RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 POTEBQ6S5H4 581 aa8.37□□□□□ -1.07
CDKL5-208ENST00000624953 MICALL2Q8IY33 904 aa8.37□□□□□ -1.07
CDKL5-208ENST00000624953 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-208ENST00000624953 BOLA1Q9Y3E2 137 aa8.37□□□□□ -1.07
CDKL5-208ENST00000624953 SNPHO15079 494 aa8.36□□□□□ -1.07
CDKL5-208ENST00000624953 SPNS2Q8IVW8 549 aa8.34□□□□□ -1.07
CDKL5-208ENST00000624953 KIF3CO14782 793 aa8.33□□□□□ -1.08
CDKL5-208ENST00000624953 TMEM92Q6UXU6 159 aa8.33□□□□□ -1.08
CDKL5-208ENST00000624953 SPRYD3Q8NCJ5 442 aa8.33□□□□□ -1.08
CDKL5-208ENST00000624953 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-208ENST00000624953 EMP3P54852 163 aa8.32□□□□□ -1.08
CDKL5-208ENST00000624953 PLCB2Q00722 1185 aa8.32□□□□□ -1.08
CDKL5-208ENST00000624953 MMRN1Q13201 1228 aa8.32□□□□□ -1.08
CDKL5-208ENST00000624953 FAM205CA6NFA0 338 aa8.31□□□□□ -1.08
CDKL5-208ENST00000624953 HS3ST6Q96QI5 342 aa8.3□□□□□ -1.08
CDKL5-208ENST00000624953 HOXB3P14651 431 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-208ENST00000624953 PAXIP1Q6ZW49 1069 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-208ENST00000624953 CADPS2Q86UW7 1296 aa8.28□□□□□ -1.08
CDKL5-208ENST00000624953 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
CDKL5-208ENST00000624953 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
CDKL5-208ENST00000624953 CRISPLD2Q9H0B8 497 aa8.28□□□□□ -1.08
CDKL5-208ENST00000624953 NCKAP5LQ9HCH0 1330 aa8.26□□□□□ -1.09
CDKL5-208ENST00000624953 MFSD10Q14728 455 aa8.24□□□□□ -1.09
CDKL5-208ENST00000624953 G3V3G9 751 aa8.23□□□□□ -1.09
CDKL5-208ENST00000624953 GPHNQ9NQX3 736 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-208ENST00000624953 CFAP44Q96MT7 982 aa8.22□□□□□ -1.09
CDKL5-208ENST00000624953 C2orf72A6NCS6 295 aa8.2□□□□□ -1.1
CDKL5-208ENST00000624953 TSHZ2Q9NRE2 1034 aa8.2□□□□□ -1.1
CDKL5-208ENST00000624953 FOXK1P85037 733 aa8.19□□□□□ -1.1
CDKL5-208ENST00000624953 HOXB1P14653 301 aaPredicted RBP8.17□□□□□ -1.1
CDKL5-208ENST00000624953 ZNF710Q8N1W2 664 aa8.17□□□□□ -1.1
CDKL5-208ENST00000624953 SLC34A2O95436 690 aa8.15□□□□□ -1.1
CDKL5-208ENST00000624953 CAMK2BQ13554 666 aa8.15□□□□□ -1.1
CDKL5-208ENST00000624953 ERBB3P21860 1342 aa8.14□□□□□ -1.11
CDKL5-208ENST00000624953 PDE4AP27815 886 aa8.14□□□□□ -1.11
CDKL5-208ENST00000624953 DSG2Q14126 1118 aa8.14□□□□□ -1.11
CDKL5-208ENST00000624953 DOK7Q18PE1 504 aa8.14□□□□□ -1.11
CDKL5-208ENST00000624953 VARS2Q5ST30 1063 aaKnown RBP8.12□□□□□ -1.11
CDKL5-208ENST00000624953 TMC2Q8TDI7 906 aa8.12□□□□□ -1.11
CDKL5-208ENST00000624953 KDM4FA0A1W2PPD8 638 aa8.11□□□□□ -1.11
CDKL5-208ENST00000624953 PPP1R15BQ5SWA1 713 aa8.1□□□□□ -1.11
CDKL5-208ENST00000624953 KHSRPQ92945 711 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDKL5-208ENST00000624953 KDM2AQ9Y2K7 1162 aa8.1□□□□□ -1.11
CDKL5-208ENST00000624953 ARIH1Q9Y4X5 557 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-208ENST00000624953 GPR153Q6NV75 609 aa8.09□□□□□ -1.11
CDKL5-208ENST00000624953 PLPP6Q8IY26 295 aa8.09□□□□□ -1.11
CDKL5-208ENST00000624953 PTCD2Q8WV60 388 aaKnown RBP8.09□□□□□ -1.11
CDKL5-208ENST00000624953 DDX27Q96GQ7 796 aaKnown RBP8.08□□□□□ -1.12
CDKL5-208ENST00000624953 LARP6Q9BRS8 491 aaKnown RBP8.08□□□□□ -1.12
CDKL5-208ENST00000624953 ZSWIM6Q9HCJ5 1215 aa8.08□□□□□ -1.12
CDKL5-208ENST00000624953 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
CDKL5-208ENST00000624953 OXER1Q8TDS5 423 aa8.07□□□□□ -1.12
CDKL5-208ENST00000624953 VSIG10Q8N0Z9 540 aa8.06□□□□□ -1.12
CDKL5-208ENST00000624953 EMILIN3Q9NT22 766 aa8.06□□□□□ -1.12
CDKL5-208ENST00000624953 RIMBP2O15034 1052 aa8.05□□□□□ -1.12
CDKL5-208ENST00000624953 HAP1P54257 671 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-208ENST00000624953 ZNF687Q8N1G0 1237 aa8.02□□□□□ -1.13
CDKL5-208ENST00000624953 PCDHGA4Q9Y5G9 962 aa8.01□□□□□ -1.13
CDKL5-208ENST00000624953 E2F4Q16254 413 aa8□□□□□ -1.13
CDKL5-208ENST00000624953 RNF166Q96A37 237 aaPredicted RBP8□□□□□ -1.13
CDKL5-208ENST00000624953 ANO8Q9HCE9 1232 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-208ENST00000624953 KCNV2Q8TDN2 545 aa7.98□□□□□ -1.13
CDKL5-208ENST00000624953 MYT1LQ9UL68 1186 aa7.97□□□□□ -1.13
CDKL5-208ENST00000624953 ZNF316A6NFI3 1004 aaPredicted RBP7.96□□□□□ -1.14
CDKL5-208ENST00000624953 NUDT7P0C024 238 aa7.95□□□□□ -1.14
CDKL5-208ENST00000624953 PDIA6Q15084 440 aa7.95□□□□□ -1.14
CDKL5-208ENST00000624953 ANKRD13DQ6ZTN6 518 aa7.95□□□□□ -1.14
CDKL5-208ENST00000624953 SLC24A1O60721 1099 aa7.94□□□□□ -1.14
CDKL5-208ENST00000624953 POTEEQ6S8J3 1075 aa7.94□□□□□ -1.14
CDKL5-208ENST00000624953 ARHGEF1Q92888 912 aaKnown RBP7.94□□□□□ -1.14
CDKL5-208ENST00000624953 PTGER2P43116 358 aa7.92□□□□□ -1.14
CDKL5-208ENST00000624953 WDR70Q9NW82 654 aa7.92□□□□□ -1.14
CDKL5-208ENST00000624953 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
CDKL5-208ENST00000624953 DPYSL4O14531 572 aa7.91□□□□□ -1.14
CDKL5-208ENST00000624953 P3H3Q8IVL6 736 aa7.91□□□□□ -1.14
CDKL5-208ENST00000624953 LHX6Q9UPM6 363 aa7.91□□□□□ -1.14
CDKL5-208ENST00000624953 TBC1D12O60347 775 aa7.9□□□□□ -1.14
CDKL5-208ENST00000624953 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-208ENST00000624953 UPF1Q92900 1129 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDKL5-208ENST00000624953 EVI5O60447 810 aa7.88□□□□□ -1.15
CDKL5-208ENST00000624953 LSM11P83369 360 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDKL5-208ENST00000624953 FOSBP53539 338 aa7.86□□□□□ -1.15
CDKL5-208ENST00000624953 MAP3K9P80192 1104 aa7.85□□□□□ -1.15
CDKL5-208ENST00000624953 JPH4Q96JJ6 628 aa7.85□□□□□ -1.15
CDKL5-208ENST00000624953 PSDA5PKW4 1024 aaPredicted RBP7.84□□□□□ -1.15
CDKL5-208ENST00000624953 TESPA1A2RU30 521 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-208ENST00000624953 PHF14O94880 888 aa7.82□□□□□ -1.16
CDKL5-208ENST00000624953 PCDHGA10Q9Y5H3 936 aa7.82□□□□□ -1.16
CDKL5-208ENST00000624953 PRIM1P49642 420 aaKnown RBP7.81□□□□□ -1.16
CDKL5-208ENST00000624953 OSBPP22059 807 aa7.79□□□□□ -1.16
CDKL5-208ENST00000624953 PSEN2P49810 448 aa7.79□□□□□ -1.16
CDKL5-208ENST00000624953 DMRTA1Q5VZB9 504 aa7.79□□□□□ -1.16
CDKL5-208ENST00000624953 MLLT3P42568 568 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-208ENST00000624953 EPAS1Q99814 870 aa7.78□□□□□ -1.16
CDKL5-208ENST00000624953 BCL2L12Q9HB09 334 aa7.78□□□□□ -1.16
CDKL5-208ENST00000624953 SEMA3EO15041 775 aa7.77□□□□□ -1.17
CDKL5-208ENST00000624953 PBX2P40425 430 aa7.77□□□□□ -1.17
CDKL5-208ENST00000624953 NISCHQ9Y2I1 1504 aa7.77□□□□□ -1.17
CDKL5-208ENST00000624953 TYW1BQ6NUM6 668 aa7.76□□□□□ -1.17
CDKL5-208ENST00000624953 ADGRD1Q6QNK2 874 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms