RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 SUPT6HQ7KZ85 1726 aaKnown RBP24.59■■□□□ 1.53
RPP40-207ENST00000618533 LRRC9Q6ZRR7 1453 aa24.58■■□□□ 1.52
RPP40-207ENST00000618533 APLP2Q06481 763 aa24.57■■□□□ 1.52
RPP40-207ENST00000618533 DENND4BO75064 1496 aaPredicted RBP24.55■■□□□ 1.52
RPP40-207ENST00000618533 ADGRL1O94910 1474 aa24.55■■□□□ 1.52
RPP40-207ENST00000618533 ITSN2Q9NZM3 1697 aa24.55■■□□□ 1.52
RPP40-207ENST00000618533 GPATCH8Q9UKJ3 1502 aaKnown RBP24.54■■□□□ 1.52
RPP40-207ENST00000618533 CCNB3Q8WWL7 1395 aa24.54■■□□□ 1.52
RPP40-207ENST00000618533 RICTORQ6R327 1708 aa24.53■■□□□ 1.52
RPP40-207ENST00000618533 FRMPD1Q5SYB0 1578 aa24.51■■□□□ 1.51
RPP40-207ENST00000618533 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
RPP40-207ENST00000618533 SCAPERQ9BY12 1400 aa24.49■■□□□ 1.51
RPP40-207ENST00000618533 ZMYM4Q5VZL5 1548 aa24.47■■□□□ 1.51
RPP40-207ENST00000618533 POGZQ7Z3K3 1410 aa24.47■■□□□ 1.51
RPP40-207ENST00000618533 ABCC1P33527 1531 aa24.46■■□□□ 1.51
RPP40-207ENST00000618533 RAPGEF3O95398 923 aa24.45■■□□□ 1.5
RPP40-207ENST00000618533 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.5
RPP40-207ENST00000618533 CFDP1Q9UEE9 299 aaPredicted RBP24.44■■□□□ 1.5
RPP40-207ENST00000618533 ZNF518AQ6AHZ1 1483 aa24.44■■□□□ 1.5
RPP40-207ENST00000618533 SAMD9LQ8IVG5 1584 aa24.43■■□□□ 1.5
RPP40-207ENST00000618533 KANK4Q5T7N3 995 aaPredicted RBP24.43■■□□□ 1.5
RPP40-207ENST00000618533 MAGI2Q86UL8 1455 aa24.43■■□□□ 1.5
RPP40-207ENST00000618533 KIAA1107Q9UPP5 1409 aa24.41■■□□□ 1.5
RPP40-207ENST00000618533 KDM5CP41229 1560 aa24.4■■□□□ 1.5
RPP40-207ENST00000618533 ARHGEF40Q8TER5 1519 aa24.38■■□□□ 1.49
RPP40-207ENST00000618533 ZNF777Q9ULD5 760 aaPredicted RBP24.36■■□□□ 1.49
RPP40-207ENST00000618533 ARHGEF12Q9NZN5 1544 aa24.35■■□□□ 1.49
RPP40-207ENST00000618533 ZFYVE16Q7Z3T8 1539 aa24.35■■□□□ 1.49
RPP40-207ENST00000618533 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
RPP40-207ENST00000618533 MYOM3Q5VTT5 1437 aa24.34■■□□□ 1.49
RPP40-207ENST00000618533 HECW2Q9P2P5 1572 aa24.33■■□□□ 1.49
RPP40-207ENST00000618533 MIA2Q96PC5 1412 aa24.33■■□□□ 1.49
RPP40-207ENST00000618533 MLH3Q9UHC1 1453 aa24.32■■□□□ 1.48
RPP40-207ENST00000618533 TRAPPC8Q9Y2L5 1435 aa24.31■■□□□ 1.48
RPP40-207ENST00000618533 AFAP1Q8N556 730 aa24.29■■□□□ 1.48
RPP40-207ENST00000618533 CAMSAP2Q08AD1 1489 aa24.29■■□□□ 1.48
RPP40-207ENST00000618533 RSPH4AQ5TD94 716 aa24.26■■□□□ 1.47
RPP40-207ENST00000618533 YEATS2Q9ULM3 1422 aa24.26■■□□□ 1.47
RPP40-207ENST00000618533 MBD5Q9P267 1494 aa24.26■■□□□ 1.47
RPP40-207ENST00000618533 HNRNPMP52272 730 aaKnown RBP eCLIP24.25■■□□□ 1.47
RPP40-207ENST00000618533 ARHGEF5Q12774 1597 aa24.25■■□□□ 1.47
RPP40-207ENST00000618533 ZNF644Q9H582 1327 aaPredicted RBP24.24■■□□□ 1.47
RPP40-207ENST00000618533 ATP10AO60312 1499 aa24.24■■□□□ 1.47
RPP40-207ENST00000618533 KIDINS220Q9ULH0 1771 aa24.24■■□□□ 1.47
RPP40-207ENST00000618533 REREQ9P2R6 1566 aa24.22■■□□□ 1.47
RPP40-207ENST00000618533 C9orf84Q5VXU9 1444 aa24.22■■□□□ 1.47
RPP40-207ENST00000618533 INO80Q9ULG1 1556 aaPredicted RBP24.21■■□□□ 1.47
RPP40-207ENST00000618533 DIP2CQ9Y2E4 1556 aa24.21■■□□□ 1.47
RPP40-207ENST00000618533 CCDC141Q6ZP82 1450 aa24.21■■□□□ 1.47
RPP40-207ENST00000618533 SPAG9O60271 1321 aaKnown RBP24.2■■□□□ 1.46
RPP40-207ENST00000618533 ABCA6Q8N139 1617 aa24.2■■□□□ 1.46
RPP40-207ENST00000618533 ATP7AQ04656 1500 aa24.2■■□□□ 1.46
RPP40-207ENST00000618533 FGD6Q6ZV73 1430 aa24.19■■□□□ 1.46
RPP40-207ENST00000618533 MYT1LQ9UL68 1186 aa24.19■■□□□ 1.46
RPP40-207ENST00000618533 PTPN23Q9H3S7 1636 aa24.19■■□□□ 1.46
RPP40-207ENST00000618533 RTEL1-TNFRSF6BF6WH68 1400 aa24.18■■□□□ 1.46
RPP40-207ENST00000618533 TCOF1Q13428 1488 aaKnown RBP24.16■■□□□ 1.46
RPP40-207ENST00000618533 BCORL1Q5H9F3 1711 aa24.15■■□□□ 1.46
RPP40-207ENST00000618533 KDM4FA0A1W2PPD8 638 aa24.13■■□□□ 1.45
RPP40-207ENST00000618533 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
RPP40-207ENST00000618533 ADGBQ8N7X0 1667 aa24.13■■□□□ 1.45
RPP40-207ENST00000618533 ARID4BQ4LE39 1312 aaPredicted RBP24.12■■□□□ 1.45
RPP40-207ENST00000618533 MAST1Q9Y2H9 1570 aa24.12■■□□□ 1.45
RPP40-207ENST00000618533 AGLP35573 1532 aa24.11■■□□□ 1.45
RPP40-207ENST00000618533 SIGLEC1Q9BZZ2 1709 aa24.11■■□□□ 1.45
RPP40-207ENST00000618533 ADAMTSL3P82987 1691 aa24.11■■□□□ 1.45
RPP40-207ENST00000618533 TSPY4P0CV99 314 aa24.1■■□□□ 1.45
RPP40-207ENST00000618533 TSPY10P0CW01 314 aa24.1■■□□□ 1.45
RPP40-207ENST00000618533 DNMT1P26358 1616 aaKnown RBP24.08■■□□□ 1.45
RPP40-207ENST00000618533 CROCC2H7BZ55 1655 aa24.08■■□□□ 1.44
RPP40-207ENST00000618533 SHANK2Q9UPX8 1470 aa24.07■■□□□ 1.44
RPP40-207ENST00000618533 PLXNC1O60486 1568 aa24.06■■□□□ 1.44
RPP40-207ENST00000618533 A2MP01023 1474 aa24.05■■□□□ 1.44
RPP40-207ENST00000618533 ABCC5O15440 1437 aa24.01■■□□□ 1.43
RPP40-207ENST00000618533 DAPK1P53355 1430 aa24.01■■□□□ 1.43
RPP40-207ENST00000618533 MADDQ8WXG6 1647 aa24.01■■□□□ 1.43
RPP40-207ENST00000618533 FER1L4A9Z1Z3 1794 aa23.99■■□□□ 1.43
RPP40-207ENST00000618533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.99■■□□□ 1.431e-7■■■■■ 124.2
RPP40-207ENST00000618533 DHX29Q7Z478 1369 aaKnown RBP23.98■■□□□ 1.43
RPP40-207ENST00000618533 PPARGC1BQ86YN6 1023 aaKnown RBP23.97■■□□□ 1.43
RPP40-207ENST00000618533 FAM50AQ14320 339 aaKnown RBP23.96■■□□□ 1.43
RPP40-207ENST00000618533 RIMS1Q86UR5 1692 aaKnown RBP23.95■■□□□ 1.42
RPP40-207ENST00000618533 MLECQ14165 292 aa23.93■■□□□ 1.42
RPP40-207ENST00000618533 PTPRMP28827 1452 aa23.93■■□□□ 1.42
RPP40-207ENST00000618533 RRBP1Q9P2E9 1410 aaKnown RBP23.93■■□□□ 1.42
RPP40-207ENST00000618533 DUOX2Q9NRD8 1548 aa23.92■■□□□ 1.42
RPP40-207ENST00000618533 EIF2AK4Q9P2K8 1649 aaKnown RBP23.92■■□□□ 1.42
RPP40-207ENST00000618533 ADGRL2O95490 1459 aa23.9■■□□□ 1.42
RPP40-207ENST00000618533 ANKRD30AQ9BXX3 1397 aa23.9■■□□□ 1.42
RPP40-207ENST00000618533 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.41
RPP40-207ENST00000618533 CNTLNQ9NXG0 1405 aa23.89■■□□□ 1.41
RPP40-207ENST00000618533 FAM135AQ9P2D6 1515 aa23.89■■□□□ 1.41
RPP40-207ENST00000618533 KIF15Q9NS87 1388 aa23.87■■□□□ 1.41
RPP40-207ENST00000618533 ESF1Q9H501 851 aaKnown RBP23.86■■□□□ 1.41
RPP40-207ENST00000618533 MROH2AA6NES4 1674 aa23.86■■□□□ 1.41
RPP40-207ENST00000618533 NCOA1Q15788 1441 aa23.85■■□□□ 1.41
RPP40-207ENST00000618533 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
RPP40-207ENST00000618533 RNF17Q9BXT8 1623 aaKnown RBP23.84■■□□□ 1.41
RPP40-207ENST00000618533 KIF3BO15066 747 aa23.83■■□□□ 1.41
RPP40-207ENST00000618533 ROCK1Q13464 1354 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms