RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 ATP10BO94823 1461 aa12.84□□□□□ -0.35
PCDHB9-203ENST00000624909 FYCO1Q9BQS8 1478 aa12.84□□□□□ -0.35
PCDHB9-203ENST00000624909 ASXL2Q76L83 1435 aa12.83□□□□□ -0.36
PCDHB9-203ENST00000624909 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
PCDHB9-203ENST00000624909 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
PCDHB9-203ENST00000624909 HECW1Q76N89 1606 aa12.83□□□□□ -0.36
PCDHB9-203ENST00000624909 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.36
PCDHB9-203ENST00000624909 ZCCHC11Q5TAX3 1644 aaKnown RBP12.82□□□□□ -0.36
PCDHB9-203ENST00000624909 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
PCDHB9-203ENST00000624909 CCDC18Q5T9S5 1454 aa12.82□□□□□ -0.36
PCDHB9-203ENST00000624909 WDR7Q9Y4E6 1490 aa12.81□□□□□ -0.36
PCDHB9-203ENST00000624909 EPRSP07814 1512 aaKnown RBP12.79□□□□□ -0.36
PCDHB9-203ENST00000624909 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
PCDHB9-203ENST00000624909 GLI2P10070 1586 aa12.78□□□□□ -0.36
PCDHB9-203ENST00000624909 FAM69CQ0P6D2 419 aa12.78□□□□□ -0.36
PCDHB9-203ENST00000624909 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
PCDHB9-203ENST00000624909 DIP2BQ9P265 1576 aa12.75□□□□□ -0.37
PCDHB9-203ENST00000624909 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
PCDHB9-203ENST00000624909 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
PCDHB9-203ENST00000624909 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
PCDHB9-203ENST00000624909 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
PCDHB9-203ENST00000624909 TROQ12816 1431 aaPredicted RBP12.71□□□□□ -0.37
PCDHB9-203ENST00000624909 ARID3CA6NKF2 412 aa12.71□□□□□ -0.37
PCDHB9-203ENST00000624909 KCNH8Q96L42 1107 aa12.71□□□□□ -0.37
PCDHB9-203ENST00000624909 PHLDB1Q86UU1 1377 aa12.7□□□□□ -0.38
PCDHB9-203ENST00000624909 CDK13Q14004 1512 aaKnown RBP12.7□□□□□ -0.38
PCDHB9-203ENST00000624909 TEX14Q8IWB6 1497 aa12.69□□□□□ -0.38
PCDHB9-203ENST00000624909 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
PCDHB9-203ENST00000624909 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
PCDHB9-203ENST00000624909 MAGI3Q5TCQ9 1506 aa12.68□□□□□ -0.38
PCDHB9-203ENST00000624909 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
PCDHB9-203ENST00000624909 CFAP43Q8NDM7 1665 aa12.67□□□□□ -0.38
PCDHB9-203ENST00000624909 ABCA9Q8IUA7 1624 aa12.67□□□□□ -0.38
PCDHB9-203ENST00000624909 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
PCDHB9-203ENST00000624909 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
PCDHB9-203ENST00000624909 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
PCDHB9-203ENST00000624909 KIF14Q15058 1648 aa12.65□□□□□ -0.38
PCDHB9-203ENST00000624909 ARAP3Q8WWN8 1544 aa12.64□□□□□ -0.39
PCDHB9-203ENST00000624909 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
PCDHB9-203ENST00000624909 EHBP1L1Q8N3D4 1523 aa12.63□□□□□ -0.39
PCDHB9-203ENST00000624909 LRRIQ1Q96JM4 1722 aa12.63□□□□□ -0.39
PCDHB9-203ENST00000624909 PLCH2O75038 1416 aa12.62□□□□□ -0.39
PCDHB9-203ENST00000624909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCDHB9-203ENST00000624909 NEO1Q92859 1461 aa12.62□□□□□ -0.39
PCDHB9-203ENST00000624909 LRRC9Q6ZRR7 1453 aa12.61□□□□□ -0.39
PCDHB9-203ENST00000624909 EFCAB2Q5VUJ9 269 aa12.6□□□□□ -0.39
PCDHB9-203ENST00000624909 CFAP74Q9C0B2 1584 aa12.59□□□□□ -0.39
PCDHB9-203ENST00000624909 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
PCDHB9-203ENST00000624909 FANCAO15360 1455 aa12.57□□□□□ -0.4
PCDHB9-203ENST00000624909 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
PCDHB9-203ENST00000624909 TTC37Q6PGP7 1564 aa12.56□□□□□ -0.4
PCDHB9-203ENST00000624909 PPRC1Q5VV67 1664 aaKnown RBP12.55□□□□□ -0.4
PCDHB9-203ENST00000624909 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
PCDHB9-203ENST00000624909 MYO5CQ9NQX4 1742 aa12.54□□□□□ -0.4
PCDHB9-203ENST00000624909 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
PCDHB9-203ENST00000624909 IFNLR1Q8IU57 520 aaPredicted RBP12.54□□□□□ -0.4
PCDHB9-203ENST00000624909 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
PCDHB9-203ENST00000624909 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
PCDHB9-203ENST00000624909 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
PCDHB9-203ENST00000624909 TSPOAP1O95153 1857 aa12.53□□□□□ -0.4
PCDHB9-203ENST00000624909 KANK4Q5T7N3 995 aaPredicted RBP12.53□□□□□ -0.4
PCDHB9-203ENST00000624909 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
PCDHB9-203ENST00000624909 RSPH4AQ5TD94 716 aa12.52□□□□□ -0.41
PCDHB9-203ENST00000624909 MIA2Q96PC5 1412 aa12.52□□□□□ -0.41
PCDHB9-203ENST00000624909 KIAA1107Q9UPP5 1409 aa12.52□□□□□ -0.41
PCDHB9-203ENST00000624909 ARHGAP5Q13017 1502 aa12.52□□□□□ -0.41
PCDHB9-203ENST00000624909 KDM6BO15054 1643 aa12.51□□□□□ -0.41
PCDHB9-203ENST00000624909 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
PCDHB9-203ENST00000624909 DENND4BO75064 1496 aaPredicted RBP12.5□□□□□ -0.41
PCDHB9-203ENST00000624909 ITSN2Q9NZM3 1697 aa12.5□□□□□ -0.41
PCDHB9-203ENST00000624909 ADGRL1O94910 1474 aa12.49□□□□□ -0.41
PCDHB9-203ENST00000624909 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
PCDHB9-203ENST00000624909 MYOM3Q5VTT5 1437 aa12.48□□□□□ -0.41
PCDHB9-203ENST00000624909 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
PCDHB9-203ENST00000624909 ZNF518AQ6AHZ1 1483 aa12.47□□□□□ -0.41
PCDHB9-203ENST00000624909 MAGI2Q86UL8 1455 aa12.47□□□□□ -0.41
PCDHB9-203ENST00000624909 SCAPERQ9BY12 1400 aa12.47□□□□□ -0.41
PCDHB9-203ENST00000624909 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
PCDHB9-203ENST00000624909 CDC42BPBQ9Y5S2 1711 aa12.47□□□□□ -0.41
PCDHB9-203ENST00000624909 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.42
PCDHB9-203ENST00000624909 MIER1Q8N108 512 aa12.45□□□□□ -0.42
PCDHB9-203ENST00000624909 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
PCDHB9-203ENST00000624909 POGZQ7Z3K3 1410 aa12.45□□□□□ -0.42
PCDHB9-203ENST00000624909 ABCC1P33527 1531 aa12.44□□□□□ -0.42
PCDHB9-203ENST00000624909 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
PCDHB9-203ENST00000624909 RAPGEF3O95398 923 aa12.43□□□□□ -0.42
PCDHB9-203ENST00000624909 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
PCDHB9-203ENST00000624909 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
PCDHB9-203ENST00000624909 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
PCDHB9-203ENST00000624909 MLH3Q9UHC1 1453 aa12.41□□□□□ -0.42
PCDHB9-203ENST00000624909 FGD6Q6ZV73 1430 aa12.41□□□□□ -0.42
PCDHB9-203ENST00000624909 SAMD9LQ8IVG5 1584 aa12.41□□□□□ -0.42
PCDHB9-203ENST00000624909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.41□□□□□ -0.42
PCDHB9-203ENST00000624909 KDM5CP41229 1560 aa12.4□□□□□ -0.42
PCDHB9-203ENST00000624909 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
PCDHB9-203ENST00000624909 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
PCDHB9-203ENST00000624909 CAMSAP2Q08AD1 1489 aa12.4□□□□□ -0.43
PCDHB9-203ENST00000624909 MBD5Q9P267 1494 aa12.4□□□□□ -0.43
PCDHB9-203ENST00000624909 RICTORQ6R327 1708 aa12.4□□□□□ -0.43
PCDHB9-203ENST00000624909 RTEL1-TNFRSF6BF6WH68 1400 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms