625668	ARHGAP33	O14559	1287 aa		12.78	□□□□□ -0.36
LINC02028-223	ENST00000625668	RYDEN	Q9NUL5	291 aa	Known RBP	12.77	□□□□□ -0.37
LINC02028-223	ENST00000625668	TBC1D12	O60347	775 aa		12.74	□□□□□ -0.37
LINC02028-223	ENST00000625668	CRISPLD2	Q9H0B8	497 aa		12.74	□□□□□ -0.37
LINC02028-223	ENST00000625668	ADGRD1	Q6QNK2	874 aa		12.73	□□□□□ -0.37
LINC02028-223	ENST00000625668	SMARCA4	P51532	1647 aa		12.72	□□□□□ -0.37
LINC02028-223	ENST00000625668	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.72	□□□□□ -0.37
LINC02028-223	ENST00000625668	OXER1	Q8TDS5	423 aa		12.71	□□□□□ -0.37
LINC02028-223	ENST00000625668	TK2	O00142	265 aa		12.69	□□□□□ -0.38
LINC02028-223	ENST00000625668	PPP4R3B	Q5MIZ7	849 aa		12.69	□□□□□ -0.38
LINC02028-223	ENST00000625668	PSEN2	P49810	448 aa		12.68	□□□□□ -0.38
LINC02028-223	ENST00000625668	DMRTA1	Q5VZB9	504 aa		12.68	□□□□□ -0.38
LINC02028-223	ENST00000625668	MROH2B	Q7Z745	1585 aa		12.66	□□□□□ -0.38
LINC02028-223	ENST00000625668	HR	O43593	1189 aa		12.66	□□□□□ -0.38
LINC02028-223	ENST00000625668	NCKAP5L	Q9HCH0	1330 aa		12.65	□□□□□ -0.38
LINC02028-223	ENST00000625668	GTPBP6	O43824	516 aa	Predicted RBP	12.65	□□□□□ -0.38
LINC02028-223	ENST00000625668	PPP1R15B	Q5SWA1	713 aa		12.65	□□□□□ -0.38
LINC02028-223	ENST00000625668	ATAD2B	Q9ULI0	1458 aa		12.65	□□□□□ -0.38
LINC02028-223	ENST00000625668	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.63	□□□□□ -0.39
LINC02028-223	ENST00000625668	SMARCA2	P51531	1590 aa		12.62	□□□□□ -0.39
LINC02028-223	ENST00000625668	PDE4A	P27815	886 aa		12.62	□□□□□ -0.39
LINC02028-223	ENST00000625668	NCAPD3	P42695	1498 aa		12.61	□□□□□ -0.39
LINC02028-223	ENST00000625668	HCST	Q9UBK5	93 aa		12.61	□□□□□ -0.39
LINC02028-223	ENST00000625668	PEG3	Q9GZU2	1588 aa		12.6	□□□□□ -0.39
LINC02028-223	ENST00000625668	KCNK17	Q96T54	332 aa		12.58	□□□□□ -0.4
LINC02028-223	ENST00000625668	HMGXB3	Q12766	1538 aa		12.57	□□□□□ -0.4
LINC02028-223	ENST00000625668	ZNF454	Q8N9F8	522 aa		12.56	□□□□□ -0.4
LINC02028-223	ENST00000625668	BCL2L12	Q9HB09	334 aa		12.56	□□□□□ -0.4
LINC02028-223	ENST00000625668	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.56	□□□□□ -0.4
LINC02028-223	ENST00000625668	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.55	□□□□□ -0.4
LINC02028-223	ENST00000625668	FOSB	P53539	338 aa		12.55	□□□□□ -0.4
LINC02028-223	ENST00000625668	KCNH8	Q96L42	1107 aa		12.55	□□□□□ -0.4
LINC02028-223	ENST00000625668	RSF1	Q96T23	1441 aa	Predicted RBP	12.54	□□□□□ -0.4
LINC02028-223	ENST00000625668	MFSD10	Q14728	455 aa		12.53	□□□□□ -0.4
LINC02028-223	ENST00000625668	LARP6	Q9BRS8	491 aa	Known RBP	12.53	□□□□□ -0.4
LINC02028-223	ENST00000625668	VPS9D1	Q9Y2B5	631 aa		12.53	□□□□□ -0.4
LINC02028-223	ENST00000625668	DDX27	Q96GQ7	796 aa	Known RBP	12.52	□□□□□ -0.41
LINC02028-223	ENST00000625668	SLC4A5	Q9BY07	1137 aa		12.51	□□□□□ -0.41
LINC02028-223	ENST00000625668	PLA2G2E	Q9NZK7	142 aa		12.51	□□□□□ -0.41
LINC02028-223	ENST00000625668	EVI5	O60447	810 aa		12.5	□□□□□ -0.41
LINC02028-223	ENST00000625668	WIZ	O95785	1651 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms