RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 CAMSAP2Q08AD1 1489 aa28.05■■■□□ 2.08
SEMA6C-210ENST00000621728 MYO5CQ9NQX4 1742 aa28.05■■■□□ 2.08
SEMA6C-210ENST00000621728 PTPRKQ15262 1439 aa28.05■■■□□ 2.08
SEMA6C-210ENST00000621728 ARHGAP5Q13017 1502 aa27.99■■■□□ 2.07
SEMA6C-210ENST00000621728 ABCA9Q8IUA7 1624 aa27.98■■■□□ 2.07
SEMA6C-210ENST00000621728 SAMD9LQ8IVG5 1584 aa27.97■■■□□ 2.07
SEMA6C-210ENST00000621728 MAPKBP1O60336 1514 aa27.97■■■□□ 2.07
SEMA6C-210ENST00000621728 DNMT1P26358 1616 aaKnown RBP27.95■■■□□ 2.06
SEMA6C-210ENST00000621728 PLCH2O75038 1416 aa27.94■■■□□ 2.06
SEMA6C-210ENST00000621728 DAPK1P53355 1430 aa27.92■■■□□ 2.06
SEMA6C-210ENST00000621728 ABCC5O15440 1437 aa27.92■■■□□ 2.06
SEMA6C-210ENST00000621728 CHIC2Q9UKJ5 165 aa27.92■■■□□ 2.06
SEMA6C-210ENST00000621728 HNRNPMP52272 730 aaKnown RBP eCLIP27.87■■■□□ 2.05
SEMA6C-210ENST00000621728 CROCC2H7BZ55 1655 aa27.86■■■□□ 2.05
SEMA6C-210ENST00000621728 SYCP2Q9BX26 1530 aa27.85■■■□□ 2.05
SEMA6C-210ENST00000621728 MBD5Q9P267 1494 aa27.83■■■□□ 2.05
SEMA6C-210ENST00000621728 SETD5Q9C0A6 1442 aa27.83■■■□□ 2.05
SEMA6C-210ENST00000621728 ARAP3Q8WWN8 1544 aa27.83■■■□□ 2.05
SEMA6C-210ENST00000621728 EFCAB2Q5VUJ9 269 aa27.82■■■□□ 2.04
SEMA6C-210ENST00000621728 RAB3GAP2Q9H2M9 1393 aa27.82■■■□□ 2.04
SEMA6C-210ENST00000621728 RRP7BPQ9NSQ0 103 aa27.81■■■□□ 2.04
SEMA6C-210ENST00000621728 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
SEMA6C-210ENST00000621728 ARHGEF5Q12774 1597 aa27.8■■■□□ 2.04
SEMA6C-210ENST00000621728 CD109Q6YHK3 1445 aa27.79■■■□□ 2.04
SEMA6C-210ENST00000621728 FANCAO15360 1455 aa27.79■■■□□ 2.04
SEMA6C-210ENST00000621728 ABCC1P33527 1531 aa27.78■■■□□ 2.04
SEMA6C-210ENST00000621728 HFM1A2PYH4 1435 aa27.78■■■□□ 2.04
SEMA6C-210ENST00000621728 DIP2BQ9P265 1576 aa27.78■■■□□ 2.04
SEMA6C-210ENST00000621728 NAIPQ13075 1403 aa27.78■■■□□ 2.04
SEMA6C-210ENST00000621728 AKNAQ7Z591 1439 aa27.78■■■□□ 2.04
SEMA6C-210ENST00000621728 ADGBQ8N7X0 1667 aa27.75■■■□□ 2.03
SEMA6C-210ENST00000621728 CCER1Q8TC90 406 aaPredicted RBP27.75■■■□□ 2.03
SEMA6C-210ENST00000621728 DNAJC5Q9H3Z4 198 aa27.75■■■□□ 2.03
SEMA6C-210ENST00000621728 CCDC141Q6ZP82 1450 aa27.74■■■□□ 2.03
SEMA6C-210ENST00000621728 PLEKHH2Q8IVE3 1493 aa27.74■■■□□ 2.03
SEMA6C-210ENST00000621728 GCC2Q8IWJ2 1684 aa27.74■■■□□ 2.03
SEMA6C-210ENST00000621728 MAP3K4Q9Y6R4 1608 aa27.74■■■□□ 2.03
SEMA6C-210ENST00000621728 KIAA1107Q9UPP5 1409 aa27.73■■■□□ 2.03
SEMA6C-210ENST00000621728 GLI2P10070 1586 aa27.73■■■□□ 2.03
SEMA6C-210ENST00000621728 KDM6BO15054 1643 aa27.72■■■□□ 2.03
SEMA6C-210ENST00000621728 C9orf84Q5VXU9 1444 aa27.72■■■□□ 2.03
SEMA6C-210ENST00000621728 FAM69CQ0P6D2 419 aa27.71■■■□□ 2.03
SEMA6C-210ENST00000621728 ROCK1Q13464 1354 aa27.71■■■□□ 2.03
SEMA6C-210ENST00000621728 SHANK2Q9UPX8 1470 aa27.7■■■□□ 2.03
SEMA6C-210ENST00000621728 TRAPPC8Q9Y2L5 1435 aa27.7■■■□□ 2.02
SEMA6C-210ENST00000621728 ADGRL2O95490 1459 aa27.68■■■□□ 2.02
SEMA6C-210ENST00000621728 ADGRL1O94910 1474 aa27.67■■■□□ 2.02
SEMA6C-210ENST00000621728 NCOA1Q15788 1441 aa27.67■■■□□ 2.02
SEMA6C-210ENST00000621728 TSPY4P0CV99 314 aa27.67■■■□□ 2.02
SEMA6C-210ENST00000621728 TSPY10P0CW01 314 aa27.67■■■□□ 2.02
SEMA6C-210ENST00000621728 KIF13AQ9H1H9 1805 aa27.66■■■□□ 2.02
SEMA6C-210ENST00000621728 TSPOAP1O95153 1857 aa27.64■■■□□ 2.02
SEMA6C-210ENST00000621728 SCAPERQ9BY12 1400 aa27.64■■■□□ 2.02
SEMA6C-210ENST00000621728 CFAP74Q9C0B2 1584 aa27.63■■■□□ 2.01
SEMA6C-210ENST00000621728 RSPH4AQ5TD94 716 aa27.63■■■□□ 2.01
SEMA6C-210ENST00000621728 DHX57Q6P158 1386 aaKnown RBP27.63■■■□□ 2.01
SEMA6C-210ENST00000621728 ANKRD30AQ9BXX3 1397 aa27.63■■■□□ 2.01
SEMA6C-210ENST00000621728 MAST1Q9Y2H9 1570 aa27.62■■■□□ 2.01
SEMA6C-210ENST00000621728 AFAP1Q8N556 730 aa27.61■■■□□ 2.01
SEMA6C-210ENST00000621728 PPRC1Q5VV67 1664 aaKnown RBP27.59■■■□□ 2.01
SEMA6C-210ENST00000621728 NEO1Q92859 1461 aa27.56■■■□□ 2
SEMA6C-210ENST00000621728 KIF15Q9NS87 1388 aa27.55■■■□□ 2
SEMA6C-210ENST00000621728 PLXNC1O60486 1568 aa27.52■■■□□ 2
SEMA6C-210ENST00000621728 ZFYVE16Q7Z3T8 1539 aa27.52■■■□□ 2
SEMA6C-210ENST00000621728 SPAG9O60271 1321 aaKnown RBP27.51■■■□□ 2
SEMA6C-210ENST00000621728 ANKRD50Q9ULJ7 1429 aa27.5■■□□□ 1.99
SEMA6C-210ENST00000621728 INO80Q9ULG1 1556 aaPredicted RBP27.49■■□□□ 1.99
SEMA6C-210ENST00000621728 POGZQ7Z3K3 1410 aa27.49■■□□□ 1.99
SEMA6C-210ENST00000621728 ZNF518AQ6AHZ1 1483 aa27.47■■□□□ 1.99
SEMA6C-210ENST00000621728 ATP7AQ04656 1500 aa27.47■■□□□ 1.99
SEMA6C-210ENST00000621728 TRIM52Q96A61 297 aa27.46■■□□□ 1.99
SEMA6C-210ENST00000621728 ZEB1P37275 1124 aaPredicted RBP27.45■■□□□ 1.99
SEMA6C-210ENST00000621728 RAPGEF3O95398 923 aa27.45■■□□□ 1.98
SEMA6C-210ENST00000621728 RTEL1-TNFRSF6BF6WH68 1400 aa27.44■■□□□ 1.98
SEMA6C-210ENST00000621728 KDM5CP41229 1560 aa27.44■■□□□ 1.98
SEMA6C-210ENST00000621728 DENND4BO75064 1496 aaPredicted RBP27.44■■□□□ 1.98
SEMA6C-210ENST00000621728 KIDINS220Q9ULH0 1771 aa27.43■■□□□ 1.98
SEMA6C-210ENST00000621728 RICTORQ6R327 1708 aa27.42■■□□□ 1.98
SEMA6C-210ENST00000621728 MYT1LQ9UL68 1186 aa27.42■■□□□ 1.98
SEMA6C-210ENST00000621728 TEX14Q8IWB6 1497 aa27.42■■□□□ 1.98
SEMA6C-210ENST00000621728 DUOX2Q9NRD8 1548 aa27.4■■□□□ 1.98
SEMA6C-210ENST00000621728 FRMPD1Q5SYB0 1578 aa27.39■■□□□ 1.97
SEMA6C-210ENST00000621728 HECW2Q9P2P5 1572 aa27.37■■□□□ 1.97
SEMA6C-210ENST00000621728 MLH3Q9UHC1 1453 aa27.33■■□□□ 1.97
SEMA6C-210ENST00000621728 TRHP20396 242 aaPredicted RBP27.33■■□□□ 1.97
SEMA6C-210ENST00000621728 PZPP20742 1482 aa27.33■■□□□ 1.97
SEMA6C-210ENST00000621728 MPHOSPH9Q99550 1183 aa27.31■■□□□ 1.96
SEMA6C-210ENST00000621728 ABCA6Q8N139 1617 aa27.31■■□□□ 1.96
SEMA6C-210ENST00000621728 ERBINQ96RT1 1412 aa27.31■■□□□ 1.96
SEMA6C-210ENST00000621728 CLSPNQ9HAW4 1339 aa27.31■■□□□ 1.96
SEMA6C-210ENST00000621728 COL17A1Q9UMD9 1497 aaPredicted RBP27.3■■□□□ 1.96
SEMA6C-210ENST00000621728 UNC13BO14795 1591 aa27.28■■□□□ 1.96
SEMA6C-210ENST00000621728 NUP155O75694 1391 aa27.28■■□□□ 1.96
SEMA6C-210ENST00000621728 FOXD1Q16676 465 aa27.28■■□□□ 1.96
SEMA6C-210ENST00000621728 SLC4A1APQ9BWU0 796 aaKnown RBP27.26■■□□□ 1.95
SEMA6C-210ENST00000621728 SIN3AQ96ST3 1273 aa27.25■■□□□ 1.95
SEMA6C-210ENST00000621728 YEATS2Q9ULM3 1422 aa27.25■■□□□ 1.95
SEMA6C-210ENST00000621728 KDM5DQ9BY66 1539 aa27.24■■□□□ 1.95
SEMA6C-210ENST00000621728 DHX29Q7Z478 1369 aaKnown RBP27.24■■□□□ 1.95
SEMA6C-210ENST00000621728 DIP2CQ9Y2E4 1556 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms