RNA–Protein interactions for RNA: ENST00000618785.4

SNX25-207, Transcript of sorting nexin 25, humanhuman

TSL 5 BASIC

Gene SNX25, Length 3,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-207ENST00000618785 NEO1Q92859 1461 aa11.15□□□□□ -0.62
SNX25-207ENST00000618785 PLCH2O75038 1416 aa11.15□□□□□ -0.62
SNX25-207ENST00000618785 ARAP3Q8WWN8 1544 aa11.13□□□□□ -0.63
SNX25-207ENST00000618785 EFCAB2Q5VUJ9 269 aa11.13□□□□□ -0.63
SNX25-207ENST00000618785 CFAP74Q9C0B2 1584 aa11.13□□□□□ -0.63
SNX25-207ENST00000618785 FANCAO15360 1455 aa11.13□□□□□ -0.63
SNX25-207ENST00000618785 MYO5CQ9NQX4 1742 aa11.12□□□□□ -0.63
SNX25-207ENST00000618785 LRRC9Q6ZRR7 1453 aa11.11□□□□□ -0.63
SNX25-207ENST00000618785 AKNAQ7Z591 1439 aa11.11□□□□□ -0.63
SNX25-207ENST00000618785 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
SNX25-207ENST00000618785 COL17A1Q9UMD9 1497 aaPredicted RBP11.1□□□□□ -0.63
SNX25-207ENST00000618785 ARHGAP5Q13017 1502 aa11.1□□□□□ -0.63
SNX25-207ENST00000618785 PREX2Q70Z35 1606 aa11.08□□□□□ -0.63
SNX25-207ENST00000618785 SUPT6HQ7KZ85 1726 aaKnown RBP11.08□□□□□ -0.64
SNX25-207ENST00000618785 GPATCH8Q9UKJ3 1502 aaKnown RBP11.08□□□□□ -0.64
SNX25-207ENST00000618785 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
SNX25-207ENST00000618785 DENND4BO75064 1496 aaPredicted RBP11.08□□□□□ -0.64
SNX25-207ENST00000618785 NCOA2Q15596 1464 aa11.08□□□□□ -0.64
SNX25-207ENST00000618785 CFDP1Q9UEE9 299 aaPredicted RBP11.07□□□□□ -0.64
SNX25-207ENST00000618785 SCAPERQ9BY12 1400 aa11.06□□□□□ -0.64
SNX25-207ENST00000618785 CDC42BPAQ5VT25 1732 aa11.06□□□□□ -0.64
SNX25-207ENST00000618785 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
SNX25-207ENST00000618785 RAPGEF3O95398 923 aa11.05□□□□□ -0.64
SNX25-207ENST00000618785 ZNF777Q9ULD5 760 aaPredicted RBP11.05□□□□□ -0.64
SNX25-207ENST00000618785 ITSN2Q9NZM3 1697 aa11.05□□□□□ -0.64
SNX25-207ENST00000618785 PLEKHH2Q8IVE3 1493 aa11.04□□□□□ -0.64
SNX25-207ENST00000618785 POGZQ7Z3K3 1410 aa11.03□□□□□ -0.64
SNX25-207ENST00000618785 ABCC1P33527 1531 aa11.02□□□□□ -0.64
SNX25-207ENST00000618785 FRMPD1Q5SYB0 1578 aa11.01□□□□□ -0.65
SNX25-207ENST00000618785 KIAA1107Q9UPP5 1409 aa11.01□□□□□ -0.65
SNX25-207ENST00000618785 ZNF518AQ6AHZ1 1483 aa11.01□□□□□ -0.65
SNX25-207ENST00000618785 RICTORQ6R327 1708 aa11.01□□□□□ -0.65
SNX25-207ENST00000618785 SAMD9LQ8IVG5 1584 aa11.01□□□□□ -0.65
SNX25-207ENST00000618785 MYOM3Q5VTT5 1437 aa11□□□□□ -0.65
SNX25-207ENST00000618785 ZMYM4Q5VZL5 1548 aa11□□□□□ -0.65
SNX25-207ENST00000618785 MAGI2Q86UL8 1455 aa11□□□□□ -0.65
SNX25-207ENST00000618785 MIA2Q96PC5 1412 aa10.99□□□□□ -0.65
SNX25-207ENST00000618785 PTPRMP28827 1452 aa10.99□□□□□ -0.65
SNX25-207ENST00000618785 ARHGEF12Q9NZN5 1544 aa10.99□□□□□ -0.65
SNX25-207ENST00000618785 HNRNPMP52272 730 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■■□ 20
SNX25-207ENST00000618785 AFAP1Q8N556 730 aa10.98□□□□□ -0.65
SNX25-207ENST00000618785 SYCP2Q9BX26 1530 aa10.98□□□□□ -0.65
SNX25-207ENST00000618785 TRAPPC8Q9Y2L5 1435 aa10.98□□□□□ -0.65
SNX25-207ENST00000618785 MYT1LQ9UL68 1186 aa10.98□□□□□ -0.65
SNX25-207ENST00000618785 ZNF644Q9H582 1327 aaPredicted RBP10.97□□□□□ -0.65
SNX25-207ENST00000618785 KDM5CP41229 1560 aa10.97□□□□□ -0.65
SNX25-207ENST00000618785 CAMSAP2Q08AD1 1489 aa10.97□□□□□ -0.65
SNX25-207ENST00000618785 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
SNX25-207ENST00000618785 ZFYVE16Q7Z3T8 1539 aa10.97□□□□□ -0.65
SNX25-207ENST00000618785 ARHGEF40Q8TER5 1519 aa10.96□□□□□ -0.66
SNX25-207ENST00000618785 MLH3Q9UHC1 1453 aa10.96□□□□□ -0.66
SNX25-207ENST00000618785 SPAG9O60271 1321 aaKnown RBP10.95□□□□□ -0.66
SNX25-207ENST00000618785 MBD5Q9P267 1494 aa10.95□□□□□ -0.66
SNX25-207ENST00000618785 FGD6Q6ZV73 1430 aa10.94□□□□□ -0.66
SNX25-207ENST00000618785 YEATS2Q9ULM3 1422 aa10.94□□□□□ -0.66
SNX25-207ENST00000618785 CCDC141Q6ZP82 1450 aa10.93□□□□□ -0.66
SNX25-207ENST00000618785 IQSEC2Q5JU85 1478 aa10.93□□□□□ -0.66
SNX25-207ENST00000618785 ATP10AO60312 1499 aa10.93□□□□□ -0.66
SNX25-207ENST00000618785 ARHGEF5Q12774 1597 aa10.93□□□□□ -0.66
SNX25-207ENST00000618785 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
SNX25-207ENST00000618785 PPARGC1BQ86YN6 1023 aaKnown RBP10.92□□□□□ -0.66
SNX25-207ENST00000618785 TSPY4P0CV99 314 aa10.92□□□□□ -0.66
SNX25-207ENST00000618785 TSPY10P0CW01 314 aa10.92□□□□□ -0.66
SNX25-207ENST00000618785 PTPN23Q9H3S7 1636 aa10.92□□□□□ -0.66
SNX25-207ENST00000618785 C9orf84Q5VXU9 1444 aa10.92□□□□□ -0.66
SNX25-207ENST00000618785 TCOF1Q13428 1488 aaKnown RBP10.91□□□□□ -0.66
SNX25-207ENST00000618785 ARID4BQ4LE39 1312 aaPredicted RBP10.91□□□□□ -0.66
SNX25-207ENST00000618785 ATP7AQ04656 1500 aa10.9□□□□□ -0.66
SNX25-207ENST00000618785 RTEL1-TNFRSF6BF6WH68 1400 aa10.9□□□□□ -0.66
SNX25-207ENST00000618785 DIP2CQ9Y2E4 1556 aa10.9□□□□□ -0.67
SNX25-207ENST00000618785 KIDINS220Q9ULH0 1771 aa10.9□□□□□ -0.67
SNX25-207ENST00000618785 DMRT2Q9Y5R5 561 aa10.89□□□□□ -0.67
SNX25-207ENST00000618785 INO80Q9ULG1 1556 aaPredicted RBP10.89□□□□□ -0.67
SNX25-207ENST00000618785 ABCA6Q8N139 1617 aa10.88□□□□□ -0.67
SNX25-207ENST00000618785 FAM50AQ14320 339 aaKnown RBP10.88□□□□□ -0.67
SNX25-207ENST00000618785 REREQ9P2R6 1566 aa10.88□□□□□ -0.67
SNX25-207ENST00000618785 SLC24A1O60721 1099 aa10.88□□□□□ -0.67
SNX25-207ENST00000618785 MAST1Q9Y2H9 1570 aa10.86□□□□□ -0.67
SNX25-207ENST00000618785 ABCC5O15440 1437 aa10.86□□□□□ -0.67
SNX25-207ENST00000618785 DAPK1P53355 1430 aa10.86□□□□□ -0.67
SNX25-207ENST00000618785 A2MP01023 1474 aa10.86□□□□□ -0.67
SNX25-207ENST00000618785 SHANK2Q9UPX8 1470 aa10.86□□□□□ -0.67
SNX25-207ENST00000618785 AGLP35573 1532 aa10.85□□□□□ -0.67
SNX25-207ENST00000618785 DNMT1P26358 1616 aaKnown RBP10.85□□□□□ -0.67
SNX25-207ENST00000618785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.85□□□□□ -0.67
SNX25-207ENST00000618785 ADGBQ8N7X0 1667 aa10.84□□□□□ -0.67
SNX25-207ENST00000618785 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
SNX25-207ENST00000618785 DHX29Q7Z478 1369 aaKnown RBP10.84□□□□□ -0.67
SNX25-207ENST00000618785 MLECQ14165 292 aa10.83□□□□□ -0.68
SNX25-207ENST00000618785 RRBP1Q9P2E9 1410 aaKnown RBP10.83□□□□□ -0.68
SNX25-207ENST00000618785 CROCC2H7BZ55 1655 aa10.82□□□□□ -0.68
SNX25-207ENST00000618785 SIGLEC1Q9BZZ2 1709 aa10.82□□□□□ -0.68
SNX25-207ENST00000618785 PLXNC1O60486 1568 aa10.82□□□□□ -0.68
SNX25-207ENST00000618785 ANKRD30AQ9BXX3 1397 aa10.81□□□□□ -0.68
SNX25-207ENST00000618785 CHIC2Q9UKJ5 165 aa10.8□□□□□ -0.68
SNX25-207ENST00000618785 KIF15Q9NS87 1388 aa10.8□□□□□ -0.68
SNX25-207ENST00000618785 ESF1Q9H501 851 aaKnown RBP10.8□□□□□ -0.68
SNX25-207ENST00000618785 ADGRL2O95490 1459 aa10.79□□□□□ -0.68
SNX25-207ENST00000618785 DUOX2Q9NRD8 1548 aa10.79□□□□□ -0.68
SNX25-207ENST00000618785 RRP7BPQ9NSQ0 103 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms