RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 EFCAB2Q5VUJ9 269 aa28.81■■■□□ 2.2
LITAF-220ENST00000620789 SUPT6HQ7KZ85 1726 aaKnown RBP28.77■■■□□ 2.2
LITAF-220ENST00000620789 GPATCH8Q9UKJ3 1502 aaKnown RBP28.77■■■□□ 2.2
LITAF-220ENST00000620789 ADGRL1O94910 1474 aa28.77■■■□□ 2.2
LITAF-220ENST00000620789 APLP2Q06481 763 aa28.76■■■□□ 2.19
LITAF-220ENST00000620789 CCNB3Q8WWL7 1395 aa28.75■■■□□ 2.19
LITAF-220ENST00000620789 DENND4BO75064 1496 aaPredicted RBP28.75■■■□□ 2.19
LITAF-220ENST00000620789 FRMPD1Q5SYB0 1578 aa28.74■■■□□ 2.19
LITAF-220ENST00000620789 NCOA2Q15596 1464 aa28.73■■■□□ 2.19
LITAF-220ENST00000620789 RAPGEF3O95398 923 aa28.73■■■□□ 2.19
LITAF-220ENST00000620789 KANK4Q5T7N3 995 aaPredicted RBP28.73■■■□□ 2.19
LITAF-220ENST00000620789 RICTORQ6R327 1708 aa28.72■■■□□ 2.19
LITAF-220ENST00000620789 SCAPERQ9BY12 1400 aa28.71■■■□□ 2.19
LITAF-220ENST00000620789 ITSN2Q9NZM3 1697 aa28.69■■■□□ 2.18
LITAF-220ENST00000620789 POGZQ7Z3K3 1410 aa28.67■■■□□ 2.18
LITAF-220ENST00000620789 ABCC1P33527 1531 aa28.66■■■□□ 2.18
LITAF-220ENST00000620789 CFDP1Q9UEE9 299 aaPredicted RBP28.66■■■□□ 2.18
LITAF-220ENST00000620789 SAMD9LQ8IVG5 1584 aa28.64■■■□□ 2.18
LITAF-220ENST00000620789 ZNF777Q9ULD5 760 aaPredicted RBP28.62■■■□□ 2.17
LITAF-220ENST00000620789 ZMYM4Q5VZL5 1548 aa28.62■■■□□ 2.17
LITAF-220ENST00000620789 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
LITAF-220ENST00000620789 ARHGEF12Q9NZN5 1544 aa28.59■■■□□ 2.17
LITAF-220ENST00000620789 PLEKHH2Q8IVE3 1493 aa28.57■■■□□ 2.16
LITAF-220ENST00000620789 KDM5CP41229 1560 aa28.55■■■□□ 2.16
LITAF-220ENST00000620789 SYCP2Q9BX26 1530 aa28.55■■■□□ 2.16
LITAF-220ENST00000620789 MAGI2Q86UL8 1455 aa28.54■■■□□ 2.16
LITAF-220ENST00000620789 KIAA1107Q9UPP5 1409 aa28.54■■■□□ 2.16
LITAF-220ENST00000620789 ARHGEF40Q8TER5 1519 aa28.53■■■□□ 2.16
LITAF-220ENST00000620789 TRAPPC8Q9Y2L5 1435 aa28.53■■■□□ 2.16
LITAF-220ENST00000620789 AFAP1Q8N556 730 aa28.53■■■□□ 2.16
LITAF-220ENST00000620789 ZFYVE16Q7Z3T8 1539 aa28.52■■■□□ 2.16
LITAF-220ENST00000620789 MYOM3Q5VTT5 1437 aa28.52■■■□□ 2.16
LITAF-220ENST00000620789 ZNF644Q9H582 1327 aaPredicted RBP28.5■■■□□ 2.15
LITAF-220ENST00000620789 HNRNPMP52272 730 aaKnown RBP eCLIP28.49■■■□□ 2.151e-6■■■□□ 15.6
LITAF-220ENST00000620789 CAMSAP2Q08AD1 1489 aa28.48■■■□□ 2.15
LITAF-220ENST00000620789 YEATS2Q9ULM3 1422 aa28.48■■■□□ 2.15
LITAF-220ENST00000620789 HECW2Q9P2P5 1572 aa28.47■■■□□ 2.15
LITAF-220ENST00000620789 MIA2Q96PC5 1412 aa28.46■■■□□ 2.15
LITAF-220ENST00000620789 MLH3Q9UHC1 1453 aa28.45■■■□□ 2.14
LITAF-220ENST00000620789 MBD5Q9P267 1494 aa28.44■■■□□ 2.14
LITAF-220ENST00000620789 MYT1LQ9UL68 1186 aa28.39■■■□□ 2.14
LITAF-220ENST00000620789 KIDINS220Q9ULH0 1771 aa28.38■■■□□ 2.13
LITAF-220ENST00000620789 ATP10AO60312 1499 aa28.38■■■□□ 2.13
LITAF-220ENST00000620789 DIP2CQ9Y2E4 1556 aa28.37■■■□□ 2.13
LITAF-220ENST00000620789 SPAG9O60271 1321 aaKnown RBP28.37■■■□□ 2.13
LITAF-220ENST00000620789 ABCA6Q8N139 1617 aa28.36■■■□□ 2.13
LITAF-220ENST00000620789 FGD6Q6ZV73 1430 aa28.36■■■□□ 2.13
LITAF-220ENST00000620789 CCDC141Q6ZP82 1450 aa28.36■■■□□ 2.13
LITAF-220ENST00000620789 ARHGEF5Q12774 1597 aa28.36■■■□□ 2.13
LITAF-220ENST00000620789 INO80Q9ULG1 1556 aaPredicted RBP28.36■■■□□ 2.13
LITAF-220ENST00000620789 C9orf84Q5VXU9 1444 aa28.35■■■□□ 2.13
LITAF-220ENST00000620789 PTPN23Q9H3S7 1636 aa28.34■■■□□ 2.13
LITAF-220ENST00000620789 ATP7AQ04656 1500 aa28.33■■■□□ 2.13
LITAF-220ENST00000620789 KDM4FA0A1W2PPD8 638 aa28.33■■■□□ 2.13
LITAF-220ENST00000620789 RSPH4AQ5TD94 716 aa28.33■■■□□ 2.13
LITAF-220ENST00000620789 SIGLEC1Q9BZZ2 1709 aa28.32■■■□□ 2.12
LITAF-220ENST00000620789 REREQ9P2R6 1566 aa28.3■■■□□ 2.12
LITAF-220ENST00000620789 ARID4BQ4LE39 1312 aaPredicted RBP28.3■■■□□ 2.12
LITAF-220ENST00000620789 TCOF1Q13428 1488 aaKnown RBP28.29■■■□□ 2.12
LITAF-220ENST00000620789 PPARGC1BQ86YN6 1023 aaKnown RBP28.29■■■□□ 2.12
LITAF-220ENST00000620789 RTEL1-TNFRSF6BF6WH68 1400 aa28.27■■■□□ 2.12
LITAF-220ENST00000620789 BCORL1Q5H9F3 1711 aa28.26■■■□□ 2.12
LITAF-220ENST00000620789 TSPY4P0CV99 314 aa28.22■■■□□ 2.11
LITAF-220ENST00000620789 TSPY10P0CW01 314 aa28.22■■■□□ 2.11
LITAF-220ENST00000620789 ADAMTSL3P82987 1691 aa28.22■■■□□ 2.11
LITAF-220ENST00000620789 MAST1Q9Y2H9 1570 aa28.21■■■□□ 2.11
LITAF-220ENST00000620789 ADGBQ8N7X0 1667 aa28.19■■■□□ 2.1
LITAF-220ENST00000620789 AGLP35573 1532 aa28.19■■■□□ 2.1
LITAF-220ENST00000620789 DNMT1P26358 1616 aaKnown RBP28.19■■■□□ 2.1
LITAF-220ENST00000620789 CROCC2H7BZ55 1655 aa28.17■■■□□ 2.1
LITAF-220ENST00000620789 PLXNC1O60486 1568 aa28.17■■■□□ 2.1
LITAF-220ENST00000620789 A2MP01023 1474 aa28.17■■■□□ 2.1
LITAF-220ENST00000620789 AEBP2Q6ZN18 517 aaPredicted RBP28.17■■■□□ 2.1
LITAF-220ENST00000620789 ABCC5O15440 1437 aa28.17■■■□□ 2.1
LITAF-220ENST00000620789 DAPK1P53355 1430 aa28.16■■■□□ 2.1
LITAF-220ENST00000620789 SHANK2Q9UPX8 1470 aa28.15■■■□□ 2.1
LITAF-220ENST00000620789 MADDQ8WXG6 1647 aa28.14■■■□□ 2.1
LITAF-220ENST00000620789 FAM50AQ14320 339 aaKnown RBP28.14■■■□□ 2.1
LITAF-220ENST00000620789 MLECQ14165 292 aa28.13■■■□□ 2.09
LITAF-220ENST00000620789 DHX29Q7Z478 1369 aaKnown RBP28.09■■■□□ 2.09
LITAF-220ENST00000620789 FER1L4A9Z1Z3 1794 aa28.06■■■□□ 2.08
LITAF-220ENST00000620789 RIMS1Q86UR5 1692 aaKnown RBP28.06■■■□□ 2.08
LITAF-220ENST00000620789 PTPRMP28827 1452 aa28.04■■■□□ 2.08
LITAF-220ENST00000620789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.04■■■□□ 2.08
LITAF-220ENST00000620789 RRBP1Q9P2E9 1410 aaKnown RBP28.02■■■□□ 2.08
LITAF-220ENST00000620789 DUOX2Q9NRD8 1548 aa27.99■■■□□ 2.07
LITAF-220ENST00000620789 CHIC2Q9UKJ5 165 aa27.99■■■□□ 2.07
LITAF-220ENST00000620789 KIF15Q9NS87 1388 aa27.99■■■□□ 2.07
LITAF-220ENST00000620789 ADGRL2O95490 1459 aa27.98■■■□□ 2.07
LITAF-220ENST00000620789 ANKRD30AQ9BXX3 1397 aa27.98■■■□□ 2.07
LITAF-220ENST00000620789 PTPRKQ15262 1439 aa27.95■■■□□ 2.07
LITAF-220ENST00000620789 NCOA1Q15788 1441 aa27.95■■■□□ 2.07
LITAF-220ENST00000620789 KIF3BO15066 747 aa27.95■■■□□ 2.06
LITAF-220ENST00000620789 RRP7BPQ9NSQ0 103 aa27.95■■■□□ 2.06
LITAF-220ENST00000620789 EIF2AK4Q9P2K8 1649 aaKnown RBP27.95■■■□□ 2.06
LITAF-220ENST00000620789 GGT6Q6P531 493 aa27.94■■■□□ 2.06
LITAF-220ENST00000620789 ESF1Q9H501 851 aaKnown RBP27.93■■■□□ 2.06
LITAF-220ENST00000620789 ERBINQ96RT1 1412 aa27.92■■■□□ 2.06
LITAF-220ENST00000620789 CNTLNQ9NXG0 1405 aa27.92■■■□□ 2.06
LITAF-220ENST00000620789 RNF17Q9BXT8 1623 aaKnown RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms