RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 APLP2Q06481 763 aa20.97■□□□□ 0.95
GRIA3-208ENST00000620581 SAMD9LQ8IVG5 1584 aa20.96■□□□□ 0.95
GRIA3-208ENST00000620581 NPM1P06748 294 aaKnown RBP eCLIP20.96■□□□□ 0.95
GRIA3-208ENST00000620581 FGD6Q6ZV73 1430 aa20.95■□□□□ 0.94
GRIA3-208ENST00000620581 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
GRIA3-208ENST00000620581 ZMYM4Q5VZL5 1548 aa20.94■□□□□ 0.94
GRIA3-208ENST00000620581 BCORL1Q5H9F3 1711 aa20.93■□□□□ 0.94
GRIA3-208ENST00000620581 EHMT2Q96KQ7 1210 aa20.93■□□□□ 0.94
GRIA3-208ENST00000620581 KDM5CP41229 1560 aa20.92■□□□□ 0.94
GRIA3-208ENST00000620581 PLXNC1O60486 1568 aa20.92■□□□□ 0.94
GRIA3-208ENST00000620581 RICTORQ6R327 1708 aa20.89■□□□□ 0.94
GRIA3-208ENST00000620581 ADGRL2O95490 1459 aa20.89■□□□□ 0.93
GRIA3-208ENST00000620581 REREQ9P2R6 1566 aa20.89■□□□□ 0.93
GRIA3-208ENST00000620581 GCC2Q8IWJ2 1684 aa20.87■□□□□ 0.93
GRIA3-208ENST00000620581 INO80Q9ULG1 1556 aaPredicted RBP20.87■□□□□ 0.93
GRIA3-208ENST00000620581 CAMSAP2Q08AD1 1489 aa20.87■□□□□ 0.93
GRIA3-208ENST00000620581 CCNB3Q8WWL7 1395 aa20.87■□□□□ 0.93
GRIA3-208ENST00000620581 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
GRIA3-208ENST00000620581 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
GRIA3-208ENST00000620581 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
GRIA3-208ENST00000620581 ARHGAP5Q13017 1502 aa20.83■□□□□ 0.92
GRIA3-208ENST00000620581 MBD5Q9P267 1494 aa20.83■□□□□ 0.92
GRIA3-208ENST00000620581 RTEL1-TNFRSF6BF6WH68 1400 aa20.82■□□□□ 0.92
GRIA3-208ENST00000620581 CD109Q6YHK3 1445 aa20.82■□□□□ 0.92
GRIA3-208ENST00000620581 RSPH4AQ5TD94 716 aa20.81■□□□□ 0.92
GRIA3-208ENST00000620581 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
GRIA3-208ENST00000620581 ACIN1Q9UKV3 1341 aaKnown RBP20.81■□□□□ 0.92
GRIA3-208ENST00000620581 FANCAO15360 1455 aa20.8■□□□□ 0.92
GRIA3-208ENST00000620581 EIF2AK4Q9P2K8 1649 aaKnown RBP20.8■□□□□ 0.92
GRIA3-208ENST00000620581 MAGI2Q86UL8 1455 aa20.8■□□□□ 0.92
GRIA3-208ENST00000620581 FAM135AQ9P2D6 1515 aa20.8■□□□□ 0.92
GRIA3-208ENST00000620581 ROCK1Q13464 1354 aa20.8■□□□□ 0.92
GRIA3-208ENST00000620581 CCDC141Q6ZP82 1450 aa20.78■□□□□ 0.92
GRIA3-208ENST00000620581 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
GRIA3-208ENST00000620581 HECW2Q9P2P5 1572 aa20.75■□□□□ 0.91
GRIA3-208ENST00000620581 POGZQ7Z3K3 1410 aa20.75■□□□□ 0.91
GRIA3-208ENST00000620581 ZNF518AQ6AHZ1 1483 aa20.74■□□□□ 0.91
GRIA3-208ENST00000620581 ZFYVE16Q7Z3T8 1539 aa20.73■□□□□ 0.91
GRIA3-208ENST00000620581 SYCP2Q9BX26 1530 aa20.72■□□□□ 0.91
GRIA3-208ENST00000620581 DAPK1P53355 1430 aa20.72■□□□□ 0.91
GRIA3-208ENST00000620581 ARHGEF12Q9NZN5 1544 aa20.69■□□□□ 0.9
GRIA3-208ENST00000620581 EFCAB2Q5VUJ9 269 aa20.69■□□□□ 0.9
GRIA3-208ENST00000620581 ADGRL1O94910 1474 aa20.69■□□□□ 0.9
GRIA3-208ENST00000620581 KIDINS220Q9ULH0 1771 aa20.69■□□□□ 0.9
GRIA3-208ENST00000620581 DEPDC5O75140 1603 aa20.68■□□□□ 0.9
GRIA3-208ENST00000620581 ARHGEF40Q8TER5 1519 aa20.67■□□□□ 0.9
GRIA3-208ENST00000620581 ABCC5O15440 1437 aa20.67■□□□□ 0.9
GRIA3-208ENST00000620581 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
GRIA3-208ENST00000620581 DENND4BO75064 1496 aaPredicted RBP20.65■□□□□ 0.9
GRIA3-208ENST00000620581 ATP7AQ04656 1500 aa20.65■□□□□ 0.9
GRIA3-208ENST00000620581 KDM5DQ9BY66 1539 aa20.65■□□□□ 0.9
GRIA3-208ENST00000620581 UNC13BO14795 1591 aa20.64■□□□□ 0.89
GRIA3-208ENST00000620581 AGLP35573 1532 aa20.64■□□□□ 0.89
GRIA3-208ENST00000620581 HRCP23327 699 aa20.63■□□□□ 0.89
GRIA3-208ENST00000620581 DUOX2Q9NRD8 1548 aa20.63■□□□□ 0.89
GRIA3-208ENST00000620581 ATP1B4Q9UN42 357 aaPredicted RBP20.62■□□□□ 0.89
GRIA3-208ENST00000620581 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
GRIA3-208ENST00000620581 TSPOAP1O95153 1857 aa20.61■□□□□ 0.89
GRIA3-208ENST00000620581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
GRIA3-208ENST00000620581 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
GRIA3-208ENST00000620581 CFDP1Q9UEE9 299 aaPredicted RBP20.61■□□□□ 0.89
GRIA3-208ENST00000620581 DIP2CQ9Y2E4 1556 aa20.6■□□□□ 0.89
GRIA3-208ENST00000620581 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
GRIA3-208ENST00000620581 ABCA6Q8N139 1617 aa20.59■□□□□ 0.89
GRIA3-208ENST00000620581 ZC3H13Q5T200 1668 aaKnown RBP20.59■□□□□ 0.89
GRIA3-208ENST00000620581 TRIM26Q12899 539 aaPredicted RBP20.58■□□□□ 0.89
GRIA3-208ENST00000620581 KDM6BO15054 1643 aa20.57■□□□□ 0.88
GRIA3-208ENST00000620581 C9orf84Q5VXU9 1444 aa20.57■□□□□ 0.88
GRIA3-208ENST00000620581 TTBK1Q5TCY1 1321 aaPredicted RBP20.56■□□□□ 0.88
GRIA3-208ENST00000620581 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
GRIA3-208ENST00000620581 SCAPERQ9BY12 1400 aa20.55■□□□□ 0.88
GRIA3-208ENST00000620581 FAM69CQ0P6D2 419 aa20.54■□□□□ 0.88
GRIA3-208ENST00000620581 NCOA1Q15788 1441 aa20.53■□□□□ 0.88
GRIA3-208ENST00000620581 TRAPPC8Q9Y2L5 1435 aa20.52■□□□□ 0.88
GRIA3-208ENST00000620581 PRDM15P57071 1507 aaPredicted RBP20.51■□□□□ 0.87
GRIA3-208ENST00000620581 PTPRKQ15262 1439 aa20.51■□□□□ 0.87
GRIA3-208ENST00000620581 LMTK2Q8IWU2 1503 aa20.5■□□□□ 0.87
GRIA3-208ENST00000620581 IQGAP3Q86VI3 1631 aa20.5■□□□□ 0.87
GRIA3-208ENST00000620581 ANKRD30AQ9BXX3 1397 aa20.49■□□□□ 0.87
GRIA3-208ENST00000620581 MROH2AA6NES4 1674 aa20.48■□□□□ 0.87
GRIA3-208ENST00000620581 NAIPQ13075 1403 aa20.47■□□□□ 0.87
GRIA3-208ENST00000620581 MROH1Q8NDA8 1641 aa20.46■□□□□ 0.87
GRIA3-208ENST00000620581 KCNH8Q96L42 1107 aa20.46■□□□□ 0.87
GRIA3-208ENST00000620581 ARID3CA6NKF2 412 aa20.44■□□□□ 0.86
GRIA3-208ENST00000620581 ATP10AO60312 1499 aa20.43■□□□□ 0.86
GRIA3-208ENST00000620581 COL17A1Q9UMD9 1497 aaPredicted RBP20.41■□□□□ 0.86
GRIA3-208ENST00000620581 A2MP01023 1474 aa20.4■□□□□ 0.86
GRIA3-208ENST00000620581 SETD5Q9C0A6 1442 aa20.4■□□□□ 0.86
GRIA3-208ENST00000620581 TET3O43151 1660 aa20.4■□□□□ 0.86
GRIA3-208ENST00000620581 NEURL4Q96JN8 1562 aa20.39■□□□□ 0.86
GRIA3-208ENST00000620581 DHX29Q7Z478 1369 aaKnown RBP20.39■□□□□ 0.85
GRIA3-208ENST00000620581 ZNF644Q9H582 1327 aaPredicted RBP20.36■□□□□ 0.85
GRIA3-208ENST00000620581 PPP6R1Q9UPN7 881 aa20.35■□□□□ 0.85
GRIA3-208ENST00000620581 SPAG9O60271 1321 aaKnown RBP20.34■□□□□ 0.85
GRIA3-208ENST00000620581 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
GRIA3-208ENST00000620581 SIGLEC1Q9BZZ2 1709 aa20.33■□□□□ 0.85
GRIA3-208ENST00000620581 TSPY4P0CV99 314 aa20.33■□□□□ 0.84
GRIA3-208ENST00000620581 TSPY10P0CW01 314 aa20.33■□□□□ 0.84
GRIA3-208ENST00000620581 ANKRD50Q9ULJ7 1429 aa20.32■□□□□ 0.84
GRIA3-208ENST00000620581 RPRD2Q5VT52 1461 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms