RNA–Protein interactions for RNA: ENST00000623548.1

LINC00216-201, long intergenic non-protein coding RNA 216, humanhuman

BASIC

Gene LINC00216, Length 1,126 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00216-201ENST00000623548 POTEMA6NI47 508 aa11.94□□□□□ -0.5
LINC00216-201ENST00000623548 SLAIN1Q8ND83 568 aa11.94□□□□□ -0.5
LINC00216-201ENST00000623548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00216-201ENST00000623548 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
LINC00216-201ENST00000623548 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
LINC00216-201ENST00000623548 TULP1O00294 542 aaPredicted RBP11.9□□□□□ -0.5
LINC00216-201ENST00000623548 E2F4Q16254 413 aa11.9□□□□□ -0.5
LINC00216-201ENST00000623548 L3MBTL3Q96JM7 780 aaPredicted RBP11.9□□□□□ -0.5
LINC00216-201ENST00000623548 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.9□□□□□ -0.5
LINC00216-201ENST00000623548 PDCD7Q8N8D1 485 aaKnown RBP11.88□□□□□ -0.51
LINC00216-201ENST00000623548 PDE4AP27815 886 aa11.87□□□□□ -0.51
LINC00216-201ENST00000623548 MS4A4AQ96JQ5 239 aa11.87□□□□□ -0.51
LINC00216-201ENST00000623548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC00216-201ENST00000623548 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
LINC00216-201ENST00000623548 LMOD2Q6P5Q4 547 aa11.83□□□□□ -0.52
LINC00216-201ENST00000623548 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
LINC00216-201ENST00000623548 NCKAP5LQ9HCH0 1330 aa11.83□□□□□ -0.52
LINC00216-201ENST00000623548 MFSD10Q14728 455 aa11.82□□□□□ -0.52
LINC00216-201ENST00000623548 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
LINC00216-201ENST00000623548 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
LINC00216-201ENST00000623548 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
LINC00216-201ENST00000623548 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
LINC00216-201ENST00000623548 G3V3G9 751 aa11.79□□□□□ -0.52
LINC00216-201ENST00000623548 SNPHO15079 494 aa11.79□□□□□ -0.52
LINC00216-201ENST00000623548 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
LINC00216-201ENST00000623548 PLSCR2Q9NRY7 297 aa11.78□□□□□ -0.52
LINC00216-201ENST00000623548 DPY19L2Q6NUT2 758 aa11.76□□□□□ -0.53
LINC00216-201ENST00000623548 ARIH1Q9Y4X5 557 aaPredicted RBP11.76□□□□□ -0.53
LINC00216-201ENST00000623548 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
LINC00216-201ENST00000623548 ST18O60284 1047 aa11.74□□□□□ -0.53
LINC00216-201ENST00000623548 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
LINC00216-201ENST00000623548 CAMK2BQ13554 666 aa11.72□□□□□ -0.53
LINC00216-201ENST00000623548 SMYD5Q6GMV2 418 aa11.72□□□□□ -0.53
LINC00216-201ENST00000623548 SEMA3EO15041 775 aa11.71□□□□□ -0.53
LINC00216-201ENST00000623548 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
LINC00216-201ENST00000623548 GPHNQ9NQX3 736 aaPredicted RBP11.67□□□□□ -0.54
LINC00216-201ENST00000623548 PPP1R15BQ5SWA1 713 aa11.64□□□□□ -0.55
LINC00216-201ENST00000623548 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
LINC00216-201ENST00000623548 TMEM132AQ24JP5 1023 aa11.62□□□□□ -0.55
LINC00216-201ENST00000623548 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
LINC00216-201ENST00000623548 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
LINC00216-201ENST00000623548 TMC2Q8TDI7 906 aa11.58□□□□□ -0.56
LINC00216-201ENST00000623548 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
LINC00216-201ENST00000623548 FOXK1P85037 733 aa11.55□□□□□ -0.56
LINC00216-201ENST00000623548 MARVELD3Q96A59 401 aa11.55□□□□□ -0.56
LINC00216-201ENST00000623548 DSG2Q14126 1118 aa11.54□□□□□ -0.56
LINC00216-201ENST00000623548 ZMYND10O75800 440 aa11.53□□□□□ -0.56
LINC00216-201ENST00000623548 EMP3P54852 163 aa11.52□□□□□ -0.57
LINC00216-201ENST00000623548 PDIA6Q15084 440 aa11.51□□□□□ -0.57
LINC00216-201ENST00000623548 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
LINC00216-201ENST00000623548 DPYSL4O14531 572 aa11.5□□□□□ -0.57
LINC00216-201ENST00000623548 BRPF1P55201 1214 aaPredicted RBP11.5□□□□□ -0.57
LINC00216-201ENST00000623548 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
LINC00216-201ENST00000623548 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
LINC00216-201ENST00000623548 ZNF710Q8N1W2 664 aa11.5□□□□□ -0.57
LINC00216-201ENST00000623548 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
LINC00216-201ENST00000623548 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
LINC00216-201ENST00000623548 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
LINC00216-201ENST00000623548 BARGINQ6ZT62 677 aa11.48□□□□□ -0.57
LINC00216-201ENST00000623548 MLLT3P42568 568 aaPredicted RBP11.47□□□□□ -0.57
LINC00216-201ENST00000623548 GPIHBP1Q8IV16 184 aa11.47□□□□□ -0.57
LINC00216-201ENST00000623548 RIMBP2O15034 1052 aa11.46□□□□□ -0.57
LINC00216-201ENST00000623548 PLPP6Q8IY26 295 aa11.46□□□□□ -0.57
LINC00216-201ENST00000623548 C2orf72A6NCS6 295 aa11.45□□□□□ -0.58
LINC00216-201ENST00000623548 KIF3CO14782 793 aa11.45□□□□□ -0.58
LINC00216-201ENST00000623548 NEUROD2Q15784 382 aa11.44□□□□□ -0.58
LINC00216-201ENST00000623548 RBM26Q5T8P6 1007 aaKnown RBP11.44□□□□□ -0.58
LINC00216-201ENST00000623548 TMEM92Q6UXU6 159 aa11.44□□□□□ -0.58
LINC00216-201ENST00000623548 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
LINC00216-201ENST00000623548 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
LINC00216-201ENST00000623548 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
LINC00216-201ENST00000623548 AK7Q96M32 723 aa11.4□□□□□ -0.58
LINC00216-201ENST00000623548 MAP3K9P80192 1104 aa11.39□□□□□ -0.59
LINC00216-201ENST00000623548 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
LINC00216-201ENST00000623548 KRI1Q8N9T8 703 aaKnown RBP11.37□□□□□ -0.59
LINC00216-201ENST00000623548 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
LINC00216-201ENST00000623548 ERBB3P21860 1342 aa11.35□□□□□ -0.59
LINC00216-201ENST00000623548 POTEB3A0JP26 581 aa11.35□□□□□ -0.59
LINC00216-201ENST00000623548 POTEBQ6S5H4 581 aa11.35□□□□□ -0.59
LINC00216-201ENST00000623548 TIMELESSQ9UNS1 1208 aa11.35□□□□□ -0.59
LINC00216-201ENST00000623548 OXER1Q8TDS5 423 aa11.32□□□□□ -0.6
LINC00216-201ENST00000623548 TBC1D12O60347 775 aa11.31□□□□□ -0.6
LINC00216-201ENST00000623548 PTGER2P43116 358 aa11.31□□□□□ -0.6
LINC00216-201ENST00000623548 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
LINC00216-201ENST00000623548 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
LINC00216-201ENST00000623548 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
LINC00216-201ENST00000623548 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00216-201ENST00000623548 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
LINC00216-201ENST00000623548 GPR37O15354 613 aa11.28□□□□□ -0.6
LINC00216-201ENST00000623548 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
LINC00216-201ENST00000623548 TRIM66O15016 1216 aa11.26□□□□□ -0.61
LINC00216-201ENST00000623548 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
LINC00216-201ENST00000623548 VARS2Q5ST30 1063 aaKnown RBP11.26□□□□□ -0.61
LINC00216-201ENST00000623548 KRTAP3-3Q9BYR6 98 aa11.26□□□□□ -0.61
LINC00216-201ENST00000623548 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
LINC00216-201ENST00000623548 NUTM2FA1L443 756 aa11.25□□□□□ -0.61
LINC00216-201ENST00000623548 OSBPP22059 807 aa11.25□□□□□ -0.61
LINC00216-201ENST00000623548 MINK1Q8N4C8 1332 aaPredicted RBP11.25□□□□□ -0.61
LINC00216-201ENST00000623548 PTCD2Q8WV60 388 aaKnown RBP11.24□□□□□ -0.61
LINC00216-201ENST00000623548 PDE4DQ08499 809 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms