RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

Gene LINC01006, Length 651 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-208ENST00000624071 ZNF777Q9ULD5 760 aaPredicted RBP30.07■■■□□ 2.4
LINC01006-208ENST00000624071 EHBP1L1Q8N3D4 1523 aa30.06■■■□□ 2.4
LINC01006-208ENST00000624071 KDM4FA0A1W2PPD8 638 aa30.06■■■□□ 2.4
LINC01006-208ENST00000624071 GPATCH8Q9UKJ3 1502 aaKnown RBP30.06■■■□□ 2.4
LINC01006-208ENST00000624071 CCNB3Q8WWL7 1395 aa30.05■■■□□ 2.4
LINC01006-208ENST00000624071 TIAM1Q13009 1591 aa30.05■■■□□ 2.4
LINC01006-208ENST00000624071 PREX2Q70Z35 1606 aa30.04■■■□□ 2.4
LINC01006-208ENST00000624071 POGZQ7Z3K3 1410 aa30.03■■■□□ 2.4
LINC01006-208ENST00000624071 CDC42BPBQ9Y5S2 1711 aa30.02■■■□□ 2.4
LINC01006-208ENST00000624071 CFDP1Q9UEE9 299 aaPredicted RBP30.01■■■□□ 2.39
LINC01006-208ENST00000624071 RICTORQ6R327 1708 aa30.01■■■□□ 2.39
LINC01006-208ENST00000624071 KANK4Q5T7N3 995 aaPredicted RBP30■■■□□ 2.39
LINC01006-208ENST00000624071 AFAP1Q8N556 730 aa30■■■□□ 2.39
LINC01006-208ENST00000624071 CDC42BPAQ5VT25 1732 aa29.99■■■□□ 2.39
LINC01006-208ENST00000624071 APLP2Q06481 763 aa29.97■■■□□ 2.39
LINC01006-208ENST00000624071 LRRC9Q6ZRR7 1453 aa29.96■■■□□ 2.39
LINC01006-208ENST00000624071 YEATS2Q9ULM3 1422 aa29.95■■■□□ 2.38
LINC01006-208ENST00000624071 NCOA2Q15596 1464 aa29.94■■■□□ 2.38
LINC01006-208ENST00000624071 ARHGEF12Q9NZN5 1544 aa29.94■■■□□ 2.38
LINC01006-208ENST00000624071 ZMYM4Q5VZL5 1548 aa29.93■■■□□ 2.38
LINC01006-208ENST00000624071 MYT1LQ9UL68 1186 aa29.93■■■□□ 2.38
LINC01006-208ENST00000624071 TRAPPC8Q9Y2L5 1435 aa29.92■■■□□ 2.38
LINC01006-208ENST00000624071 ABCC1P33527 1531 aa29.91■■■□□ 2.38
LINC01006-208ENST00000624071 MAP3K1Q13233 1512 aa29.91■■■□□ 2.38
LINC01006-208ENST00000624071 HNRNPMP52272 730 aaKnown RBP eCLIP29.91■■■□□ 2.382e-6■■■□□ 16.4
LINC01006-208ENST00000624071 ZNF518AQ6AHZ1 1483 aa29.91■■■□□ 2.38
LINC01006-208ENST00000624071 ARID4BQ4LE39 1312 aaPredicted RBP29.91■■■□□ 2.38
LINC01006-208ENST00000624071 ZFYVE16Q7Z3T8 1539 aa29.9■■■□□ 2.38
LINC01006-208ENST00000624071 ARHGEF40Q8TER5 1519 aa29.89■■■□□ 2.38
LINC01006-208ENST00000624071 ZNF644Q9H582 1327 aaPredicted RBP29.89■■■□□ 2.38
LINC01006-208ENST00000624071 SAMD9LQ8IVG5 1584 aa29.89■■■□□ 2.38
LINC01006-208ENST00000624071 MAGI2Q86UL8 1455 aa29.88■■■□□ 2.37
LINC01006-208ENST00000624071 SUPT6HQ7KZ85 1726 aaKnown RBP29.88■■■□□ 2.37
LINC01006-208ENST00000624071 SYCP2Q9BX26 1530 aa29.83■■■□□ 2.37
LINC01006-208ENST00000624071 ITSN2Q9NZM3 1697 aa29.82■■■□□ 2.36
LINC01006-208ENST00000624071 KDM5CP41229 1560 aa29.81■■■□□ 2.36
LINC01006-208ENST00000624071 PLEKHH2Q8IVE3 1493 aa29.8■■■□□ 2.36
LINC01006-208ENST00000624071 KIAA1107Q9UPP5 1409 aa29.79■■■□□ 2.36
LINC01006-208ENST00000624071 ATP10AO60312 1499 aa29.78■■■□□ 2.36
LINC01006-208ENST00000624071 MLH3Q9UHC1 1453 aa29.76■■■□□ 2.35
LINC01006-208ENST00000624071 SPAG9O60271 1321 aaKnown RBP29.75■■■□□ 2.35
LINC01006-208ENST00000624071 HECW2Q9P2P5 1572 aa29.75■■■□□ 2.35
LINC01006-208ENST00000624071 MLECQ14165 292 aa29.74■■■□□ 2.35
LINC01006-208ENST00000624071 C9orf84Q5VXU9 1444 aa29.72■■■□□ 2.35
LINC01006-208ENST00000624071 CAMSAP2Q08AD1 1489 aa29.7■■■□□ 2.35
LINC01006-208ENST00000624071 MBD5Q9P267 1494 aa29.7■■■□□ 2.35
LINC01006-208ENST00000624071 DIP2CQ9Y2E4 1556 aa29.69■■■□□ 2.34
LINC01006-208ENST00000624071 SIGLEC1Q9BZZ2 1709 aa29.68■■■□□ 2.34
LINC01006-208ENST00000624071 MYOM3Q5VTT5 1437 aa29.68■■■□□ 2.34
LINC01006-208ENST00000624071 ABCA6Q8N139 1617 aa29.66■■■□□ 2.34
LINC01006-208ENST00000624071 BCORL1Q5H9F3 1711 aa29.65■■■□□ 2.34
LINC01006-208ENST00000624071 KIDINS220Q9ULH0 1771 aa29.63■■■□□ 2.33
LINC01006-208ENST00000624071 ADAMTSL3P82987 1691 aa29.63■■■□□ 2.33
LINC01006-208ENST00000624071 MIA2Q96PC5 1412 aa29.61■■■□□ 2.33
LINC01006-208ENST00000624071 ATP7AQ04656 1500 aa29.61■■■□□ 2.33
LINC01006-208ENST00000624071 CCDC141Q6ZP82 1450 aa29.59■■■□□ 2.33
LINC01006-208ENST00000624071 RSPH4AQ5TD94 716 aa29.58■■■□□ 2.33
LINC01006-208ENST00000624071 PPARGC1BQ86YN6 1023 aaKnown RBP29.58■■■□□ 2.33
LINC01006-208ENST00000624071 MADDQ8WXG6 1647 aa29.58■■■□□ 2.33
LINC01006-208ENST00000624071 INO80Q9ULG1 1556 aaPredicted RBP29.56■■■□□ 2.32
LINC01006-208ENST00000624071 PLPPR3Q6T4P5 718 aa29.56■■■□□ 2.32
LINC01006-208ENST00000624071 PTPRMP28827 1452 aa29.55■■■□□ 2.32
LINC01006-208ENST00000624071 REREQ9P2R6 1566 aa29.55■■■□□ 2.32
LINC01006-208ENST00000624071 TSPY4P0CV99 314 aa29.53■■■□□ 2.32
LINC01006-208ENST00000624071 TSPY10P0CW01 314 aa29.53■■■□□ 2.32
LINC01006-208ENST00000624071 RTEL1-TNFRSF6BF6WH68 1400 aa29.52■■■□□ 2.32
LINC01006-208ENST00000624071 FGD6Q6ZV73 1430 aa29.51■■■□□ 2.31
LINC01006-208ENST00000624071 A2MP01023 1474 aa29.5■■■□□ 2.31
LINC01006-208ENST00000624071 ARHGEF5Q12774 1597 aa29.5■■■□□ 2.31
LINC01006-208ENST00000624071 AGLP35573 1532 aa29.49■■■□□ 2.31
LINC01006-208ENST00000624071 RIMS1Q86UR5 1692 aaKnown RBP29.47■■■□□ 2.31
LINC01006-208ENST00000624071 PTPN23Q9H3S7 1636 aa29.45■■■□□ 2.31
LINC01006-208ENST00000624071 FAM50AQ14320 339 aaKnown RBP29.42■■■□□ 2.3
LINC01006-208ENST00000624071 DHX29Q7Z478 1369 aaKnown RBP29.41■■■□□ 2.3
LINC01006-208ENST00000624071 ESF1Q9H501 851 aaKnown RBP29.41■■■□□ 2.3
LINC01006-208ENST00000624071 TCOF1Q13428 1488 aaKnown RBP29.41■■■□□ 2.3
LINC01006-208ENST00000624071 ABCC5O15440 1437 aa29.4■■■□□ 2.3
LINC01006-208ENST00000624071 CEBPAP49715 358 aaPredicted RBP29.4■■■□□ 2.3
LINC01006-208ENST00000624071 GGT6Q6P531 493 aa29.4■■■□□ 2.3
LINC01006-208ENST00000624071 PLXNC1O60486 1568 aa29.39■■■□□ 2.3
LINC01006-208ENST00000624071 FER1L4A9Z1Z3 1794 aa29.39■■■□□ 2.29
LINC01006-208ENST00000624071 ADGBQ8N7X0 1667 aa29.37■■■□□ 2.29
LINC01006-208ENST00000624071 KIF3BO15066 747 aa29.35■■■□□ 2.29
LINC01006-208ENST00000624071 DAPK1P53355 1430 aa29.35■■■□□ 2.29
LINC01006-208ENST00000624071 CHIC2Q9UKJ5 165 aa29.33■■■□□ 2.29
LINC01006-208ENST00000624071 MAST1Q9Y2H9 1570 aa29.33■■■□□ 2.29
LINC01006-208ENST00000624071 RRP7BPQ9NSQ0 103 aa29.3■■■□□ 2.28
LINC01006-208ENST00000624071 DNMT1P26358 1616 aaKnown RBP29.27■■■□□ 2.28
LINC01006-208ENST00000624071 SHANK2Q9UPX8 1470 aa29.27■■■□□ 2.28
LINC01006-208ENST00000624071 CNTLNQ9NXG0 1405 aa29.26■■■□□ 2.27
LINC01006-208ENST00000624071 KIF15Q9NS87 1388 aa29.25■■■□□ 2.27
LINC01006-208ENST00000624071 CROCC2H7BZ55 1655 aa29.21■■■□□ 2.27
LINC01006-208ENST00000624071 PPP6R1Q9UPN7 881 aa29.21■■■□□ 2.27
LINC01006-208ENST00000624071 ZMYM3Q14202 1370 aa29.21■■■□□ 2.27
LINC01006-208ENST00000624071 ANKRD30AQ9BXX3 1397 aa29.19■■■□□ 2.26
LINC01006-208ENST00000624071 ITGAEP38570 1179 aa29.18■■■□□ 2.26
LINC01006-208ENST00000624071 DUOX2Q9NRD8 1548 aa29.18■■■□□ 2.26
LINC01006-208ENST00000624071 LMTK3Q96Q04 1460 aa29.17■■■□□ 2.26
LINC01006-208ENST00000624071 WASHC2CQ9Y4E1 1318 aa29.16■■■□□ 2.26
LINC01006-208ENST00000624071 C3P01024 1663 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms