RNA–Protein interactions for RNA: ENST00000618137.1

NLRC3-205, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 1 (best)

Gene NLRC3, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-205ENST00000618137 COL17A1Q9UMD9 1497 aaPredicted RBP19.03■□□□□ 0.64
NLRC3-205ENST00000618137 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
NLRC3-205ENST00000618137 GPATCH8Q9UKJ3 1502 aaKnown RBP19.01■□□□□ 0.63
NLRC3-205ENST00000618137 NCOA2Q15596 1464 aa19■□□□□ 0.63
NLRC3-205ENST00000618137 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
NLRC3-205ENST00000618137 CDC42BPAQ5VT25 1732 aa18.99■□□□□ 0.63
NLRC3-205ENST00000618137 ADGRL1O94910 1474 aa18.98■□□□□ 0.63
NLRC3-205ENST00000618137 CDC42BPBQ9Y5S2 1711 aa18.98■□□□□ 0.63
NLRC3-205ENST00000618137 DENND4BO75064 1496 aaPredicted RBP18.97■□□□□ 0.63
NLRC3-205ENST00000618137 ITSN2Q9NZM3 1697 aa18.96■□□□□ 0.63
NLRC3-205ENST00000618137 CFDP1Q9UEE9 299 aaPredicted RBP18.96■□□□□ 0.63
NLRC3-205ENST00000618137 SCAPERQ9BY12 1400 aa18.94■□□□□ 0.62
NLRC3-205ENST00000618137 POGZQ7Z3K3 1410 aa18.92■□□□□ 0.62
NLRC3-205ENST00000618137 PLEKHH2Q8IVE3 1493 aa18.92■□□□□ 0.62
NLRC3-205ENST00000618137 RAPGEF3O95398 923 aa18.92■□□□□ 0.62
NLRC3-205ENST00000618137 ABCC1P33527 1531 aa18.91■□□□□ 0.62
NLRC3-205ENST00000618137 FRMPD1Q5SYB0 1578 aa18.91■□□□□ 0.62
NLRC3-205ENST00000618137 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
NLRC3-205ENST00000618137 ZNF518AQ6AHZ1 1483 aa18.9■□□□□ 0.62
NLRC3-205ENST00000618137 RICTORQ6R327 1708 aa18.89■□□□□ 0.61
NLRC3-205ENST00000618137 ZMYM4Q5VZL5 1548 aa18.89■□□□□ 0.61
NLRC3-205ENST00000618137 SAMD9LQ8IVG5 1584 aa18.89■□□□□ 0.61
NLRC3-205ENST00000618137 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
NLRC3-205ENST00000618137 MYOM3Q5VTT5 1437 aa18.88■□□□□ 0.61
NLRC3-205ENST00000618137 MIA2Q96PC5 1412 aa18.88■□□□□ 0.61
NLRC3-205ENST00000618137 MAGI2Q86UL8 1455 aa18.88■□□□□ 0.61
NLRC3-205ENST00000618137 ARHGEF12Q9NZN5 1544 aa18.85■□□□□ 0.61
NLRC3-205ENST00000618137 KDM5CP41229 1560 aa18.85■□□□□ 0.61
NLRC3-205ENST00000618137 SYCP2Q9BX26 1530 aa18.84■□□□□ 0.61
NLRC3-205ENST00000618137 AFAP1Q8N556 730 aa18.82■□□□□ 0.6
NLRC3-205ENST00000618137 TRAPPC8Q9Y2L5 1435 aa18.82■□□□□ 0.6
NLRC3-205ENST00000618137 RSPH4AQ5TD94 716 aa18.81■□□□□ 0.6
NLRC3-205ENST00000618137 CAMSAP2Q08AD1 1489 aa18.81■□□□□ 0.6
NLRC3-205ENST00000618137 ARHGEF40Q8TER5 1519 aa18.8■□□□□ 0.6
NLRC3-205ENST00000618137 ZNF644Q9H582 1327 aaPredicted RBP18.8■□□□□ 0.6
NLRC3-205ENST00000618137 MLH3Q9UHC1 1453 aa18.8■□□□□ 0.6
NLRC3-205ENST00000618137 HNRNPMP52272 730 aaKnown RBP eCLIP18.8■□□□□ 0.6
NLRC3-205ENST00000618137 ZFYVE16Q7Z3T8 1539 aa18.79■□□□□ 0.6
NLRC3-205ENST00000618137 MBD5Q9P267 1494 aa18.79■□□□□ 0.6
NLRC3-205ENST00000618137 HECW2Q9P2P5 1572 aa18.78■□□□□ 0.6
NLRC3-205ENST00000618137 FGD6Q6ZV73 1430 aa18.78■□□□□ 0.6
NLRC3-205ENST00000618137 ARHGEF5Q12774 1597 aa18.76■□□□□ 0.59
NLRC3-205ENST00000618137 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
NLRC3-205ENST00000618137 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
NLRC3-205ENST00000618137 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
NLRC3-205ENST00000618137 TCOF1Q13428 1488 aaKnown RBP18.74■□□□□ 0.59
NLRC3-205ENST00000618137 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
NLRC3-205ENST00000618137 ATP10AO60312 1499 aa18.73■□□□□ 0.59
NLRC3-205ENST00000618137 MYT1LQ9UL68 1186 aa18.72■□□□□ 0.59
NLRC3-205ENST00000618137 RTEL1-TNFRSF6BF6WH68 1400 aa18.72■□□□□ 0.59
NLRC3-205ENST00000618137 C9orf84Q5VXU9 1444 aa18.71■□□□□ 0.59
NLRC3-205ENST00000618137 INO80Q9ULG1 1556 aaPredicted RBP18.71■□□□□ 0.59
NLRC3-205ENST00000618137 ATP7AQ04656 1500 aa18.7■□□□□ 0.58
NLRC3-205ENST00000618137 REREQ9P2R6 1566 aa18.69■□□□□ 0.58
NLRC3-205ENST00000618137 DIP2CQ9Y2E4 1556 aa18.69■□□□□ 0.58
NLRC3-205ENST00000618137 KIDINS220Q9ULH0 1771 aa18.69■□□□□ 0.58
NLRC3-205ENST00000618137 TSPY4P0CV99 314 aa18.69■□□□□ 0.58
NLRC3-205ENST00000618137 TSPY10P0CW01 314 aa18.69■□□□□ 0.58
NLRC3-205ENST00000618137 ABCA6Q8N139 1617 aa18.67■□□□□ 0.58
NLRC3-205ENST00000618137 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
NLRC3-205ENST00000618137 MAST1Q9Y2H9 1570 aa18.65■□□□□ 0.58
NLRC3-205ENST00000618137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.65■□□□□ 0.58
NLRC3-205ENST00000618137 SHANK2Q9UPX8 1470 aa18.65■□□□□ 0.58
NLRC3-205ENST00000618137 ARID4BQ4LE39 1312 aaPredicted RBP18.64■□□□□ 0.57
NLRC3-205ENST00000618137 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
NLRC3-205ENST00000618137 ABCC5O15440 1437 aa18.63■□□□□ 0.57
NLRC3-205ENST00000618137 DAPK1P53355 1430 aa18.63■□□□□ 0.57
NLRC3-205ENST00000618137 FAM50AQ14320 339 aaKnown RBP18.62■□□□□ 0.57
NLRC3-205ENST00000618137 AGLP35573 1532 aa18.62■□□□□ 0.57
NLRC3-205ENST00000618137 ADGBQ8N7X0 1667 aa18.6■□□□□ 0.57
NLRC3-205ENST00000618137 A2MP01023 1474 aa18.6■□□□□ 0.57
NLRC3-205ENST00000618137 RRBP1Q9P2E9 1410 aaKnown RBP18.6■□□□□ 0.57
NLRC3-205ENST00000618137 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
NLRC3-205ENST00000618137 PLXNC1O60486 1568 aa18.59■□□□□ 0.57
NLRC3-205ENST00000618137 KDM4FA0A1W2PPD8 638 aa18.59■□□□□ 0.57
NLRC3-205ENST00000618137 BCORL1Q5H9F3 1711 aa18.58■□□□□ 0.57
NLRC3-205ENST00000618137 SIGLEC1Q9BZZ2 1709 aa18.57■□□□□ 0.56
NLRC3-205ENST00000618137 DHX29Q7Z478 1369 aaKnown RBP18.57■□□□□ 0.56
NLRC3-205ENST00000618137 ADAMTSL3P82987 1691 aa18.55■□□□□ 0.56
NLRC3-205ENST00000618137 ANKRD30AQ9BXX3 1397 aa18.54■□□□□ 0.56
NLRC3-205ENST00000618137 ADGRL2O95490 1459 aa18.53■□□□□ 0.56
NLRC3-205ENST00000618137 DUOX2Q9NRD8 1548 aa18.52■□□□□ 0.56
NLRC3-205ENST00000618137 NCOA1Q15788 1441 aa18.51■□□□□ 0.55
NLRC3-205ENST00000618137 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
NLRC3-205ENST00000618137 MLECQ14165 292 aa18.5■□□□□ 0.55
NLRC3-205ENST00000618137 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
NLRC3-205ENST00000618137 ROCK1Q13464 1354 aa18.49■□□□□ 0.55
NLRC3-205ENST00000618137 ERBINQ96RT1 1412 aa18.49■□□□□ 0.55
NLRC3-205ENST00000618137 CHIC2Q9UKJ5 165 aa18.48■□□□□ 0.55
NLRC3-205ENST00000618137 MADDQ8WXG6 1647 aa18.48■□□□□ 0.55
NLRC3-205ENST00000618137 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
NLRC3-205ENST00000618137 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
NLRC3-205ENST00000618137 RRP7BPQ9NSQ0 103 aa18.47■□□□□ 0.55
NLRC3-205ENST00000618137 PTPRKQ15262 1439 aa18.47■□□□□ 0.55
NLRC3-205ENST00000618137 KIF3BO15066 747 aa18.46■□□□□ 0.55
NLRC3-205ENST00000618137 CNTLNQ9NXG0 1405 aa18.46■□□□□ 0.55
NLRC3-205ENST00000618137 FAM135AQ9P2D6 1515 aa18.45■□□□□ 0.54
NLRC3-205ENST00000618137 ESF1Q9H501 851 aaKnown RBP18.45■□□□□ 0.54
NLRC3-205ENST00000618137 PTPRMP28827 1452 aa18.45■□□□□ 0.54
NLRC3-205ENST00000618137 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms