RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 GRIN2AQ12879 1464 aa7.38□□□□□ -1.23
ERCC6-213ENST00000624341 SENP3Q9H4L4 574 aaPredicted RBP7.37□□□□□ -1.23
ERCC6-213ENST00000624341 NCLP19338 710 aaKnown RBP7.37□□□□□ -1.23
ERCC6-213ENST00000624341 CARD11Q9BXL7 1154 aa7.36□□□□□ -1.23
ERCC6-213ENST00000624341 NAP1L5Q96NT1 182 aaPredicted RBP7.36□□□□□ -1.23
ERCC6-213ENST00000624341 NEUROD2Q15784 382 aa7.36□□□□□ -1.23
ERCC6-213ENST00000624341 MYH16Q9H6N6 1097 aa7.36□□□□□ -1.23
ERCC6-213ENST00000624341 NUP160Q12769 1436 aa7.35□□□□□ -1.23
ERCC6-213ENST00000624341 SHROOM2Q13796 1616 aa7.35□□□□□ -1.23
ERCC6-213ENST00000624341 GOLGA6L22H0YM25 854 aa7.35□□□□□ -1.23
ERCC6-213ENST00000624341 CCER2I3L3R5 266 aa7.34□□□□□ -1.23
ERCC6-213ENST00000624341 KNSTRNQ9Y448 316 aa7.34□□□□□ -1.23
ERCC6-213ENST00000624341 CEP170Q5SW79 1584 aa7.34□□□□□ -1.23
ERCC6-213ENST00000624341 TPRNQ4KMQ1 711 aa7.33□□□□□ -1.24
ERCC6-213ENST00000624341 FRAT1Q92837 279 aaPredicted RBP7.33□□□□□ -1.24
ERCC6-213ENST00000624341 CUL7Q14999 1698 aa7.33□□□□□ -1.24
ERCC6-213ENST00000624341 CCNB3Q8WWL7 1395 aa7.32□□□□□ -1.24
ERCC6-213ENST00000624341 PLPPR3Q6T4P5 718 aa7.32□□□□□ -1.24
ERCC6-213ENST00000624341 CC2D1BQ5T0F9 858 aaKnown RBP7.32□□□□□ -1.24
ERCC6-213ENST00000624341 ESF1Q9H501 851 aaKnown RBP7.32□□□□□ -1.24
ERCC6-213ENST00000624341 PTMAP06454 111 aaKnown RBP7.32□□□□□ -1.24
ERCC6-213ENST00000624341 FTSJ3Q8IY81 847 aaKnown RBP7.31□□□□□ -1.24
ERCC6-213ENST00000624341 DNTTIP2Q5QJE6 756 aaKnown RBP7.31□□□□□ -1.24
ERCC6-213ENST00000624341 HSPA5P11021 654 aaKnown RBP7.3□□□□□ -1.24
ERCC6-213ENST00000624341 CFDP1Q9UEE9 299 aaPredicted RBP7.3□□□□□ -1.24
ERCC6-213ENST00000624341 KANK4Q5T7N3 995 aaPredicted RBP7.29□□□□□ -1.24
ERCC6-213ENST00000624341 KCNH8Q96L42 1107 aa7.29□□□□□ -1.24
ERCC6-213ENST00000624341 TNNT2P45379 298 aaPredicted RBP7.29□□□□□ -1.24
ERCC6-213ENST00000624341 SPRYD3Q8NCJ5 442 aa7.29□□□□□ -1.24
ERCC6-213ENST00000624341 TIMELESSQ9UNS1 1208 aa7.29□□□□□ -1.24
ERCC6-213ENST00000624341 KIF27Q86VH2 1401 aa7.29□□□□□ -1.24
ERCC6-213ENST00000624341 CFAP53Q96M91 514 aa7.28□□□□□ -1.24
ERCC6-213ENST00000624341 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.28□□□□□ -1.24
ERCC6-213ENST00000624341 NPM1P06748 294 aaKnown RBP eCLIP7.28□□□□□ -1.24
ERCC6-213ENST00000624341 RUSC2Q8N2Y8 1516 aa7.28□□□□□ -1.24
ERCC6-213ENST00000624341 PLEKHD1A6NEE1 506 aa7.28□□□□□ -1.24
ERCC6-213ENST00000624341 PRG4Q92954 1404 aaPredicted RBP7.27□□□□□ -1.25
ERCC6-213ENST00000624341 CDCA8Q53HL2 280 aa7.27□□□□□ -1.25
ERCC6-213ENST00000624341 AEBP2Q6ZN18 517 aaPredicted RBP7.27□□□□□ -1.25
ERCC6-213ENST00000624341 PLCB2Q00722 1185 aa7.27□□□□□ -1.25
ERCC6-213ENST00000624341 ARID4BQ4LE39 1312 aaPredicted RBP7.27□□□□□ -1.25
ERCC6-213ENST00000624341 HSP90AB1P08238 724 aaKnown RBP7.26□□□□□ -1.25
ERCC6-213ENST00000624341 PLEKHG5O94827 1062 aa7.26□□□□□ -1.25
ERCC6-213ENST00000624341 FOXD1Q16676 465 aa7.26□□□□□ -1.25
ERCC6-213ENST00000624341 DCAF11Q8TEB1 546 aa7.25□□□□□ -1.25
ERCC6-213ENST00000624341 KIAA0586Q9BVV6 1533 aa7.25□□□□□ -1.25
ERCC6-213ENST00000624341 SETD5Q9C0A6 1442 aa7.25□□□□□ -1.25
ERCC6-213ENST00000624341 KIF21BO75037 1637 aa7.25□□□□□ -1.25
ERCC6-213ENST00000624341 JPH4Q96JJ6 628 aa7.25□□□□□ -1.25
ERCC6-213ENST00000624341 VPS8Q8N3P4 1428 aa7.24□□□□□ -1.25
ERCC6-213ENST00000624341 SLKQ9H2G2 1235 aaPredicted RBP7.24□□□□□ -1.25
ERCC6-213ENST00000624341 ERCC6L2Q5T890 1561 aa7.24□□□□□ -1.25
ERCC6-213ENST00000624341 MAPKBP1O60336 1514 aa7.24□□□□□ -1.25
ERCC6-213ENST00000624341 IPO9Q96P70 1041 aaKnown RBP7.24□□□□□ -1.25
ERCC6-213ENST00000624341 RCAN3Q9UKA8 241 aa7.24□□□□□ -1.25
ERCC6-213ENST00000624341 MAPK8IP3Q9UPT6 1336 aa7.24□□□□□ -1.25
ERCC6-213ENST00000624341 PPP1R15AO75807 674 aaPredicted RBP7.23□□□□□ -1.25
ERCC6-213ENST00000624341 CASC1Q6TDU7 716 aa7.23□□□□□ -1.25
ERCC6-213ENST00000624341 RAB3GAP2Q9H2M9 1393 aa7.23□□□□□ -1.25
ERCC6-213ENST00000624341 CARMIL2Q6F5E8 1435 aa7.23□□□□□ -1.25
ERCC6-213ENST00000624341 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
ERCC6-213ENST00000624341 L1TD1Q5T7N2 865 aaKnown RBP7.23□□□□□ -1.25
ERCC6-213ENST00000624341 ZBTB7CA1YPR0 619 aa7.23□□□□□ -1.25
ERCC6-213ENST00000624341 U2SURPO15042 1029 aaKnown RBP7.23□□□□□ -1.25
ERCC6-213ENST00000624341 HSCBQ8IWL3 235 aa7.23□□□□□ -1.25
ERCC6-213ENST00000624341 TCERG1O14776 1098 aaKnown RBP7.22□□□□□ -1.25
ERCC6-213ENST00000624341 NUDCQ9Y266 331 aa7.22□□□□□ -1.25
ERCC6-213ENST00000624341 TMF1P82094 1093 aa7.21□□□□□ -1.25
ERCC6-213ENST00000624341 KIF13AQ9H1H9 1805 aa7.21□□□□□ -1.25
ERCC6-213ENST00000624341 C14orf37Q86TY3 774 aa7.21□□□□□ -1.26
ERCC6-213ENST00000624341 ABCC10Q5T3U5 1492 aa7.2□□□□□ -1.26
ERCC6-213ENST00000624341 ZRSR1Q15695 479 aaKnown RBP7.2□□□□□ -1.26
ERCC6-213ENST00000624341 IGF1RP08069 1367 aa7.2□□□□□ -1.26
ERCC6-213ENST00000624341 MSNP26038 577 aaKnown RBP7.2□□□□□ -1.26
ERCC6-213ENST00000624341 CARMIL1Q5VZK9 1371 aa7.2□□□□□ -1.26
ERCC6-213ENST00000624341 PNNQ9H307 717 aaKnown RBP7.19□□□□□ -1.26
ERCC6-213ENST00000624341 MS4A1P11836 297 aa7.19□□□□□ -1.26
ERCC6-213ENST00000624341 IQGAP2Q13576 1575 aa7.19□□□□□ -1.26
ERCC6-213ENST00000624341 ADCY10Q96PN6 1610 aa7.19□□□□□ -1.26
ERCC6-213ENST00000624341 PRXQ9BXM0 1461 aa7.19□□□□□ -1.26
ERCC6-213ENST00000624341 PKD2Q13563 968 aa7.18□□□□□ -1.26
ERCC6-213ENST00000624341 ARID3AQ99856 593 aa7.18□□□□□ -1.26
ERCC6-213ENST00000624341 TAOK2Q9UL54 1235 aa7.18□□□□□ -1.26
ERCC6-213ENST00000624341 UHRF1BP1LA0JNW5 1464 aa7.18□□□□□ -1.26
ERCC6-213ENST00000624341 DIP2BQ9P265 1576 aa7.18□□□□□ -1.26
ERCC6-213ENST00000624341 MPHOSPH9Q99550 1183 aa7.18□□□□□ -1.26
ERCC6-213ENST00000624341 PTPRGP23470 1445 aa7.17□□□□□ -1.26
ERCC6-213ENST00000624341 L3MBTL2Q969R5 705 aa7.17□□□□□ -1.26
ERCC6-213ENST00000624341 KTN1Q86UP2 1357 aaKnown RBP7.17□□□□□ -1.26
ERCC6-213ENST00000624341 CDK11BP21127 795 aaKnown RBP7.17□□□□□ -1.26
ERCC6-213ENST00000624341 PLB1Q6P1J6 1458 aa7.17□□□□□ -1.26
ERCC6-213ENST00000624341 SLC4A3P48751 1232 aa7.17□□□□□ -1.26
ERCC6-213ENST00000624341 FAM69CQ0P6D2 419 aa7.16□□□□□ -1.26
ERCC6-213ENST00000624341 GLI2P10070 1586 aa7.16□□□□□ -1.26
ERCC6-213ENST00000624341 A0A0G2JS52 829 aa7.16□□□□□ -1.26
ERCC6-213ENST00000624341 MORC1Q86VD1 984 aa7.16□□□□□ -1.26
ERCC6-213ENST00000624341 CHMP4BQ9H444 224 aaKnown RBP7.16□□□□□ -1.26
ERCC6-213ENST00000624341 POGKQ9P215 609 aa7.16□□□□□ -1.26
ERCC6-213ENST00000624341 RAPGEF2Q9Y4G8 1499 aa7.16□□□□□ -1.26
ERCC6-213ENST00000624341 APBB1O00213 710 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms