RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
CHD2-203ENST00000625243 PTGER2P43116 358 aa9.58□□□□□ -0.88
CHD2-203ENST00000625243 PHF8Q9UPP1 1060 aa9.58□□□□□ -0.88
CHD2-203ENST00000625243 RIOK3O14730 519 aaKnown RBP9.57□□□□□ -0.88
CHD2-203ENST00000625243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.56□□□□□ -0.88
CHD2-203ENST00000625243 ZFP91Q96JP5 570 aaPredicted RBP9.56□□□□□ -0.88
CHD2-203ENST00000625243 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
CHD2-203ENST00000625243 KHSRPQ92945 711 aaKnown RBP eCLIP9.54□□□□□ -0.883e-17■■■□□ 17
CHD2-203ENST00000625243 VGFO15240 615 aaPredicted RBP9.53□□□□□ -0.88
CHD2-203ENST00000625243 RNF25Q96BH1 459 aaPredicted RBP9.53□□□□□ -0.88
CHD2-203ENST00000625243 LSM11P83369 360 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD2-203ENST00000625243 NLRP6P59044 892 aa9.48□□□□□ -0.89
CHD2-203ENST00000625243 FBXO22Q8NEZ5 403 aa9.44□□□□□ -0.9
CHD2-203ENST00000625243 NUDT7P0C024 238 aa9.43□□□□□ -0.9
CHD2-203ENST00000625243 PBX2P40425 430 aa9.43□□□□□ -0.9
CHD2-203ENST00000625243 BCL11BQ9C0K0 894 aaPredicted RBP9.43□□□□□ -0.9
CHD2-203ENST00000625243 C2orf72A6NCS6 295 aa9.41□□□□□ -0.9
CHD2-203ENST00000625243 AXIN2Q9Y2T1 843 aa9.41□□□□□ -0.9
CHD2-203ENST00000625243 KIF3CO14782 793 aa9.4□□□□□ -0.9
CHD2-203ENST00000625243 LHX6Q9UPM6 363 aa9.4□□□□□ -0.9
CHD2-203ENST00000625243 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
CHD2-203ENST00000625243 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
CHD2-203ENST00000625243 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
CHD2-203ENST00000625243 POTEEQ6S8J3 1075 aa9.38□□□□□ -0.91
CHD2-203ENST00000625243 MFRPQ9BY79 579 aa9.38□□□□□ -0.91
CHD2-203ENST00000625243 PCDHGA4Q9Y5G9 962 aa9.37□□□□□ -0.91
CHD2-203ENST00000625243 HCSTQ9UBK5 93 aa9.36□□□□□ -0.91
CHD2-203ENST00000625243 SLC34A2O95436 690 aa9.34□□□□□ -0.91
CHD2-203ENST00000625243 STK25O00506 426 aa9.32□□□□□ -0.92
CHD2-203ENST00000625243 TMC2Q8TDI7 906 aa9.32□□□□□ -0.92
CHD2-203ENST00000625243 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
CHD2-203ENST00000625243 ADGRD1Q6QNK2 874 aa9.31□□□□□ -0.92
CHD2-203ENST00000625243 PSDA5PKW4 1024 aaPredicted RBP9.28□□□□□ -0.92
CHD2-203ENST00000625243 TK2O00142 265 aa9.23□□□□□ -0.93
CHD2-203ENST00000625243 PSEN2P49810 448 aa9.23□□□□□ -0.93
CHD2-203ENST00000625243 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
CHD2-203ENST00000625243 ECM2O94769 699 aaPredicted RBP9.22□□□□□ -0.93
CHD2-203ENST00000625243 HRO43593 1189 aa9.21□□□□□ -0.94
CHD2-203ENST00000625243 KCTD12Q96CX2 325 aaKnown RBP9.21□□□□□ -0.94
CHD2-203ENST00000625243 KDM4FA0A1W2PPD8 638 aa9.2□□□□□ -0.94
CHD2-203ENST00000625243 PPP1R37O75864 691 aa9.2□□□□□ -0.94
CHD2-203ENST00000625243 PTCD2Q8WV60 388 aaKnown RBP9.2□□□□□ -0.94
CHD2-203ENST00000625243 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
CHD2-203ENST00000625243 PPP4R3BQ5MIZ7 849 aa9.17□□□□□ -0.94
CHD2-203ENST00000625243 RGL2O15211 777 aa9.15□□□□□ -0.94
CHD2-203ENST00000625243 PLPP6Q8IY26 295 aa9.15□□□□□ -0.94
CHD2-203ENST00000625243 TBC1D12O60347 775 aa9.14□□□□□ -0.95
CHD2-203ENST00000625243 FOXK1P85037 733 aa9.13□□□□□ -0.95
CHD2-203ENST00000625243 KCNK17Q96T54 332 aa9.13□□□□□ -0.95
CHD2-203ENST00000625243 KCNH8Q96L42 1107 aa9.12□□□□□ -0.95
CHD2-203ENST00000625243 PTPN5P54829 565 aa9.11□□□□□ -0.95
CHD2-203ENST00000625243 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
CHD2-203ENST00000625243 DSG2Q14126 1118 aa9.09□□□□□ -0.95
CHD2-203ENST00000625243 VPS9D1Q9Y2B5 631 aa9.09□□□□□ -0.95
CHD2-203ENST00000625243 PKD2Q13563 968 aa9.08□□□□□ -0.96
CHD2-203ENST00000625243 RGS20O76081 388 aa9.05□□□□□ -0.96
CHD2-203ENST00000625243 ZNF454Q8N9F8 522 aa9.03□□□□□ -0.96
CHD2-203ENST00000625243 IRX2Q9BZI1 471 aaPredicted RBP9.03□□□□□ -0.96
CHD2-203ENST00000625243 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
CHD2-203ENST00000625243 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
CHD2-203ENST00000625243 THSD4Q6ZMP0 1018 aa9.01□□□□□ -0.97
CHD2-203ENST00000625243 OXER1Q8TDS5 423 aa9.01□□□□□ -0.97
CHD2-203ENST00000625243 UPF1Q92900 1129 aaKnown RBP eCLIP9.01□□□□□ -0.97
CHD2-203ENST00000625243 SLC4A5Q9BY07 1137 aa9.01□□□□□ -0.97
CHD2-203ENST00000625243 BCL2L12Q9HB09 334 aa9.01□□□□□ -0.97
CHD2-203ENST00000625243 A0A0G2JS52 829 aa8.98□□□□□ -0.97
CHD2-203ENST00000625243 BHMG1C9JSJ3 638 aaPredicted RBP8.98□□□□□ -0.97
CHD2-203ENST00000625243 PTPREP23469 700 aa8.98□□□□□ -0.97
CHD2-203ENST00000625243 MRPL50Q8N5N7 158 aaKnown RBP8.98□□□□□ -0.97
CHD2-203ENST00000625243 WNT2BQ93097 391 aa8.98□□□□□ -0.97
CHD2-203ENST00000625243 FOSBP53539 338 aa8.96□□□□□ -0.98
CHD2-203ENST00000625243 ZBED2Q9BTP6 218 aa8.96□□□□□ -0.98
CHD2-203ENST00000625243 HS6ST3Q8IZP7 471 aa8.95□□□□□ -0.98
CHD2-203ENST00000625243 PPP1R15BQ5SWA1 713 aa8.91□□□□□ -0.98
CHD2-203ENST00000625243 NBPF3Q9H094 633 aa8.91□□□□□ -0.98
CHD2-203ENST00000625243 ZDHHC16Q969W1 377 aa8.9□□□□□ -0.98
CHD2-203ENST00000625243 JPH4Q96JJ6 628 aa8.9□□□□□ -0.98
CHD2-203ENST00000625243 CRISPLD2Q9H0B8 497 aa8.9□□□□□ -0.98
CHD2-203ENST00000625243 ANO8Q9HCE9 1232 aaPredicted RBP8.9□□□□□ -0.98
CHD2-203ENST00000625243 ADAM33Q9BZ11 813 aa8.89□□□□□ -0.99
CHD2-203ENST00000625243 EVI5O60447 810 aa8.88□□□□□ -0.99
CHD2-203ENST00000625243 CHGAP10645 457 aaKnown RBP8.88□□□□□ -0.99
CHD2-203ENST00000625243 ANKK1Q8NFD2 765 aa8.85□□□□□ -0.99
CHD2-203ENST00000625243 PDE4AP27815 886 aa8.84□□□□□ -0.99
CHD2-203ENST00000625243 NKX1-1Q15270 411 aaPredicted RBP8.84□□□□□ -0.99
CHD2-203ENST00000625243 RYDENQ9NUL5 291 aaKnown RBP8.84□□□□□ -0.99
CHD2-203ENST00000625243 NCKAP5LQ9HCH0 1330 aa8.83□□□□□ -1
CHD2-203ENST00000625243 Q6ZNB5 142 aa8.83□□□□□ -1
CHD2-203ENST00000625243 ITGBL1O95965 494 aaPredicted RBP8.82□□□□□ -1
CHD2-203ENST00000625243 RABGEF1Q9UJ41 708 aa8.82□□□□□ -1
CHD2-203ENST00000625243 PPP1R3GB7ZBB8 358 aa8.81□□□□□ -1
CHD2-203ENST00000625243 MAP3K9P80192 1104 aa8.81□□□□□ -1
CHD2-203ENST00000625243 PROX2Q3B8N5 592 aa8.81□□□□□ -1
CHD2-203ENST00000625243 BCAMP50895 628 aa8.8□□□□□ -1
CHD2-203ENST00000625243 DNAJC5Q9H3Z4 198 aa8.79□□□□□ -1
CHD2-203ENST00000625243 COL9A1P20849 921 aa8.78□□□□□ -1
CHD2-203ENST00000625243 LARP6Q9BRS8 491 aaKnown RBP8.78□□□□□ -1
CHD2-203ENST00000625243 PCDHGA10Q9Y5H3 936 aa8.78□□□□□ -1
CHD2-203ENST00000625243 SOWAHBA6NEL2 793 aa8.77□□□□□ -1.01
CHD2-203ENST00000625243 DDX27Q96GQ7 796 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms