RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 CRISPLD2Q9H0B8 497 aa8.92□□□□□ -0.98
ATRX-209ENST00000623242 WDR70Q9NW82 654 aa8.91□□□□□ -0.98
ATRX-209ENST00000623242 PRKCSHP14314 528 aaPredicted RBP8.89□□□□□ -0.99
ATRX-209ENST00000623242 NBR1Q14596 966 aa8.89□□□□□ -0.99
ATRX-209ENST00000623242 MFSD10Q14728 455 aa8.89□□□□□ -0.99
ATRX-209ENST00000623242 MICALL2Q8IY33 904 aa8.88□□□□□ -0.99
ATRX-209ENST00000623242 LARP6Q9BRS8 491 aaKnown RBP8.88□□□□□ -0.99
ATRX-209ENST00000623242 PDE4AP27815 886 aa8.87□□□□□ -0.99
ATRX-209ENST00000623242 P3H3Q8IVL6 736 aa8.87□□□□□ -0.99
ATRX-209ENST00000623242 E2F4Q16254 413 aa8.85□□□□□ -0.99
ATRX-209ENST00000623242 SLAIN1Q8ND83 568 aa8.85□□□□□ -0.99
ATRX-209ENST00000623242 TMEM121BQ9BXQ6 578 aaPredicted RBP8.85□□□□□ -0.99
ATRX-209ENST00000623242 L3MBTL3Q96JM7 780 aaPredicted RBP8.84□□□□□ -0.99
ATRX-209ENST00000623242 DDX27Q96GQ7 796 aaKnown RBP8.83□□□□□ -1
ATRX-209ENST00000623242 BOLA1Q9Y3E2 137 aa8.83□□□□□ -1
ATRX-209ENST00000623242 G3V3G9 751 aa8.82□□□□□ -1
ATRX-209ENST00000623242 FAM163AQ96GL9 167 aaPredicted RBP8.82□□□□□ -1
ATRX-209ENST00000623242 GPHNQ9NQX3 736 aaPredicted RBP8.82□□□□□ -1
ATRX-209ENST00000623242 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.82□□□□□ -1
ATRX-209ENST00000623242 TPRNQ4KMQ1 711 aa8.81□□□□□ -1
ATRX-209ENST00000623242 C3orf67Q6ZVT6 689 aa8.81□□□□□ -1
ATRX-209ENST00000623242 CAMK2BQ13554 666 aa8.8□□□□□ -1
ATRX-209ENST00000623242 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
ATRX-209ENST00000623242 ARHGEF1Q92888 912 aaKnown RBP8.8□□□□□ -1
ATRX-209ENST00000623242 POTEMA6NI47 508 aa8.78□□□□□ -1
ATRX-209ENST00000623242 KIF3CO14782 793 aa8.78□□□□□ -1
ATRX-209ENST00000623242 DSG2Q14126 1118 aa8.78□□□□□ -1
ATRX-209ENST00000623242 PPP1R15BQ5SWA1 713 aa8.78□□□□□ -1
ATRX-209ENST00000623242 TMEM92Q6UXU6 159 aa8.78□□□□□ -1
ATRX-209ENST00000623242 C2orf72A6NCS6 295 aa8.76□□□□□ -1.01
ATRX-209ENST00000623242 POTEGQ6S5H5 508 aa8.76□□□□□ -1.01
ATRX-209ENST00000623242 ARIH1Q9Y4X5 557 aaPredicted RBP8.76□□□□□ -1.01
ATRX-209ENST00000623242 FOXK1P85037 733 aa8.75□□□□□ -1.01
ATRX-209ENST00000623242 TMC2Q8TDI7 906 aa8.74□□□□□ -1.01
ATRX-209ENST00000623242 EMILIN3Q9NT22 766 aa8.74□□□□□ -1.01
ATRX-209ENST00000623242 PCDH10Q9P2E7 1040 aa8.74□□□□□ -1.01
ATRX-209ENST00000623242 SEMA3EO15041 775 aa8.73□□□□□ -1.01
ATRX-209ENST00000623242 SNPHO15079 494 aa8.73□□□□□ -1.01
ATRX-209ENST00000623242 PLPP6Q8IY26 295 aa8.72□□□□□ -1.01
ATRX-209ENST00000623242 TESPA1A2RU30 521 aaPredicted RBP8.71□□□□□ -1.02
ATRX-209ENST00000623242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATRX-209ENST00000623242 DPYSL4O14531 572 aa8.68□□□□□ -1.02
ATRX-209ENST00000623242 ST18O60284 1047 aa8.68□□□□□ -1.02
ATRX-209ENST00000623242 LMOD2Q6P5Q4 547 aa8.67□□□□□ -1.02
ATRX-209ENST00000623242 MLLT3P42568 568 aaPredicted RBP8.63□□□□□ -1.03
ATRX-209ENST00000623242 PDIA6Q15084 440 aa8.62□□□□□ -1.03
ATRX-209ENST00000623242 OXER1Q8TDS5 423 aa8.61□□□□□ -1.03
ATRX-209ENST00000623242 UPF1Q92900 1129 aaKnown RBP eCLIP8.61□□□□□ -1.03
ATRX-209ENST00000623242 PLSCR2Q9NRY7 297 aa8.61□□□□□ -1.03
ATRX-209ENST00000623242 NISCHQ9Y2I1 1504 aa8.6□□□□□ -1.03
ATRX-209ENST00000623242 SPDYE16A6NNV3 312 aaPredicted RBP8.59□□□□□ -1.03
ATRX-209ENST00000623242 MAP3K9P80192 1104 aa8.57□□□□□ -1.04
ATRX-209ENST00000623242 MARVELD3Q96A59 401 aa8.57□□□□□ -1.04
ATRX-209ENST00000623242 HOXB3P14651 431 aaPredicted RBP8.56□□□□□ -1.04
ATRX-209ENST00000623242 ZNF710Q8N1W2 664 aa8.56□□□□□ -1.04
ATRX-209ENST00000623242 ZC3H15Q8WU90 426 aaKnown RBP8.56□□□□□ -1.04
ATRX-209ENST00000623242 TULP1O00294 542 aaPredicted RBP8.55□□□□□ -1.04
ATRX-209ENST00000623242 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
ATRX-209ENST00000623242 SMYD5Q6GMV2 418 aa8.55□□□□□ -1.04
ATRX-209ENST00000623242 PTCD2Q8WV60 388 aaKnown RBP8.55□□□□□ -1.04
ATRX-209ENST00000623242 SLC34A2O95436 690 aa8.54□□□□□ -1.04
ATRX-209ENST00000623242 DOK7Q18PE1 504 aa8.54□□□□□ -1.04
ATRX-209ENST00000623242 CDAN1Q8IWY9 1227 aa8.54□□□□□ -1.04
ATRX-209ENST00000623242 EMP3P54852 163 aa8.53□□□□□ -1.04
ATRX-209ENST00000623242 RIMBP2O15034 1052 aa8.51□□□□□ -1.05
ATRX-209ENST00000623242 EVI5O60447 810 aa8.51□□□□□ -1.05
ATRX-209ENST00000623242 ZSWIM6Q9HCJ5 1215 aa8.51□□□□□ -1.05
ATRX-209ENST00000623242 GRXCR2A6NFK2 248 aa8.5□□□□□ -1.05
ATRX-209ENST00000623242 HOXB1P14653 301 aaPredicted RBP8.5□□□□□ -1.05
ATRX-209ENST00000623242 PTGER2P43116 358 aa8.5□□□□□ -1.05
ATRX-209ENST00000623242 PRIM1P49642 420 aaKnown RBP8.49□□□□□ -1.05
ATRX-209ENST00000623242 DDX12PQ92771 950 aa8.49□□□□□ -1.05
ATRX-209ENST00000623242 FAM205CA6NFA0 338 aa8.48□□□□□ -1.05
ATRX-209ENST00000623242 TBC1D12O60347 775 aa8.48□□□□□ -1.05
ATRX-209ENST00000623242 ZMYND10O75800 440 aa8.48□□□□□ -1.05
ATRX-209ENST00000623242 OSBPP22059 807 aa8.48□□□□□ -1.05
ATRX-209ENST00000623242 ANO8Q9HCE9 1232 aaPredicted RBP8.48□□□□□ -1.05
ATRX-209ENST00000623242 PCDHGA4Q9Y5G9 962 aa8.48□□□□□ -1.05
ATRX-209ENST00000623242 KDM4FA0A1W2PPD8 638 aa8.47□□□□□ -1.05
ATRX-209ENST00000623242 GPR37O15354 613 aa8.47□□□□□ -1.05
ATRX-209ENST00000623242 GPIHBP1Q8IV16 184 aa8.46□□□□□ -1.06
ATRX-209ENST00000623242 BARGINQ6ZT62 677 aa8.45□□□□□ -1.06
ATRX-209ENST00000623242 HS3ST6Q96QI5 342 aa8.44□□□□□ -1.06
ATRX-209ENST00000623242 SLC24A3Q9HC58 644 aa8.44□□□□□ -1.06
ATRX-209ENST00000623242 KHSRPQ92945 711 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATRX-209ENST00000623242 ERBB3P21860 1342 aa8.43□□□□□ -1.06
ATRX-209ENST00000623242 GPR153Q6NV75 609 aa8.41□□□□□ -1.06
ATRX-209ENST00000623242 POTEB3A0JP26 581 aa8.4□□□□□ -1.06
ATRX-209ENST00000623242 NUTM2FA1L443 756 aa8.4□□□□□ -1.06
ATRX-209ENST00000623242 ARSIQ5FYB1 569 aa8.4□□□□□ -1.06
ATRX-209ENST00000623242 POTEBQ6S5H4 581 aa8.4□□□□□ -1.06
ATRX-209ENST00000623242 PCDHGA10Q9Y5H3 936 aa8.4□□□□□ -1.06
ATRX-209ENST00000623242 ZNF316A6NFI3 1004 aaPredicted RBP8.38□□□□□ -1.07
ATRX-209ENST00000623242 PHF14O94880 888 aa8.38□□□□□ -1.07
ATRX-209ENST00000623242 NUDT7P0C024 238 aa8.38□□□□□ -1.07
ATRX-209ENST00000623242 BRPF1P55201 1214 aaPredicted RBP8.37□□□□□ -1.07
ATRX-209ENST00000623242 VARS2Q5ST30 1063 aaKnown RBP8.37□□□□□ -1.07
ATRX-209ENST00000623242 CDHR5Q9HBB8 845 aa8.37□□□□□ -1.07
ATRX-209ENST00000623242 FECHP22830 423 aa8.36□□□□□ -1.07
ATRX-209ENST00000623242 FOSBP53539 338 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms