RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 NUP153P49790 1475 aaKnown RBP9.97□□□□□ -0.81
SRGAP3-213ENST00000618999 CFAP43Q8NDM7 1665 aa9.96□□□□□ -0.82
SRGAP3-213ENST00000618999 C14orf37Q86TY3 774 aa9.96□□□□□ -0.82
SRGAP3-213ENST00000618999 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
SRGAP3-213ENST00000618999 RAPGEF6Q8TEU7 1601 aa9.95□□□□□ -0.82
SRGAP3-213ENST00000618999 CHIC2Q9UKJ5 165 aa9.95□□□□□ -0.82
SRGAP3-213ENST00000618999 EHBP1L1Q8N3D4 1523 aa9.94□□□□□ -0.82
SRGAP3-213ENST00000618999 CFDP1Q9UEE9 299 aaPredicted RBP9.94□□□□□ -0.82
SRGAP3-213ENST00000618999 FGD6Q6ZV73 1430 aa9.94□□□□□ -0.82
SRGAP3-213ENST00000618999 MYOM3Q5VTT5 1437 aa9.93□□□□□ -0.82
SRGAP3-213ENST00000618999 UACAQ9BZF9 1416 aa9.93□□□□□ -0.82
SRGAP3-213ENST00000618999 NEFLP07196 543 aa9.93□□□□□ -0.82
SRGAP3-213ENST00000618999 CNKSR2Q8WXI2 1034 aa9.92□□□□□ -0.82
SRGAP3-213ENST00000618999 MAGI3Q5TCQ9 1506 aa9.92□□□□□ -0.82
SRGAP3-213ENST00000618999 TROQ12816 1431 aaPredicted RBP9.91□□□□□ -0.82
SRGAP3-213ENST00000618999 ERCC6L2Q5T890 1561 aa9.91□□□□□ -0.82
SRGAP3-213ENST00000618999 SUPT6HQ7KZ85 1726 aaKnown RBP9.91□□□□□ -0.82
SRGAP3-213ENST00000618999 ATP10BO94823 1461 aa9.91□□□□□ -0.82
SRGAP3-213ENST00000618999 NPM1P06748 294 aaKnown RBP eCLIP9.9□□□□□ -0.82
SRGAP3-213ENST00000618999 HOMEZQ8IX15 550 aa9.9□□□□□ -0.82
SRGAP3-213ENST00000618999 RRP7BPQ9NSQ0 103 aa9.9□□□□□ -0.82
SRGAP3-213ENST00000618999 NBR1Q14596 966 aa9.89□□□□□ -0.83
SRGAP3-213ENST00000618999 ZNF644Q9H582 1327 aaPredicted RBP9.89□□□□□ -0.83
SRGAP3-213ENST00000618999 LRRIQ1Q96JM4 1722 aa9.89□□□□□ -0.83
SRGAP3-213ENST00000618999 KDM2AQ9Y2K7 1162 aa9.89□□□□□ -0.83
SRGAP3-213ENST00000618999 SUPT16HQ9Y5B9 1047 aaKnown RBP9.88□□□□□ -0.83
SRGAP3-213ENST00000618999 CLASP1Q7Z460 1538 aa9.88□□□□□ -0.83
SRGAP3-213ENST00000618999 ARXQ96QS3 562 aa9.88□□□□□ -0.83
SRGAP3-213ENST00000618999 ABCA8O94911 1581 aa9.87□□□□□ -0.83
SRGAP3-213ENST00000618999 RAB3GAP2Q9H2M9 1393 aa9.87□□□□□ -0.83
SRGAP3-213ENST00000618999 SETD5Q9C0A6 1442 aa9.87□□□□□ -0.83
SRGAP3-213ENST00000618999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.86□□□□□ -0.83
SRGAP3-213ENST00000618999 TRIM52Q96A61 297 aa9.86□□□□□ -0.83
SRGAP3-213ENST00000618999 SHROOM2Q13796 1616 aa9.85□□□□□ -0.83
SRGAP3-213ENST00000618999 MIA2Q96PC5 1412 aa9.85□□□□□ -0.83
SRGAP3-213ENST00000618999 CYB5RLQ6IPT4 315 aa9.84□□□□□ -0.83
SRGAP3-213ENST00000618999 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.84□□□□□ -0.83
SRGAP3-213ENST00000618999 MAPK8IP2Q13387 824 aaPredicted RBP9.84□□□□□ -0.83
SRGAP3-213ENST00000618999 TSPY4P0CV99 314 aa9.83□□□□□ -0.84
SRGAP3-213ENST00000618999 TSPY10P0CW01 314 aa9.83□□□□□ -0.84
SRGAP3-213ENST00000618999 ABCC2Q92887 1545 aa9.83□□□□□ -0.84
SRGAP3-213ENST00000618999 PTPN23Q9H3S7 1636 aa9.82□□□□□ -0.84
SRGAP3-213ENST00000618999 HNRNPMP52272 730 aaKnown RBP eCLIP9.82□□□□□ -0.84
SRGAP3-213ENST00000618999 ARHGEF11O15085 1522 aa9.82□□□□□ -0.84
SRGAP3-213ENST00000618999 DHX57Q6P158 1386 aaKnown RBP9.82□□□□□ -0.84
SRGAP3-213ENST00000618999 PTPRKQ15262 1439 aa9.82□□□□□ -0.84
SRGAP3-213ENST00000618999 GPATCH8Q9UKJ3 1502 aaKnown RBP9.81□□□□□ -0.84
SRGAP3-213ENST00000618999 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
SRGAP3-213ENST00000618999 ANP32EQ9BTT0 268 aa9.8□□□□□ -0.84
SRGAP3-213ENST00000618999 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
SRGAP3-213ENST00000618999 KIF14Q15058 1648 aa9.79□□□□□ -0.84
SRGAP3-213ENST00000618999 ERICH6Q7L0X2 663 aa9.79□□□□□ -0.84
SRGAP3-213ENST00000618999 EFCAB2Q5VUJ9 269 aa9.78□□□□□ -0.84
SRGAP3-213ENST00000618999 TCOF1Q13428 1488 aaKnown RBP9.77□□□□□ -0.84
SRGAP3-213ENST00000618999 UHRF1BP1LA0JNW5 1464 aa9.77□□□□□ -0.85
SRGAP3-213ENST00000618999 ABCC5O15440 1437 aa9.77□□□□□ -0.85
SRGAP3-213ENST00000618999 DAPK1P53355 1430 aa9.77□□□□□ -0.85
SRGAP3-213ENST00000618999 TSHZ2Q9NRE2 1034 aa9.76□□□□□ -0.85
SRGAP3-213ENST00000618999 CAMSAP2Q08AD1 1489 aa9.76□□□□□ -0.85
SRGAP3-213ENST00000618999 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
SRGAP3-213ENST00000618999 SIN3AQ96ST3 1273 aa9.76□□□□□ -0.85
SRGAP3-213ENST00000618999 NAIPQ13075 1403 aa9.76□□□□□ -0.85
SRGAP3-213ENST00000618999 KDM5BQ9UGL1 1544 aa9.76□□□□□ -0.85
SRGAP3-213ENST00000618999 ABCC10Q5T3U5 1492 aa9.75□□□□□ -0.85
SRGAP3-213ENST00000618999 ANP32CO43423 234 aa9.75□□□□□ -0.85
SRGAP3-213ENST00000618999 DDX10Q13206 875 aaKnown RBP9.75□□□□□ -0.85
SRGAP3-213ENST00000618999 ARHGAP5Q13017 1502 aa9.74□□□□□ -0.85
SRGAP3-213ENST00000618999 ANKRD30AQ9BXX3 1397 aa9.74□□□□□ -0.85
SRGAP3-213ENST00000618999 RSPH4AQ5TD94 716 aa9.74□□□□□ -0.85
SRGAP3-213ENST00000618999 ARID3AQ99856 593 aa9.73□□□□□ -0.85
SRGAP3-213ENST00000618999 ASXL2Q76L83 1435 aa9.72□□□□□ -0.85
SRGAP3-213ENST00000618999 ZCCHC11Q5TAX3 1644 aaKnown RBP9.72□□□□□ -0.85
SRGAP3-213ENST00000618999 ITSN2Q9NZM3 1697 aa9.72□□□□□ -0.85
SRGAP3-213ENST00000618999 WDR7Q9Y4E6 1490 aa9.71□□□□□ -0.85
SRGAP3-213ENST00000618999 ADCY10Q96PN6 1610 aa9.71□□□□□ -0.85
SRGAP3-213ENST00000618999 MPHOSPH9Q99550 1183 aa9.71□□□□□ -0.86
SRGAP3-213ENST00000618999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.71□□□□□ -0.86
SRGAP3-213ENST00000618999 ROCK1Q13464 1354 aa9.71□□□□□ -0.86
SRGAP3-213ENST00000618999 AKNAQ7Z591 1439 aa9.7□□□□□ -0.86
SRGAP3-213ENST00000618999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.7□□□□□ -0.86
SRGAP3-213ENST00000618999 PLCH2O75038 1416 aa9.7□□□□□ -0.86
SRGAP3-213ENST00000618999 AFAP1Q8N556 730 aa9.7□□□□□ -0.86
SRGAP3-213ENST00000618999 C9orf84Q5VXU9 1444 aa9.7□□□□□ -0.86
SRGAP3-213ENST00000618999 NCOA1Q15788 1441 aa9.69□□□□□ -0.86
SRGAP3-213ENST00000618999 KLHL34Q8N239 644 aa9.68□□□□□ -0.86
SRGAP3-213ENST00000618999 DNMT1P26358 1616 aaKnown RBP9.68□□□□□ -0.86
SRGAP3-213ENST00000618999 TTC37Q6PGP7 1564 aa9.68□□□□□ -0.86
SRGAP3-213ENST00000618999 KIF15Q9NS87 1388 aa9.68□□□□□ -0.86
SRGAP3-213ENST00000618999 CDC42BPAQ5VT25 1732 aa9.68□□□□□ -0.86
SRGAP3-213ENST00000618999 SPAG9O60271 1321 aaKnown RBP9.67□□□□□ -0.86
SRGAP3-213ENST00000618999 ANKRD50Q9ULJ7 1429 aa9.67□□□□□ -0.86
SRGAP3-213ENST00000618999 CCDC141Q6ZP82 1450 aa9.67□□□□□ -0.86
SRGAP3-213ENST00000618999 TONSLQ96HA7 1378 aa9.67□□□□□ -0.86
SRGAP3-213ENST00000618999 PLEKHH2Q8IVE3 1493 aa9.66□□□□□ -0.86
SRGAP3-213ENST00000618999 NUP155O75694 1391 aa9.66□□□□□ -0.86
SRGAP3-213ENST00000618999 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.86
SRGAP3-213ENST00000618999 SYCP2Q9BX26 1530 aa9.65□□□□□ -0.86
SRGAP3-213ENST00000618999 MBD5Q9P267 1494 aa9.65□□□□□ -0.86
SRGAP3-213ENST00000618999 CD109Q6YHK3 1445 aa9.65□□□□□ -0.86
SRGAP3-213ENST00000618999 PKD2Q13563 968 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms