RNA–Protein interactions for RNA: ENST00000621640.1

GTF2I-220, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-220ENST00000621640 SCAPERQ9BY12 1400 aa25.37■■□□□ 1.65
GTF2I-220ENST00000621640 RIMS1Q86UR5 1692 aaKnown RBP25.36■■□□□ 1.65
GTF2I-220ENST00000621640 MYO5CQ9NQX4 1742 aa25.35■■□□□ 1.65
GTF2I-220ENST00000621640 PCF11O94913 1555 aaKnown RBP25.34■■□□□ 1.65
GTF2I-220ENST00000621640 LRRIQ1Q96JM4 1722 aa25.34■■□□□ 1.65
GTF2I-220ENST00000621640 LMTK3Q96Q04 1460 aa25.34■■□□□ 1.65
GTF2I-220ENST00000621640 TROQ12816 1431 aaPredicted RBP25.33■■□□□ 1.65
GTF2I-220ENST00000621640 CDK11AQ9UQ88 783 aaPredicted RBP25.31■■□□□ 1.64
GTF2I-220ENST00000621640 EFCAB2Q5VUJ9 269 aa25.29■■□□□ 1.64
GTF2I-220ENST00000621640 CLIP1P30622 1438 aa25.26■■□□□ 1.63
GTF2I-220ENST00000621640 ARHGAP5Q13017 1502 aa25.24■■□□□ 1.63
GTF2I-220ENST00000621640 ATP10AO60312 1499 aa25.24■■□□□ 1.63
GTF2I-220ENST00000621640 ZNF518AQ6AHZ1 1483 aa25.22■■□□□ 1.63
GTF2I-220ENST00000621640 C9orf84Q5VXU9 1444 aa25.22■■□□□ 1.63
GTF2I-220ENST00000621640 KDM5CP41229 1560 aa25.22■■□□□ 1.63
GTF2I-220ENST00000621640 CASKIN1Q8WXD9 1431 aa25.21■■□□□ 1.63
GTF2I-220ENST00000621640 ARHGEF12Q9NZN5 1544 aa25.21■■□□□ 1.63
GTF2I-220ENST00000621640 FER1L4A9Z1Z3 1794 aa25.21■■□□□ 1.63
GTF2I-220ENST00000621640 MLECQ14165 292 aa25.2■■□□□ 1.62
GTF2I-220ENST00000621640 CCDC18Q5T9S5 1454 aa25.19■■□□□ 1.62
GTF2I-220ENST00000621640 CDC42BPBQ9Y5S2 1711 aa25.17■■□□□ 1.62
GTF2I-220ENST00000621640 PLPPR3Q6T4P5 718 aa25.17■■□□□ 1.62
GTF2I-220ENST00000621640 PREX2Q70Z35 1606 aa25.16■■□□□ 1.62
GTF2I-220ENST00000621640 AFAP1Q8N556 730 aa25.16■■□□□ 1.62
GTF2I-220ENST00000621640 HSPA2P54652 639 aa25.14■■□□□ 1.62
GTF2I-220ENST00000621640 FYCO1Q9BQS8 1478 aa25.13■■□□□ 1.61
GTF2I-220ENST00000621640 DIP2CQ9Y2E4 1556 aa25.13■■□□□ 1.61
GTF2I-220ENST00000621640 ABCC1P33527 1531 aa25.12■■□□□ 1.61
GTF2I-220ENST00000621640 FBXO41Q8TF61 875 aa25.11■■□□□ 1.61
GTF2I-220ENST00000621640 REREQ9P2R6 1566 aa25.1■■□□□ 1.61
GTF2I-220ENST00000621640 MLH3Q9UHC1 1453 aa25.09■■□□□ 1.61
GTF2I-220ENST00000621640 ABCA6Q8N139 1617 aa25.09■■□□□ 1.61
GTF2I-220ENST00000621640 TRAPPC8Q9Y2L5 1435 aa25.09■■□□□ 1.61
GTF2I-220ENST00000621640 ITSN2Q9NZM3 1697 aa25.07■■□□□ 1.6
GTF2I-220ENST00000621640 CDC42BPAQ5VT25 1732 aa25.06■■□□□ 1.6
GTF2I-220ENST00000621640 PREX1Q8TCU6 1659 aa25.02■■□□□ 1.6
GTF2I-220ENST00000621640 CEBPAP49715 358 aaPredicted RBP25.02■■□□□ 1.6
GTF2I-220ENST00000621640 MYT1LQ9UL68 1186 aa25.02■■□□□ 1.6
GTF2I-220ENST00000621640 AGLP35573 1532 aa25■■□□□ 1.59
GTF2I-220ENST00000621640 KIDINS220Q9ULH0 1771 aa24.99■■□□□ 1.59
GTF2I-220ENST00000621640 SAMD9LQ8IVG5 1584 aa24.98■■□□□ 1.59
GTF2I-220ENST00000621640 GPATCH8Q9UKJ3 1502 aaKnown RBP24.97■■□□□ 1.59
GTF2I-220ENST00000621640 SYCP2Q9BX26 1530 aa24.94■■□□□ 1.58
GTF2I-220ENST00000621640 C3P01024 1663 aa24.92■■□□□ 1.58
GTF2I-220ENST00000621640 ZNF777Q9ULD5 760 aaPredicted RBP24.91■■□□□ 1.58
GTF2I-220ENST00000621640 UHRF1BP1Q6BDS2 1440 aa24.91■■□□□ 1.58
GTF2I-220ENST00000621640 STRCQ7RTU9 1775 aa24.87■■□□□ 1.57
GTF2I-220ENST00000621640 KIAA1107Q9UPP5 1409 aa24.86■■□□□ 1.57
GTF2I-220ENST00000621640 HNRNPMP52272 730 aaKnown RBP eCLIP24.86■■□□□ 1.57
GTF2I-220ENST00000621640 SETD1BQ9UPS6 1966 aaKnown RBP24.85■■□□□ 1.57
GTF2I-220ENST00000621640 SPAG9O60271 1321 aaKnown RBP24.85■■□□□ 1.57
GTF2I-220ENST00000621640 INO80Q9ULG1 1556 aaPredicted RBP24.84■■□□□ 1.57
GTF2I-220ENST00000621640 PLEKHH2Q8IVE3 1493 aa24.84■■□□□ 1.57
GTF2I-220ENST00000621640 MTUS2Q5JR59 1369 aa24.84■■□□□ 1.57
GTF2I-220ENST00000621640 CCNB3Q8WWL7 1395 aa24.84■■□□□ 1.57
GTF2I-220ENST00000621640 CERKQ8TCT0 537 aa24.84■■□□□ 1.57
GTF2I-220ENST00000621640 ATP7AQ04656 1500 aa24.84■■□□□ 1.57
GTF2I-220ENST00000621640 CNTLNQ9NXG0 1405 aa24.84■■□□□ 1.57
GTF2I-220ENST00000621640 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
GTF2I-220ENST00000621640 PLXNC1O60486 1568 aa24.81■■□□□ 1.56
GTF2I-220ENST00000621640 ESF1Q9H501 851 aaKnown RBP24.81■■□□□ 1.56
GTF2I-220ENST00000621640 TIAM1Q13009 1591 aa24.8■■□□□ 1.56
GTF2I-220ENST00000621640 EHBP1L1Q8N3D4 1523 aa24.79■■□□□ 1.56
GTF2I-220ENST00000621640 MROH2AA6NES4 1674 aa24.78■■□□□ 1.56
GTF2I-220ENST00000621640 SUPT6HQ7KZ85 1726 aaKnown RBP24.78■■□□□ 1.56
GTF2I-220ENST00000621640 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
GTF2I-220ENST00000621640 DMRT2Q9Y5R5 561 aa24.76■■□□□ 1.55
GTF2I-220ENST00000621640 A2MP01023 1474 aa24.76■■□□□ 1.55
GTF2I-220ENST00000621640 ZNF644Q9H582 1327 aaPredicted RBP24.74■■□□□ 1.55
GTF2I-220ENST00000621640 NPATQ14207 1427 aa24.74■■□□□ 1.55
GTF2I-220ENST00000621640 MBD5Q9P267 1494 aa24.73■■□□□ 1.55
GTF2I-220ENST00000621640 PTPRTO14522 1441 aa24.72■■□□□ 1.55
GTF2I-220ENST00000621640 ZMYM3Q14202 1370 aa24.72■■□□□ 1.55
GTF2I-220ENST00000621640 NCOA1Q15788 1441 aa24.7■■□□□ 1.55
GTF2I-220ENST00000621640 CLTCQ00610 1675 aaKnown RBP24.7■■□□□ 1.54
GTF2I-220ENST00000621640 ADGBQ8N7X0 1667 aa24.69■■□□□ 1.54
GTF2I-220ENST00000621640 RTEL1-TNFRSF6BF6WH68 1400 aa24.64■■□□□ 1.54
GTF2I-220ENST00000621640 CAMSAP1Q5T5Y3 1602 aa24.64■■□□□ 1.53
GTF2I-220ENST00000621640 NCOA2Q15596 1464 aa24.64■■□□□ 1.53
GTF2I-220ENST00000621640 PTPRKQ15262 1439 aa24.63■■□□□ 1.53
GTF2I-220ENST00000621640 GGT6Q6P531 493 aa24.63■■□□□ 1.53
GTF2I-220ENST00000621640 MYO3AQ8NEV4 1616 aa24.63■■□□□ 1.53
GTF2I-220ENST00000621640 ZNF142P52746 1687 aaPredicted RBP24.62■■□□□ 1.53
GTF2I-220ENST00000621640 LTBP4Q8N2S1 1624 aa24.61■■□□□ 1.53
GTF2I-220ENST00000621640 CAMSAP2Q08AD1 1489 aa24.6■■□□□ 1.53
GTF2I-220ENST00000621640 CCDC141Q6ZP82 1450 aa24.58■■□□□ 1.53
GTF2I-220ENST00000621640 PPP6R1Q9UPN7 881 aa24.58■■□□□ 1.53
GTF2I-220ENST00000621640 CEP170BQ9Y4F5 1589 aaPredicted RBP24.58■■□□□ 1.52
GTF2I-220ENST00000621640 DHX29Q7Z478 1369 aaKnown RBP24.57■■□□□ 1.52
GTF2I-220ENST00000621640 PLA2R1Q13018 1463 aa24.54■■□□□ 1.52
GTF2I-220ENST00000621640 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
GTF2I-220ENST00000621640 TCOF1Q13428 1488 aaKnown RBP24.52■■□□□ 1.52
GTF2I-220ENST00000621640 VPS8Q8N3P4 1428 aa24.52■■□□□ 1.52
GTF2I-220ENST00000621640 ARHGEF5Q12774 1597 aa24.5■■□□□ 1.51
GTF2I-220ENST00000621640 IQSEC2Q5JU85 1478 aa24.5■■□□□ 1.51
GTF2I-220ENST00000621640 LRRC9Q6ZRR7 1453 aa24.5■■□□□ 1.51
GTF2I-220ENST00000621640 KIF3BO15066 747 aa24.48■■□□□ 1.51
GTF2I-220ENST00000621640 RSPH4AQ5TD94 716 aa24.48■■□□□ 1.51
GTF2I-220ENST00000621640 KDM5DQ9BY66 1539 aa24.48■■□□□ 1.51
GTF2I-220ENST00000621640 FAM135AQ9P2D6 1515 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms