RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PPP1R1BQ9UD71 204 aaPredicted RBP8□□□□□ -1.13
CDKL5-205ENST00000623535 A0A0U1RQG5 324 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-205ENST00000623535 HTATSF1O43719 755 aaKnown RBP7.99□□□□□ -1.13
CDKL5-205ENST00000623535 SPAG9O60271 1321 aaKnown RBP7.99□□□□□ -1.13
CDKL5-205ENST00000623535 CALD1Q05682 793 aaKnown RBP7.99□□□□□ -1.13
CDKL5-205ENST00000623535 HDGFL2Q7Z4V5 671 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-205ENST00000623535 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDKL5-205ENST00000623535 SMC4Q9NTJ3 1288 aa7.98□□□□□ -1.13
CDKL5-205ENST00000623535 KIAA1211Q6ZU35 1233 aa7.97□□□□□ -1.13
CDKL5-205ENST00000623535 CHIC2Q9UKJ5 165 aa7.97□□□□□ -1.13
CDKL5-205ENST00000623535 CHMP3Q9Y3E7 222 aa7.97□□□□□ -1.13
CDKL5-205ENST00000623535 CFDP1Q9UEE9 299 aaPredicted RBP7.97□□□□□ -1.13
CDKL5-205ENST00000623535 RB1CC1Q8TDY2 1594 aa7.96□□□□□ -1.13
CDKL5-205ENST00000623535 TMEM87AQ8NBN3 555 aa7.96□□□□□ -1.13
CDKL5-205ENST00000623535 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.96□□□□□ -1.13
CDKL5-205ENST00000623535 TPM4P67936 248 aa7.96□□□□□ -1.13
CDKL5-205ENST00000623535 RBM33Q96EV2 1170 aaKnown RBP7.95□□□□□ -1.14
CDKL5-205ENST00000623535 SOX12O15370 315 aa7.95□□□□□ -1.14
CDKL5-205ENST00000623535 SCRIBQ14160 1630 aa7.95□□□□□ -1.14
CDKL5-205ENST00000623535 WWC1Q8IX03 1113 aa7.95□□□□□ -1.14
CDKL5-205ENST00000623535 LRRFIP1Q32MZ4 808 aaKnown RBP7.95□□□□□ -1.14
CDKL5-205ENST00000623535 DNTTIP2Q5QJE6 756 aaKnown RBP7.94□□□□□ -1.14
CDKL5-205ENST00000623535 CHMP4CQ96CF2 233 aa7.94□□□□□ -1.14
CDKL5-205ENST00000623535 SPDYE4A6NLX3 237 aa7.94□□□□□ -1.14
CDKL5-205ENST00000623535 SALL2Q9Y467 1007 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-205ENST00000623535 HSP90B1P14625 803 aaKnown RBP7.93□□□□□ -1.14
CDKL5-205ENST00000623535 C16orf71Q8IYS4 520 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-205ENST00000623535 VPS37DQ86XT2 251 aa7.93□□□□□ -1.14
CDKL5-205ENST00000623535 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
CDKL5-205ENST00000623535 CCDC136Q96JN2 1154 aa7.92□□□□□ -1.14
CDKL5-205ENST00000623535 U2SURPO15042 1029 aaKnown RBP7.92□□□□□ -1.14
CDKL5-205ENST00000623535 PAXIP1Q6ZW49 1069 aaPredicted RBP7.92□□□□□ -1.14
CDKL5-205ENST00000623535 NGDNQ8NEJ9 315 aaKnown RBP7.92□□□□□ -1.14
CDKL5-205ENST00000623535 ATF3P18847 181 aa7.92□□□□□ -1.14
CDKL5-205ENST00000623535 PPM1FP49593 454 aaPredicted RBP7.92□□□□□ -1.14
CDKL5-205ENST00000623535 CARMIL2Q6F5E8 1435 aa7.91□□□□□ -1.14
CDKL5-205ENST00000623535 TRIM21P19474 475 aaKnown RBP7.91□□□□□ -1.14
CDKL5-205ENST00000623535 HRCP23327 699 aa7.91□□□□□ -1.14
CDKL5-205ENST00000623535 TPM2P07951 284 aa7.91□□□□□ -1.14
CDKL5-205ENST00000623535 RGL3Q3MIN7 710 aa7.91□□□□□ -1.14
CDKL5-205ENST00000623535 RAD21O60216 631 aa7.91□□□□□ -1.14
CDKL5-205ENST00000623535 FAM9BQ8IZU0 186 aa7.91□□□□□ -1.14
CDKL5-205ENST00000623535 STK31Q9BXU1 1019 aa7.91□□□□□ -1.14
CDKL5-205ENST00000623535 AKAP17AQ02040 695 aaKnown RBP7.9□□□□□ -1.14
CDKL5-205ENST00000623535 NBR1Q14596 966 aa7.9□□□□□ -1.14
CDKL5-205ENST00000623535 RDXP35241 583 aaKnown RBP7.9□□□□□ -1.14
CDKL5-205ENST00000623535 KIF3AQ9Y496 699 aa7.9□□□□□ -1.14
CDKL5-205ENST00000623535 GGT6Q6P531 493 aa7.89□□□□□ -1.15
CDKL5-205ENST00000623535 DNAI2Q9GZS0 605 aa7.88□□□□□ -1.15
CDKL5-205ENST00000623535 TOMM22Q9NS69 142 aa7.88□□□□□ -1.15
CDKL5-205ENST00000623535 C1orf141Q5JVX7 400 aa7.88□□□□□ -1.15
CDKL5-205ENST00000623535 PDE4CQ08493 712 aa7.88□□□□□ -1.15
CDKL5-205ENST00000623535 TMEM132AQ24JP5 1023 aa7.88□□□□□ -1.15
CDKL5-205ENST00000623535 TTC5Q8N0Z6 440 aa7.88□□□□□ -1.15
CDKL5-205ENST00000623535 SYTL4Q96C24 671 aaPredicted RBP7.88□□□□□ -1.15
CDKL5-205ENST00000623535 ODF2Q5BJF6 829 aa7.87□□□□□ -1.15
CDKL5-205ENST00000623535 VSIG10Q8N0Z9 540 aa7.87□□□□□ -1.15
CDKL5-205ENST00000623535 NOP2P46087 812 aaKnown RBP7.87□□□□□ -1.15
CDKL5-205ENST00000623535 PLCB2Q00722 1185 aa7.87□□□□□ -1.15
CDKL5-205ENST00000623535 HNRNPUQ00839 825 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDKL5-205ENST00000623535 CCDC47Q96A33 483 aaKnown RBP7.87□□□□□ -1.15
CDKL5-205ENST00000623535 AMPHP49418 695 aa7.86□□□□□ -1.15
CDKL5-205ENST00000623535 TPRNQ4KMQ1 711 aa7.86□□□□□ -1.15
CDKL5-205ENST00000623535 EIF3AQ14152 1382 aaKnown RBP7.86□□□□□ -1.15
CDKL5-205ENST00000623535 SYNE3Q6ZMZ3 975 aa7.86□□□□□ -1.15
CDKL5-205ENST00000623535 IPO8O15397 1037 aaKnown RBP7.85□□□□□ -1.15
CDKL5-205ENST00000623535 MRS2Q9HD23 443 aa7.85□□□□□ -1.15
CDKL5-205ENST00000623535 DHX16O60231 1041 aaKnown RBP7.85□□□□□ -1.15
CDKL5-205ENST00000623535 TSR1Q2NL82 804 aaKnown RBP7.85□□□□□ -1.15
CDKL5-205ENST00000623535 TPM3P06753 285 aa7.85□□□□□ -1.15
CDKL5-205ENST00000623535 DRC7Q8IY82 874 aa7.84□□□□□ -1.15
CDKL5-205ENST00000623535 LMOD3Q0VAK6 560 aa7.84□□□□□ -1.15
CDKL5-205ENST00000623535 FBXO3Q9UK99 471 aa7.84□□□□□ -1.15
CDKL5-205ENST00000623535 BEGAINQ9BUH8 593 aa7.83□□□□□ -1.16
CDKL5-205ENST00000623535 TERF2IPQ9NYB0 399 aa7.83□□□□□ -1.16
CDKL5-205ENST00000623535 GOLGA6L1Q8N7Z2 621 aa7.83□□□□□ -1.16
CDKL5-205ENST00000623535 CCNB3Q8WWL7 1395 aa7.83□□□□□ -1.16
CDKL5-205ENST00000623535 TMF1P82094 1093 aa7.83□□□□□ -1.16
CDKL5-205ENST00000623535 ERICH6BQ5W0A0 696 aa7.83□□□□□ -1.16
CDKL5-205ENST00000623535 RFX1P22670 979 aa7.82□□□□□ -1.16
CDKL5-205ENST00000623535 HSP90AB1P08238 724 aaKnown RBP7.82□□□□□ -1.16
CDKL5-205ENST00000623535 DESP17661 470 aa7.82□□□□□ -1.16
CDKL5-205ENST00000623535 NEXNQ0ZGT2 675 aa7.82□□□□□ -1.16
CDKL5-205ENST00000623535 CARD11Q9BXL7 1154 aa7.82□□□□□ -1.16
CDKL5-205ENST00000623535 HMMRO75330 724 aa7.82□□□□□ -1.16
CDKL5-205ENST00000623535 CT47A1Q5JQC4 288 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-205ENST00000623535 OSCARQ8IYS5 282 aa7.81□□□□□ -1.16
CDKL5-205ENST00000623535 CCDC97Q96F63 343 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-205ENST00000623535 CSPP1Q1MSJ5 1256 aa7.81□□□□□ -1.16
CDKL5-205ENST00000623535 STK26Q9P289 416 aa7.81□□□□□ -1.16
CDKL5-205ENST00000623535 IL27Q8NEV9 243 aa7.81□□□□□ -1.16
CDKL5-205ENST00000623535 MORC1Q86VD1 984 aa7.81□□□□□ -1.16
CDKL5-205ENST00000623535 CEP162Q5TB80 1403 aa7.81□□□□□ -1.16
CDKL5-205ENST00000623535 WDR70Q9NW82 654 aa7.8□□□□□ -1.16
CDKL5-205ENST00000623535 CPLX2Q6PUV4 134 aaKnown RBP7.8□□□□□ -1.16
CDKL5-205ENST00000623535 TPD52L1Q16890 204 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-205ENST00000623535 EFCAB2Q5VUJ9 269 aa7.8□□□□□ -1.16
CDKL5-205ENST00000623535 PSME1Q06323 249 aa7.8□□□□□ -1.16
CDKL5-205ENST00000623535 TPM1P09493 284 aa7.79□□□□□ -1.16
CDKL5-205ENST00000623535 EIF4G1Q04637 1599 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms