RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 CDC42BPAQ5VT25 1732 aa25.67■■□□□ 1.7
AP3S2-216ENST00000617003 LRRC9Q6ZRR7 1453 aa25.67■■□□□ 1.7
AP3S2-216ENST00000617003 ARHGAP5Q13017 1502 aa25.66■■□□□ 1.7
AP3S2-216ENST00000617003 GPATCH8Q9UKJ3 1502 aaKnown RBP25.64■■□□□ 1.7
AP3S2-216ENST00000617003 PREX2Q70Z35 1606 aa25.64■■□□□ 1.69
AP3S2-216ENST00000617003 CCNB3Q8WWL7 1395 aa25.63■■□□□ 1.69
AP3S2-216ENST00000617003 ADGRL1O94910 1474 aa25.61■■□□□ 1.69
AP3S2-216ENST00000617003 SUPT6HQ7KZ85 1726 aaKnown RBP25.61■■□□□ 1.69
AP3S2-216ENST00000617003 SCAPERQ9BY12 1400 aa25.6■■□□□ 1.69
AP3S2-216ENST00000617003 DENND4BO75064 1496 aaPredicted RBP25.6■■□□□ 1.69
AP3S2-216ENST00000617003 NCOA2Q15596 1464 aa25.59■■□□□ 1.69
AP3S2-216ENST00000617003 ZNF777Q9ULD5 760 aaPredicted RBP25.59■■□□□ 1.69
AP3S2-216ENST00000617003 CFDP1Q9UEE9 299 aaPredicted RBP25.58■■□□□ 1.69
AP3S2-216ENST00000617003 RICTORQ6R327 1708 aa25.55■■□□□ 1.68
AP3S2-216ENST00000617003 FRMPD1Q5SYB0 1578 aa25.54■■□□□ 1.68
AP3S2-216ENST00000617003 ITSN2Q9NZM3 1697 aa25.5■■□□□ 1.67
AP3S2-216ENST00000617003 ARHGEF12Q9NZN5 1544 aa25.5■■□□□ 1.67
AP3S2-216ENST00000617003 SAMD9LQ8IVG5 1584 aa25.49■■□□□ 1.67
AP3S2-216ENST00000617003 AFAP1Q8N556 730 aa25.49■■□□□ 1.67
AP3S2-216ENST00000617003 POGZQ7Z3K3 1410 aa25.49■■□□□ 1.67
AP3S2-216ENST00000617003 ZNF644Q9H582 1327 aaPredicted RBP25.48■■□□□ 1.67
AP3S2-216ENST00000617003 HNRNPMP52272 730 aaKnown RBP eCLIP25.48■■□□□ 1.67
AP3S2-216ENST00000617003 ABCC1P33527 1531 aa25.48■■□□□ 1.67
AP3S2-216ENST00000617003 TRAPPC8Q9Y2L5 1435 aa25.45■■□□□ 1.67
AP3S2-216ENST00000617003 ZNF518AQ6AHZ1 1483 aa25.43■■□□□ 1.66
AP3S2-216ENST00000617003 ZMYM4Q5VZL5 1548 aa25.42■■□□□ 1.66
AP3S2-216ENST00000617003 KIAA1107Q9UPP5 1409 aa25.41■■□□□ 1.66
AP3S2-216ENST00000617003 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
AP3S2-216ENST00000617003 SYCP2Q9BX26 1530 aa25.41■■□□□ 1.66
AP3S2-216ENST00000617003 MYT1LQ9UL68 1186 aa25.39■■□□□ 1.66
AP3S2-216ENST00000617003 MAGI2Q86UL8 1455 aa25.39■■□□□ 1.65
AP3S2-216ENST00000617003 MYOM3Q5VTT5 1437 aa25.39■■□□□ 1.65
AP3S2-216ENST00000617003 PPARGC1BQ86YN6 1023 aaKnown RBP25.39■■□□□ 1.65
AP3S2-216ENST00000617003 YEATS2Q9ULM3 1422 aa25.38■■□□□ 1.65
AP3S2-216ENST00000617003 KDM5CP41229 1560 aa25.37■■□□□ 1.65
AP3S2-216ENST00000617003 ZFYVE16Q7Z3T8 1539 aa25.36■■□□□ 1.65
AP3S2-216ENST00000617003 CAMSAP2Q08AD1 1489 aa25.35■■□□□ 1.65
AP3S2-216ENST00000617003 MIA2Q96PC5 1412 aa25.34■■□□□ 1.65
AP3S2-216ENST00000617003 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
AP3S2-216ENST00000617003 ARHGEF40Q8TER5 1519 aa25.33■■□□□ 1.65
AP3S2-216ENST00000617003 MLH3Q9UHC1 1453 aa25.32■■□□□ 1.64
AP3S2-216ENST00000617003 SPAG9O60271 1321 aaKnown RBP25.32■■□□□ 1.64
AP3S2-216ENST00000617003 HECW2Q9P2P5 1572 aa25.31■■□□□ 1.64
AP3S2-216ENST00000617003 KDM4FA0A1W2PPD8 638 aa25.31■■□□□ 1.64
AP3S2-216ENST00000617003 RSPH4AQ5TD94 716 aa25.29■■□□□ 1.64
AP3S2-216ENST00000617003 ARID4BQ4LE39 1312 aaPredicted RBP25.29■■□□□ 1.64
AP3S2-216ENST00000617003 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
AP3S2-216ENST00000617003 ATP10AO60312 1499 aa25.28■■□□□ 1.64
AP3S2-216ENST00000617003 FGD6Q6ZV73 1430 aa25.26■■□□□ 1.63
AP3S2-216ENST00000617003 PTPN23Q9H3S7 1636 aa25.24■■□□□ 1.63
AP3S2-216ENST00000617003 CCDC141Q6ZP82 1450 aa25.23■■□□□ 1.63
AP3S2-216ENST00000617003 DIP2CQ9Y2E4 1556 aa25.23■■□□□ 1.63
AP3S2-216ENST00000617003 ABCA6Q8N139 1617 aa25.23■■□□□ 1.63
AP3S2-216ENST00000617003 C9orf84Q5VXU9 1444 aa25.22■■□□□ 1.63
AP3S2-216ENST00000617003 SIGLEC1Q9BZZ2 1709 aa25.22■■□□□ 1.63
AP3S2-216ENST00000617003 ARHGEF5Q12774 1597 aa25.22■■□□□ 1.63
AP3S2-216ENST00000617003 TSPY4P0CV99 314 aa25.22■■□□□ 1.63
AP3S2-216ENST00000617003 TSPY10P0CW01 314 aa25.22■■□□□ 1.63
AP3S2-216ENST00000617003 ATP7AQ04656 1500 aa25.2■■□□□ 1.63
AP3S2-216ENST00000617003 INO80Q9ULG1 1556 aaPredicted RBP25.19■■□□□ 1.62
AP3S2-216ENST00000617003 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
AP3S2-216ENST00000617003 RTEL1-TNFRSF6BF6WH68 1400 aa25.18■■□□□ 1.62
AP3S2-216ENST00000617003 MLECQ14165 292 aa25.16■■□□□ 1.62
AP3S2-216ENST00000617003 FAM50AQ14320 339 aaKnown RBP25.16■■□□□ 1.62
AP3S2-216ENST00000617003 AEBP2Q6ZN18 517 aaPredicted RBP25.16■■□□□ 1.62
AP3S2-216ENST00000617003 BCORL1Q5H9F3 1711 aa25.15■■□□□ 1.62
AP3S2-216ENST00000617003 REREQ9P2R6 1566 aa25.13■■□□□ 1.61
AP3S2-216ENST00000617003 ABCC5O15440 1437 aa25.12■■□□□ 1.61
AP3S2-216ENST00000617003 ADAMTSL3P82987 1691 aa25.11■■□□□ 1.61
AP3S2-216ENST00000617003 A2MP01023 1474 aa25.09■■□□□ 1.61
AP3S2-216ENST00000617003 ADGBQ8N7X0 1667 aa25.09■■□□□ 1.61
AP3S2-216ENST00000617003 DAPK1P53355 1430 aa25.08■■□□□ 1.61
AP3S2-216ENST00000617003 MAST1Q9Y2H9 1570 aa25.08■■□□□ 1.61
AP3S2-216ENST00000617003 DNMT1P26358 1616 aaKnown RBP25.08■■□□□ 1.6
AP3S2-216ENST00000617003 AGLP35573 1532 aa25.08■■□□□ 1.6
AP3S2-216ENST00000617003 DHX29Q7Z478 1369 aaKnown RBP25.06■■□□□ 1.6
AP3S2-216ENST00000617003 CHIC2Q9UKJ5 165 aa25.05■■□□□ 1.6
AP3S2-216ENST00000617003 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
AP3S2-216ENST00000617003 MADDQ8WXG6 1647 aa25.03■■□□□ 1.6
AP3S2-216ENST00000617003 PLXNC1O60486 1568 aa25.03■■□□□ 1.6
AP3S2-216ENST00000617003 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
AP3S2-216ENST00000617003 RRP7BPQ9NSQ0 103 aa25■■□□□ 1.59
AP3S2-216ENST00000617003 GGT6Q6P531 493 aa24.98■■□□□ 1.59
AP3S2-216ENST00000617003 RIMS1Q86UR5 1692 aaKnown RBP24.98■■□□□ 1.59
AP3S2-216ENST00000617003 FER1L4A9Z1Z3 1794 aa24.98■■□□□ 1.59
AP3S2-216ENST00000617003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.97■■□□□ 1.59
AP3S2-216ENST00000617003 KIF3BO15066 747 aa24.97■■□□□ 1.59
AP3S2-216ENST00000617003 PTPRMP28827 1452 aa24.97■■□□□ 1.59
AP3S2-216ENST00000617003 ITGAEP38570 1179 aa24.97■■□□□ 1.59
AP3S2-216ENST00000617003 RRBP1Q9P2E9 1410 aaKnown RBP24.96■■□□□ 1.59
AP3S2-216ENST00000617003 PTPRKQ15262 1439 aa24.95■■□□□ 1.59
AP3S2-216ENST00000617003 ANKRD30AQ9BXX3 1397 aa24.94■■□□□ 1.58
AP3S2-216ENST00000617003 KIF15Q9NS87 1388 aa24.94■■□□□ 1.58
AP3S2-216ENST00000617003 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
AP3S2-216ENST00000617003 ESF1Q9H501 851 aaKnown RBP24.93■■□□□ 1.58
AP3S2-216ENST00000617003 NCOA1Q15788 1441 aa24.92■■□□□ 1.58
AP3S2-216ENST00000617003 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
AP3S2-216ENST00000617003 ADGRL2O95490 1459 aa24.89■■□□□ 1.58
AP3S2-216ENST00000617003 CEBPAP49715 358 aaPredicted RBP24.88■■□□□ 1.57
AP3S2-216ENST00000617003 PPP6R1Q9UPN7 881 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms