RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 LRRC9Q6ZRR7 1453 aa29.48■■■□□ 2.31
PCSK6-220ENST00000622483 TIAM1Q13009 1591 aa29.46■■■□□ 2.31
PCSK6-220ENST00000622483 CASKIN1Q8WXD9 1431 aa29.45■■■□□ 2.3
PCSK6-220ENST00000622483 CHIC2Q9UKJ5 165 aa29.43■■■□□ 2.3
PCSK6-220ENST00000622483 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
PCSK6-220ENST00000622483 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
PCSK6-220ENST00000622483 KIAA0586Q9BVV6 1533 aa29.43■■■□□ 2.3
PCSK6-220ENST00000622483 CDK13Q14004 1512 aaKnown RBP29.42■■■□□ 2.3
PCSK6-220ENST00000622483 EFCAB5A4FU69 1503 aa29.41■■■□□ 2.3
PCSK6-220ENST00000622483 C11orf95C9JLR9 678 aaPredicted RBP29.4■■■□□ 2.3
PCSK6-220ENST00000622483 BRPF3Q9ULD4 1205 aa29.4■■■□□ 2.3
PCSK6-220ENST00000622483 POLR3GLQ9BT43 218 aa29.38■■■□□ 2.29
PCSK6-220ENST00000622483 PRKRIP1Q9H875 184 aaPredicted RBP29.38■■■□□ 2.29
PCSK6-220ENST00000622483 PLB1Q6P1J6 1458 aa29.36■■■□□ 2.29
PCSK6-220ENST00000622483 DISP1Q96F81 1524 aa29.36■■■□□ 2.29
PCSK6-220ENST00000622483 ZBED9Q6R2W3 1325 aa29.35■■■□□ 2.29
PCSK6-220ENST00000622483 FYCO1Q9BQS8 1478 aa29.34■■■□□ 2.29
PCSK6-220ENST00000622483 ZNF777Q9ULD5 760 aaPredicted RBP29.34■■■□□ 2.29
PCSK6-220ENST00000622483 SAMD9Q5K651 1589 aa29.33■■■□□ 2.29
PCSK6-220ENST00000622483 EIF4G2P78344 907 aaKnown RBP eCLIP29.27■■■□□ 2.28
PCSK6-220ENST00000622483 PRG4Q92954 1404 aaPredicted RBP29.27■■■□□ 2.28
PCSK6-220ENST00000622483 ZNF644Q9H582 1327 aaPredicted RBP29.26■■■□□ 2.28
PCSK6-220ENST00000622483 RRP7BPQ9NSQ0 103 aa29.24■■■□□ 2.27
PCSK6-220ENST00000622483 MAGI3Q5TCQ9 1506 aa29.22■■■□□ 2.27
PCSK6-220ENST00000622483 FOXD1Q16676 465 aa29.22■■■□□ 2.27
PCSK6-220ENST00000622483 SKAP1Q86WV1 359 aa29.22■■■□□ 2.27
PCSK6-220ENST00000622483 NUP160Q12769 1436 aa29.21■■■□□ 2.27
PCSK6-220ENST00000622483 UBE2Q2Q8WVN8 375 aa29.2■■■□□ 2.27
PCSK6-220ENST00000622483 LRRIQ1Q96JM4 1722 aa29.2■■■□□ 2.26
PCSK6-220ENST00000622483 EPRSP07814 1512 aaKnown RBP29.19■■■□□ 2.26
PCSK6-220ENST00000622483 UGGT2Q9NYU1 1516 aa29.19■■■□□ 2.26
PCSK6-220ENST00000622483 KIAA0556O60303 1618 aa29.18■■■□□ 2.26
PCSK6-220ENST00000622483 CARMIL2Q6F5E8 1435 aa29.18■■■□□ 2.26
PCSK6-220ENST00000622483 SLC4A3P48751 1232 aa29.17■■■□□ 2.26
PCSK6-220ENST00000622483 NCOA2Q15596 1464 aa29.17■■■□□ 2.26
PCSK6-220ENST00000622483 CCDC18Q5T9S5 1454 aa29.16■■■□□ 2.26
PCSK6-220ENST00000622483 CNTLNQ9NXG0 1405 aa29.16■■■□□ 2.26
PCSK6-220ENST00000622483 NUDCQ9Y266 331 aa29.14■■■□□ 2.25
PCSK6-220ENST00000622483 NUP153P49790 1475 aaKnown RBP29.12■■■□□ 2.25
PCSK6-220ENST00000622483 PTPRGP23470 1445 aa29.12■■■□□ 2.25
PCSK6-220ENST00000622483 CHD1O14646 1710 aa29.12■■■□□ 2.25
PCSK6-220ENST00000622483 ERCC6L2Q5T890 1561 aa29.11■■■□□ 2.25
PCSK6-220ENST00000622483 PDE4AP27815 886 aa29.09■■■□□ 2.25
PCSK6-220ENST00000622483 EXOC6Q8TAG9 804 aa29.08■■■□□ 2.25
PCSK6-220ENST00000622483 PTPRKQ15262 1439 aa29.08■■■□□ 2.25
PCSK6-220ENST00000622483 FGD6Q6ZV73 1430 aa29.07■■■□□ 2.24
PCSK6-220ENST00000622483 L3MBTL2Q969R5 705 aa29.07■■■□□ 2.24
PCSK6-220ENST00000622483 CFAP43Q8NDM7 1665 aa29.07■■■□□ 2.24
PCSK6-220ENST00000622483 PLEKHD1A6NEE1 506 aa29.05■■■□□ 2.24
PCSK6-220ENST00000622483 CCDC7Q96M83 1385 aa29.05■■■□□ 2.24
PCSK6-220ENST00000622483 MAP3K1Q13233 1512 aa29.03■■■□□ 2.24
PCSK6-220ENST00000622483 UACAQ9BZF9 1416 aa29.02■■■□□ 2.24
PCSK6-220ENST00000622483 CFDP1Q9UEE9 299 aaPredicted RBP29■■■□□ 2.23
PCSK6-220ENST00000622483 GSE1Q14687 1217 aa28.99■■■□□ 2.23
PCSK6-220ENST00000622483 FRAT1Q92837 279 aaPredicted RBP28.99■■■□□ 2.23
PCSK6-220ENST00000622483 HECW1Q76N89 1606 aa28.99■■■□□ 2.23
PCSK6-220ENST00000622483 KIF7Q2M1P5 1343 aa28.99■■■□□ 2.23
PCSK6-220ENST00000622483 SMG6Q86US8 1419 aaKnown RBP28.99■■■□□ 2.23
PCSK6-220ENST00000622483 WASHC2CQ9Y4E1 1318 aa28.98■■■□□ 2.23
PCSK6-220ENST00000622483 KDM5BQ9UGL1 1544 aa28.98■■■□□ 2.23
PCSK6-220ENST00000622483 MYOM3Q5VTT5 1437 aa28.97■■■□□ 2.23
PCSK6-220ENST00000622483 ZNF326Q5BKZ1 582 aaKnown RBP28.96■■■□□ 2.23
PCSK6-220ENST00000622483 NBPF8Q3BBV2 869 aa28.95■■■□□ 2.22
PCSK6-220ENST00000622483 USP35Q9P2H5 1018 aa28.94■■■□□ 2.22
PCSK6-220ENST00000622483 PPM1GO15355 546 aaPredicted RBP28.93■■■□□ 2.22
PCSK6-220ENST00000622483 RAPGEF6Q8TEU7 1601 aa28.93■■■□□ 2.22
PCSK6-220ENST00000622483 NFKBIBQ15653 356 aa28.92■■■□□ 2.22
PCSK6-220ENST00000622483 BACH2Q9BYV9 841 aa28.92■■■□□ 2.22
PCSK6-220ENST00000622483 ATP10BO94823 1461 aa28.88■■■□□ 2.21
PCSK6-220ENST00000622483 EHBP1L1Q8N3D4 1523 aa28.88■■■□□ 2.21
PCSK6-220ENST00000622483 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
PCSK6-220ENST00000622483 RNF123Q5XPI4 1314 aa28.87■■■□□ 2.21
PCSK6-220ENST00000622483 PLIN1O60240 522 aa28.87■■■□□ 2.21
PCSK6-220ENST00000622483 NAIPQ13075 1403 aa28.87■■■□□ 2.21
PCSK6-220ENST00000622483 TMC1Q8TDI8 760 aa28.87■■■□□ 2.21
PCSK6-220ENST00000622483 TCERG1O14776 1098 aaKnown RBP28.86■■■□□ 2.21
PCSK6-220ENST00000622483 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
PCSK6-220ENST00000622483 HFM1A2PYH4 1435 aa28.85■■■□□ 2.21
PCSK6-220ENST00000622483 HNRNPMP52272 730 aaKnown RBP eCLIP28.85■■■□□ 2.211e-6■■■□□ 18.4
PCSK6-220ENST00000622483 SUPT6HQ7KZ85 1726 aaKnown RBP28.84■■■□□ 2.21
PCSK6-220ENST00000622483 RRP1P56182 461 aaKnown RBP28.82■■■□□ 2.2
PCSK6-220ENST00000622483 DAXXQ9UER7 740 aaPredicted RBP28.8■■■□□ 2.2
PCSK6-220ENST00000622483 PTPN23Q9H3S7 1636 aa28.8■■■□□ 2.2
PCSK6-220ENST00000622483 MPHOSPH9Q99550 1183 aa28.78■■■□□ 2.2
PCSK6-220ENST00000622483 TROQ12816 1431 aaPredicted RBP28.78■■■□□ 2.2
PCSK6-220ENST00000622483 ARHGEF11O15085 1522 aa28.78■■■□□ 2.2
PCSK6-220ENST00000622483 KIF14Q15058 1648 aa28.77■■■□□ 2.2
PCSK6-220ENST00000622483 ARXQ96QS3 562 aa28.77■■■□□ 2.2
PCSK6-220ENST00000622483 FRAT2O75474 233 aaPredicted RBP28.75■■■□□ 2.19
PCSK6-220ENST00000622483 DCAF11Q8TEB1 546 aa28.74■■■□□ 2.19
PCSK6-220ENST00000622483 RCAN3Q9UKA8 241 aa28.74■■■□□ 2.19
PCSK6-220ENST00000622483 PNISRQ8TF01 805 aaKnown RBP28.73■■■□□ 2.19
PCSK6-220ENST00000622483 CDCA7LQ96GN5 454 aa28.69■■■□□ 2.18
PCSK6-220ENST00000622483 CYB5RLQ6IPT4 315 aa28.68■■■□□ 2.18
PCSK6-220ENST00000622483 ABCA8O94911 1581 aa28.66■■■□□ 2.18
PCSK6-220ENST00000622483 DENND4BO75064 1496 aaPredicted RBP28.66■■■□□ 2.18
PCSK6-220ENST00000622483 GPATCH8Q9UKJ3 1502 aaKnown RBP28.64■■■□□ 2.18
PCSK6-220ENST00000622483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.64■■■□□ 2.18
PCSK6-220ENST00000622483 DDRGK1Q96HY6 314 aa28.63■■■□□ 2.17
PCSK6-220ENST00000622483 DHX29Q7Z478 1369 aaKnown RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms