RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FANCAO15360 1455 aa21.19■□□□□ 0.98
NEK3-210ENST00000620675 ARAP3Q8WWN8 1544 aa21.17■□□□□ 0.98
NEK3-210ENST00000620675 SAMD9LQ8IVG5 1584 aa21.17■□□□□ 0.98
NEK3-210ENST00000620675 ZNF644Q9H582 1327 aaPredicted RBP21.16■□□□□ 0.98
NEK3-210ENST00000620675 TEX14Q8IWB6 1497 aa21.16■□□□□ 0.98
NEK3-210ENST00000620675 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
NEK3-210ENST00000620675 MYOM3Q5VTT5 1437 aa21.16■□□□□ 0.98
NEK3-210ENST00000620675 COL17A1Q9UMD9 1497 aaPredicted RBP21.16■□□□□ 0.98
NEK3-210ENST00000620675 CFDP1Q9UEE9 299 aaPredicted RBP21.15■□□□□ 0.98
NEK3-210ENST00000620675 AKNAQ7Z591 1439 aa21.13■□□□□ 0.97
NEK3-210ENST00000620675 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
NEK3-210ENST00000620675 NEO1Q92859 1461 aa21.12■□□□□ 0.97
NEK3-210ENST00000620675 CFAP74Q9C0B2 1584 aa21.12■□□□□ 0.97
NEK3-210ENST00000620675 ARHGEF12Q9NZN5 1544 aa21.11■□□□□ 0.97
NEK3-210ENST00000620675 ADGRL1O94910 1474 aa21.09■□□□□ 0.97
NEK3-210ENST00000620675 FGD6Q6ZV73 1430 aa21.09■□□□□ 0.97
NEK3-210ENST00000620675 ABCC1P33527 1531 aa21.09■□□□□ 0.97
NEK3-210ENST00000620675 PTPN23Q9H3S7 1636 aa21.08■□□□□ 0.97
NEK3-210ENST00000620675 CAMSAP2Q08AD1 1489 aa21.08■□□□□ 0.97
NEK3-210ENST00000620675 SYCP2Q9BX26 1530 aa21.08■□□□□ 0.96
NEK3-210ENST00000620675 KDM6BO15054 1643 aa21.08■□□□□ 0.96
NEK3-210ENST00000620675 RICTORQ6R327 1708 aa21.06■□□□□ 0.96
NEK3-210ENST00000620675 SCAPERQ9BY12 1400 aa21.06■□□□□ 0.96
NEK3-210ENST00000620675 FRMPD1Q5SYB0 1578 aa21.06■□□□□ 0.96
NEK3-210ENST00000620675 RAPGEF3O95398 923 aa21.06■□□□□ 0.96
NEK3-210ENST00000620675 HNRNPMP52272 730 aaKnown RBP eCLIP21.05■□□□□ 0.96
NEK3-210ENST00000620675 MIA2Q96PC5 1412 aa21.05■□□□□ 0.96
NEK3-210ENST00000620675 TRAPPC8Q9Y2L5 1435 aa21.03■□□□□ 0.96
NEK3-210ENST00000620675 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
NEK3-210ENST00000620675 MBD5Q9P267 1494 aa21.01■□□□□ 0.95
NEK3-210ENST00000620675 DENND4BO75064 1496 aaPredicted RBP21■□□□□ 0.95
NEK3-210ENST00000620675 TCOF1Q13428 1488 aaKnown RBP21■□□□□ 0.95
NEK3-210ENST00000620675 POGZQ7Z3K3 1410 aa20.99■□□□□ 0.95
NEK3-210ENST00000620675 KIAA1107Q9UPP5 1409 aa20.98■□□□□ 0.95
NEK3-210ENST00000620675 FAM50AQ14320 339 aaKnown RBP20.98■□□□□ 0.95
NEK3-210ENST00000620675 PLEKHH2Q8IVE3 1493 aa20.96■□□□□ 0.95
NEK3-210ENST00000620675 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
NEK3-210ENST00000620675 KDM5CP41229 1560 aa20.94■□□□□ 0.94
NEK3-210ENST00000620675 ARHGEF5Q12774 1597 aa20.94■□□□□ 0.94
NEK3-210ENST00000620675 ZNF518AQ6AHZ1 1483 aa20.93■□□□□ 0.94
NEK3-210ENST00000620675 DNMT1P26358 1616 aaKnown RBP20.92■□□□□ 0.94
NEK3-210ENST00000620675 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
NEK3-210ENST00000620675 KIDINS220Q9ULH0 1771 aa20.91■□□□□ 0.94
NEK3-210ENST00000620675 CCDC141Q6ZP82 1450 aa20.91■□□□□ 0.94
NEK3-210ENST00000620675 ABCC5O15440 1437 aa20.9■□□□□ 0.94
NEK3-210ENST00000620675 ZMYM4Q5VZL5 1548 aa20.9■□□□□ 0.94
NEK3-210ENST00000620675 YEATS2Q9ULM3 1422 aa20.89■□□□□ 0.93
NEK3-210ENST00000620675 HECW2Q9P2P5 1572 aa20.89■□□□□ 0.93
NEK3-210ENST00000620675 DAPK1P53355 1430 aa20.89■□□□□ 0.93
NEK3-210ENST00000620675 PTPRKQ15262 1439 aa20.89■□□□□ 0.93
NEK3-210ENST00000620675 ITGAEP38570 1179 aa20.87■□□□□ 0.93
NEK3-210ENST00000620675 INO80Q9ULG1 1556 aaPredicted RBP20.87■□□□□ 0.93
NEK3-210ENST00000620675 ZFYVE16Q7Z3T8 1539 aa20.86■□□□□ 0.93
NEK3-210ENST00000620675 ABCA6Q8N139 1617 aa20.86■□□□□ 0.93
NEK3-210ENST00000620675 CHIC2Q9UKJ5 165 aa20.85■□□□□ 0.93
NEK3-210ENST00000620675 SPAG9O60271 1321 aaKnown RBP20.85■□□□□ 0.93
NEK3-210ENST00000620675 ATP7AQ04656 1500 aa20.85■□□□□ 0.93
NEK3-210ENST00000620675 SIGLEC1Q9BZZ2 1709 aa20.84■□□□□ 0.93
NEK3-210ENST00000620675 MLH3Q9UHC1 1453 aa20.84■□□□□ 0.93
NEK3-210ENST00000620675 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.83■□□□□ 0.93
NEK3-210ENST00000620675 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.93
NEK3-210ENST00000620675 C9orf84Q5VXU9 1444 aa20.83■□□□□ 0.92
NEK3-210ENST00000620675 DIP2CQ9Y2E4 1556 aa20.82■□□□□ 0.92
NEK3-210ENST00000620675 ARHGEF40Q8TER5 1519 aa20.82■□□□□ 0.92
NEK3-210ENST00000620675 ADGBQ8N7X0 1667 aa20.81■□□□□ 0.92
NEK3-210ENST00000620675 MAST1Q9Y2H9 1570 aa20.81■□□□□ 0.92
NEK3-210ENST00000620675 RSPH4AQ5TD94 716 aa20.81■□□□□ 0.92
NEK3-210ENST00000620675 TSPY4P0CV99 314 aa20.79■□□□□ 0.92
NEK3-210ENST00000620675 TSPY10P0CW01 314 aa20.79■□□□□ 0.92
NEK3-210ENST00000620675 MAGI2Q86UL8 1455 aa20.79■□□□□ 0.92
NEK3-210ENST00000620675 SHANK2Q9UPX8 1470 aa20.79■□□□□ 0.92
NEK3-210ENST00000620675 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.91
NEK3-210ENST00000620675 PLXNC1O60486 1568 aa20.74■□□□□ 0.91
NEK3-210ENST00000620675 RRP7BPQ9NSQ0 103 aa20.73■□□□□ 0.91
NEK3-210ENST00000620675 ATP10AO60312 1499 aa20.73■□□□□ 0.91
NEK3-210ENST00000620675 NCOA1Q15788 1441 aa20.73■□□□□ 0.91
NEK3-210ENST00000620675 ADGRL2O95490 1459 aa20.72■□□□□ 0.91
NEK3-210ENST00000620675 KIF15Q9NS87 1388 aa20.69■□□□□ 0.9
NEK3-210ENST00000620675 A2MP01023 1474 aa20.69■□□□□ 0.9
NEK3-210ENST00000620675 ANKRD30AQ9BXX3 1397 aa20.68■□□□□ 0.9
NEK3-210ENST00000620675 REREQ9P2R6 1566 aa20.66■□□□□ 0.9
NEK3-210ENST00000620675 ROCK1Q13464 1354 aa20.65■□□□□ 0.9
NEK3-210ENST00000620675 DHX29Q7Z478 1369 aaKnown RBP20.64■□□□□ 0.9
NEK3-210ENST00000620675 DUOX2Q9NRD8 1548 aa20.64■□□□□ 0.89
NEK3-210ENST00000620675 GCC2Q8IWJ2 1684 aa20.63■□□□□ 0.89
NEK3-210ENST00000620675 ARID4BQ4LE39 1312 aaPredicted RBP20.62■□□□□ 0.89
NEK3-210ENST00000620675 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
NEK3-210ENST00000620675 NAIPQ13075 1403 aa20.61■□□□□ 0.89
NEK3-210ENST00000620675 MLECQ14165 292 aa20.61■□□□□ 0.89
NEK3-210ENST00000620675 AGLP35573 1532 aa20.6■□□□□ 0.89
NEK3-210ENST00000620675 BCORL1Q5H9F3 1711 aa20.59■□□□□ 0.89
NEK3-210ENST00000620675 ANKRD50Q9ULJ7 1429 aa20.59■□□□□ 0.89
NEK3-210ENST00000620675 KIF3BO15066 747 aa20.58■□□□□ 0.89
NEK3-210ENST00000620675 HFM1A2PYH4 1435 aa20.58■□□□□ 0.88
NEK3-210ENST00000620675 EIF2AK4Q9P2K8 1649 aaKnown RBP20.57■□□□□ 0.88
NEK3-210ENST00000620675 ERBINQ96RT1 1412 aa20.56■□□□□ 0.88
NEK3-210ENST00000620675 MROH1Q8NDA8 1641 aa20.56■□□□□ 0.88
NEK3-210ENST00000620675 GGT6Q6P531 493 aa20.54■□□□□ 0.88
NEK3-210ENST00000620675 RNF17Q9BXT8 1623 aaKnown RBP20.54■□□□□ 0.88
NEK3-210ENST00000620675 DEPDC5O75140 1603 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms