RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 MYO5CQ9NQX4 1742 aa35.66■■■■□ 3.3
SYNGR3-206ENST00000618464 ILDR1Q86SU0 546 aaPredicted RBP35.64■■■■□ 3.3
SYNGR3-206ENST00000618464 MADDQ8WXG6 1647 aa35.61■■■■□ 3.29
SYNGR3-206ENST00000618464 ZMYM4Q5VZL5 1548 aa35.61■■■■□ 3.29
SYNGR3-206ENST00000618464 SCAPERQ9BY12 1400 aa35.59■■■■□ 3.29
SYNGR3-206ENST00000618464 YEATS2Q9ULM3 1422 aa35.59■■■■□ 3.29
SYNGR3-206ENST00000618464 EFCAB2Q5VUJ9 269 aa35.57■■■■□ 3.28
SYNGR3-206ENST00000618464 ZFYVE16Q7Z3T8 1539 aa35.56■■■■□ 3.28
SYNGR3-206ENST00000618464 CEP162Q5TB80 1403 aa35.56■■■■□ 3.28
SYNGR3-206ENST00000618464 ARHGAP5Q13017 1502 aa35.55■■■■□ 3.28
SYNGR3-206ENST00000618464 POGZQ7Z3K3 1410 aa35.53■■■■□ 3.28
SYNGR3-206ENST00000618464 MAGI2Q86UL8 1455 aa35.52■■■■□ 3.28
SYNGR3-206ENST00000618464 SIGLEC1Q9BZZ2 1709 aa35.52■■■■□ 3.28
SYNGR3-206ENST00000618464 RIMS1Q86UR5 1692 aaKnown RBP35.48■■■■□ 3.27
SYNGR3-206ENST00000618464 LOC105371045A0A1W2PR82 267 aa35.47■■■■□ 3.27
SYNGR3-206ENST00000618464 CDC42BPBQ9Y5S2 1711 aa35.44■■■■□ 3.26
SYNGR3-206ENST00000618464 PREX2Q70Z35 1606 aa35.43■■■■□ 3.26
SYNGR3-206ENST00000618464 MLECQ14165 292 aa35.4■■■■□ 3.26
SYNGR3-206ENST00000618464 PLPPR3Q6T4P5 718 aa35.37■■■■□ 3.25
SYNGR3-206ENST00000618464 ATP10AO60312 1499 aa35.36■■■■□ 3.25
SYNGR3-206ENST00000618464 LMTK3Q96Q04 1460 aa35.36■■■■□ 3.25
SYNGR3-206ENST00000618464 CDC42BPAQ5VT25 1732 aa35.36■■■■□ 3.25
SYNGR3-206ENST00000618464 AFAP1Q8N556 730 aa35.35■■■■□ 3.25
SYNGR3-206ENST00000618464 ZNF518AQ6AHZ1 1483 aa35.35■■■■□ 3.25
SYNGR3-206ENST00000618464 MTUS2Q5JR59 1369 aa35.33■■■■□ 3.25
SYNGR3-206ENST00000618464 C9orf84Q5VXU9 1444 aa35.31■■■■□ 3.24
SYNGR3-206ENST00000618464 ABCC1P33527 1531 aa35.29■■■■□ 3.24
SYNGR3-206ENST00000618464 KDM5CP41229 1560 aa35.28■■■■□ 3.24
SYNGR3-206ENST00000618464 MYT1LQ9UL68 1186 aa35.27■■■■□ 3.24
SYNGR3-206ENST00000618464 ARHGEF12Q9NZN5 1544 aa35.27■■■■□ 3.24
SYNGR3-206ENST00000618464 FER1L4A9Z1Z3 1794 aa35.26■■■■□ 3.24
SYNGR3-206ENST00000618464 ZNF777Q9ULD5 760 aaPredicted RBP35.26■■■■□ 3.24
SYNGR3-206ENST00000618464 GPATCH8Q9UKJ3 1502 aaKnown RBP35.26■■■■□ 3.23
SYNGR3-206ENST00000618464 ITSN2Q9NZM3 1697 aa35.24■■■■□ 3.23
SYNGR3-206ENST00000618464 TRAPPC8Q9Y2L5 1435 aa35.23■■■■□ 3.23
SYNGR3-206ENST00000618464 HSPA2P54652 639 aa35.22■■■■□ 3.23
SYNGR3-206ENST00000618464 CCNB3Q8WWL7 1395 aa35.21■■■■□ 3.23
SYNGR3-206ENST00000618464 EHBP1L1Q8N3D4 1523 aa35.21■■■■□ 3.23
SYNGR3-206ENST00000618464 SAMD9LQ8IVG5 1584 aa35.19■■■■□ 3.22
SYNGR3-206ENST00000618464 DIP2CQ9Y2E4 1556 aa35.17■■■■□ 3.22
SYNGR3-206ENST00000618464 CFDP1Q9UEE9 299 aaPredicted RBP35.16■■■■□ 3.22
SYNGR3-206ENST00000618464 MLH3Q9UHC1 1453 aa35.15■■■■□ 3.22
SYNGR3-206ENST00000618464 SYCP2Q9BX26 1530 aa35.14■■■■□ 3.22
SYNGR3-206ENST00000618464 VPS8Q8N3P4 1428 aa35.14■■■■□ 3.22
SYNGR3-206ENST00000618464 CEBPAP49715 358 aaPredicted RBP35.12■■■■□ 3.21
SYNGR3-206ENST00000618464 ABCA6Q8N139 1617 aa35.12■■■■□ 3.21
SYNGR3-206ENST00000618464 TIAM1Q13009 1591 aa35.11■■■■□ 3.21
SYNGR3-206ENST00000618464 HNRNPMP52272 730 aaKnown RBP eCLIP35.1■■■■□ 3.21
SYNGR3-206ENST00000618464 REREQ9P2R6 1566 aa35.08■■■■□ 3.21
SYNGR3-206ENST00000618464 FBXO41Q8TF61 875 aa35.06■■■■□ 3.2
SYNGR3-206ENST00000618464 KIDINS220Q9ULH0 1771 aa35.05■■■■□ 3.2
SYNGR3-206ENST00000618464 PLEKHH2Q8IVE3 1493 aa35.03■■■■□ 3.2
SYNGR3-206ENST00000618464 KIAA1107Q9UPP5 1409 aa35.01■■■■□ 3.2
SYNGR3-206ENST00000618464 SUPT6HQ7KZ85 1726 aaKnown RBP35.01■■■■□ 3.19
SYNGR3-206ENST00000618464 NCOA2Q15596 1464 aa35■■■■□ 3.19
SYNGR3-206ENST00000618464 SPAG9O60271 1321 aaKnown RBP35■■■■□ 3.19
SYNGR3-206ENST00000618464 ZNF644Q9H582 1327 aaPredicted RBP35■■■■□ 3.19
SYNGR3-206ENST00000618464 AGLP35573 1532 aa34.98■■■■□ 3.19
SYNGR3-206ENST00000618464 PREX1Q8TCU6 1659 aa34.97■■■■□ 3.19
SYNGR3-206ENST00000618464 LRRC9Q6ZRR7 1453 aa34.93■■■■□ 3.18
SYNGR3-206ENST00000618464 ATP7AQ04656 1500 aa34.91■■■■□ 3.18
SYNGR3-206ENST00000618464 INO80Q9ULG1 1556 aaPredicted RBP34.89■■■■□ 3.18
SYNGR3-206ENST00000618464 C3P01024 1663 aa34.88■■■■□ 3.17
SYNGR3-206ENST00000618464 ESF1Q9H501 851 aaKnown RBP34.87■■■■□ 3.17
SYNGR3-206ENST00000618464 MBD5Q9P267 1494 aa34.86■■■■□ 3.17
SYNGR3-206ENST00000618464 KANK4Q5T7N3 995 aaPredicted RBP34.86■■■■□ 3.17
SYNGR3-206ENST00000618464 UHRF1BP1Q6BDS2 1440 aa34.85■■■■□ 3.17
SYNGR3-206ENST00000618464 MAP3K1Q13233 1512 aa34.84■■■■□ 3.17
SYNGR3-206ENST00000618464 SETD1BQ9UPS6 1966 aaKnown RBP34.83■■■■□ 3.17
SYNGR3-206ENST00000618464 CAMSAP2Q08AD1 1489 aa34.83■■■■□ 3.17
SYNGR3-206ENST00000618464 A2MP01023 1474 aa34.78■■■■□ 3.16
SYNGR3-206ENST00000618464 STRCQ7RTU9 1775 aa34.77■■■■□ 3.16
SYNGR3-206ENST00000618464 CNTLNQ9NXG0 1405 aa34.77■■■■□ 3.16
SYNGR3-206ENST00000618464 CERKQ8TCT0 537 aa34.75■■■■□ 3.15
SYNGR3-206ENST00000618464 PLXNC1O60486 1568 aa34.74■■■■□ 3.15
SYNGR3-206ENST00000618464 CCDC141Q6ZP82 1450 aa34.74■■■■□ 3.15
SYNGR3-206ENST00000618464 APLP2Q06481 763 aa34.73■■■■□ 3.15
SYNGR3-206ENST00000618464 ADGBQ8N7X0 1667 aa34.71■■■■□ 3.15
SYNGR3-206ENST00000618464 RTEL1-TNFRSF6BF6WH68 1400 aa34.7■■■■□ 3.15
SYNGR3-206ENST00000618464 DMRT2Q9Y5R5 561 aa34.69■■■■□ 3.14
SYNGR3-206ENST00000618464 ZMYM3Q14202 1370 aa34.67■■■■□ 3.14
SYNGR3-206ENST00000618464 MROH2AA6NES4 1674 aa34.66■■■■□ 3.14
SYNGR3-206ENST00000618464 MYOM3Q5VTT5 1437 aa34.64■■■■□ 3.14
SYNGR3-206ENST00000618464 RSPH4AQ5TD94 716 aa34.64■■■■□ 3.14
SYNGR3-206ENST00000618464 ARHGEF5Q12774 1597 aa34.64■■■■□ 3.14
SYNGR3-206ENST00000618464 GGT6Q6P531 493 aa34.63■■■■□ 3.13
SYNGR3-206ENST00000618464 CLTCQ00610 1675 aaKnown RBP34.61■■■■□ 3.13
SYNGR3-206ENST00000618464 NPATQ14207 1427 aa34.61■■■■□ 3.13
SYNGR3-206ENST00000618464 DHX29Q7Z478 1369 aaKnown RBP34.59■■■■□ 3.13
SYNGR3-206ENST00000618464 MIA2Q96PC5 1412 aa34.58■■■■□ 3.13
SYNGR3-206ENST00000618464 TSPY4P0CV99 314 aa34.58■■■■□ 3.13
SYNGR3-206ENST00000618464 TSPY10P0CW01 314 aa34.58■■■■□ 3.13
SYNGR3-206ENST00000618464 PTPRTO14522 1441 aa34.56■■■■□ 3.12
SYNGR3-206ENST00000618464 NCOA1Q15788 1441 aa34.53■■■■□ 3.12
SYNGR3-206ENST00000618464 KIF3BO15066 747 aa34.5■■■■□ 3.11
SYNGR3-206ENST00000618464 PTPRKQ15262 1439 aa34.49■■■■□ 3.11
SYNGR3-206ENST00000618464 PPP6R1Q9UPN7 881 aa34.49■■■■□ 3.11
SYNGR3-206ENST00000618464 CAMSAP1Q5T5Y3 1602 aa34.48■■■■□ 3.11
SYNGR3-206ENST00000618464 MAST1Q9Y2H9 1570 aa34.46■■■■□ 3.11
SYNGR3-206ENST00000618464 PTPN23Q9H3S7 1636 aa34.45■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms