RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 CFAP74Q9C0B2 1584 aa17.01■□□□□ 0.31
POLR2J3-221ENST00000621093 ARAP3Q8WWN8 1544 aa17.01■□□□□ 0.31
POLR2J3-221ENST00000621093 FANCAO15360 1455 aa17■□□□□ 0.31
POLR2J3-221ENST00000621093 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
POLR2J3-221ENST00000621093 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
POLR2J3-221ENST00000621093 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.31
POLR2J3-221ENST00000621093 NEO1Q92859 1461 aa16.96■□□□□ 0.31
POLR2J3-221ENST00000621093 AKNAQ7Z591 1439 aa16.96■□□□□ 0.3
POLR2J3-221ENST00000621093 EFCAB2Q5VUJ9 269 aa16.95■□□□□ 0.3
POLR2J3-221ENST00000621093 CFDP1Q9UEE9 299 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-221ENST00000621093 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
POLR2J3-221ENST00000621093 KDM6BO15054 1643 aa16.95■□□□□ 0.3
POLR2J3-221ENST00000621093 COL17A1Q9UMD9 1497 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-221ENST00000621093 ZNF644Q9H582 1327 aaPredicted RBP16.94■□□□□ 0.3
POLR2J3-221ENST00000621093 ABCC1P33527 1531 aa16.93■□□□□ 0.3
POLR2J3-221ENST00000621093 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
POLR2J3-221ENST00000621093 ARHGEF12Q9NZN5 1544 aa16.92■□□□□ 0.3
POLR2J3-221ENST00000621093 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
POLR2J3-221ENST00000621093 ADGRL1O94910 1474 aa16.92■□□□□ 0.3
POLR2J3-221ENST00000621093 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
POLR2J3-221ENST00000621093 SYCP2Q9BX26 1530 aa16.91■□□□□ 0.3
POLR2J3-221ENST00000621093 FRMPD1Q5SYB0 1578 aa16.9■□□□□ 0.3
POLR2J3-221ENST00000621093 FGD6Q6ZV73 1430 aa16.9■□□□□ 0.3
POLR2J3-221ENST00000621093 SCAPERQ9BY12 1400 aa16.89■□□□□ 0.29
POLR2J3-221ENST00000621093 MIA2Q96PC5 1412 aa16.88■□□□□ 0.29
POLR2J3-221ENST00000621093 HNRNPMP52272 730 aaKnown RBP eCLIP16.87■□□□□ 0.29
POLR2J3-221ENST00000621093 RAPGEF3O95398 923 aa16.86■□□□□ 0.29
POLR2J3-221ENST00000621093 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
POLR2J3-221ENST00000621093 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-221ENST00000621093 TCOF1Q13428 1488 aaKnown RBP16.85■□□□□ 0.29
POLR2J3-221ENST00000621093 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
POLR2J3-221ENST00000621093 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
POLR2J3-221ENST00000621093 MBD5Q9P267 1494 aa16.84■□□□□ 0.29
POLR2J3-221ENST00000621093 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
POLR2J3-221ENST00000621093 CROCC2H7BZ55 1655 aa16.81■□□□□ 0.28
POLR2J3-221ENST00000621093 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
POLR2J3-221ENST00000621093 AFAP1Q8N556 730 aa16.81■□□□□ 0.28
POLR2J3-221ENST00000621093 KDM5CP41229 1560 aa16.81■□□□□ 0.28
POLR2J3-221ENST00000621093 FAM50AQ14320 339 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-221ENST00000621093 DNMT1P26358 1616 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-221ENST00000621093 RRBP1Q9P2E9 1410 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-221ENST00000621093 ZMYM4Q5VZL5 1548 aa16.79■□□□□ 0.28
POLR2J3-221ENST00000621093 KIDINS220Q9ULH0 1771 aa16.79■□□□□ 0.28
POLR2J3-221ENST00000621093 ZNF518AQ6AHZ1 1483 aa16.79■□□□□ 0.28
POLR2J3-221ENST00000621093 HECW2Q9P2P5 1572 aa16.78■□□□□ 0.28
POLR2J3-221ENST00000621093 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
POLR2J3-221ENST00000621093 INO80Q9ULG1 1556 aaPredicted RBP16.77■□□□□ 0.27
POLR2J3-221ENST00000621093 ABCC5O15440 1437 aa16.76■□□□□ 0.27
POLR2J3-221ENST00000621093 DAPK1P53355 1430 aa16.75■□□□□ 0.27
POLR2J3-221ENST00000621093 ABCA6Q8N139 1617 aa16.74■□□□□ 0.27
POLR2J3-221ENST00000621093 YEATS2Q9ULM3 1422 aa16.74■□□□□ 0.27
POLR2J3-221ENST00000621093 ATP7AQ04656 1500 aa16.74■□□□□ 0.27
POLR2J3-221ENST00000621093 ZFYVE16Q7Z3T8 1539 aa16.74■□□□□ 0.27
POLR2J3-221ENST00000621093 ADGBQ8N7X0 1667 aa16.73■□□□□ 0.27
POLR2J3-221ENST00000621093 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
POLR2J3-221ENST00000621093 MAST1Q9Y2H9 1570 aa16.72■□□□□ 0.27
POLR2J3-221ENST00000621093 ARHGEF40Q8TER5 1519 aa16.72■□□□□ 0.27
POLR2J3-221ENST00000621093 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
POLR2J3-221ENST00000621093 MLH3Q9UHC1 1453 aa16.72■□□□□ 0.27
POLR2J3-221ENST00000621093 DIP2CQ9Y2E4 1556 aa16.72■□□□□ 0.27
POLR2J3-221ENST00000621093 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
POLR2J3-221ENST00000621093 PTPRKQ15262 1439 aa16.71■□□□□ 0.27
POLR2J3-221ENST00000621093 ITGAEP38570 1179 aa16.71■□□□□ 0.27
POLR2J3-221ENST00000621093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.71■□□□□ 0.27
POLR2J3-221ENST00000621093 RSPH4AQ5TD94 716 aa16.7■□□□□ 0.26
POLR2J3-221ENST00000621093 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
POLR2J3-221ENST00000621093 MAGI2Q86UL8 1455 aa16.69■□□□□ 0.26
POLR2J3-221ENST00000621093 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
POLR2J3-221ENST00000621093 SHANK2Q9UPX8 1470 aa16.68■□□□□ 0.26
POLR2J3-221ENST00000621093 TSPY4P0CV99 314 aa16.67■□□□□ 0.26
POLR2J3-221ENST00000621093 TSPY10P0CW01 314 aa16.67■□□□□ 0.26
POLR2J3-221ENST00000621093 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
POLR2J3-221ENST00000621093 PLXNC1O60486 1568 aa16.66■□□□□ 0.26
POLR2J3-221ENST00000621093 ATP10AO60312 1499 aa16.64■□□□□ 0.25
POLR2J3-221ENST00000621093 ADGRL2O95490 1459 aa16.62■□□□□ 0.25
POLR2J3-221ENST00000621093 REREQ9P2R6 1566 aa16.61■□□□□ 0.25
POLR2J3-221ENST00000621093 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
POLR2J3-221ENST00000621093 A2MP01023 1474 aa16.61■□□□□ 0.25
POLR2J3-221ENST00000621093 NCOA1Q15788 1441 aa16.6■□□□□ 0.25
POLR2J3-221ENST00000621093 ANKRD30AQ9BXX3 1397 aa16.59■□□□□ 0.25
POLR2J3-221ENST00000621093 KIF15Q9NS87 1388 aa16.58■□□□□ 0.24
POLR2J3-221ENST00000621093 GCC2Q8IWJ2 1684 aa16.58■□□□□ 0.24
POLR2J3-221ENST00000621093 DUOX2Q9NRD8 1548 aa16.57■□□□□ 0.24
POLR2J3-221ENST00000621093 ROCK1Q13464 1354 aa16.56■□□□□ 0.24
POLR2J3-221ENST00000621093 DHX29Q7Z478 1369 aaKnown RBP16.56■□□□□ 0.24
POLR2J3-221ENST00000621093 BCORL1Q5H9F3 1711 aa16.56■□□□□ 0.24
POLR2J3-221ENST00000621093 AGLP35573 1532 aa16.55■□□□□ 0.24
POLR2J3-221ENST00000621093 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
POLR2J3-221ENST00000621093 EIF2AK4Q9P2K8 1649 aaKnown RBP16.54■□□□□ 0.24
POLR2J3-221ENST00000621093 MLECQ14165 292 aa16.52■□□□□ 0.24
POLR2J3-221ENST00000621093 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
POLR2J3-221ENST00000621093 NAIPQ13075 1403 aa16.51■□□□□ 0.23
POLR2J3-221ENST00000621093 RNF17Q9BXT8 1623 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-221ENST00000621093 KIF3BO15066 747 aa16.5■□□□□ 0.23
POLR2J3-221ENST00000621093 ERBINQ96RT1 1412 aa16.5■□□□□ 0.23
POLR2J3-221ENST00000621093 ADAMTSL3P82987 1691 aa16.5■□□□□ 0.23
POLR2J3-221ENST00000621093 MROH1Q8NDA8 1641 aa16.49■□□□□ 0.23
POLR2J3-221ENST00000621093 FER1L4A9Z1Z3 1794 aa16.49■□□□□ 0.23
POLR2J3-221ENST00000621093 ANKRD50Q9ULJ7 1429 aa16.49■□□□□ 0.23
POLR2J3-221ENST00000621093 DEPDC5O75140 1603 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms