RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 PNNQ9H307 717 aaKnown RBP24.04■■□□□ 1.44
CDH23-212ENST00000616684 LMOD2Q6P5Q4 547 aa24.03■■□□□ 1.44
CDH23-212ENST00000616684 GLIPR1L2Q4G1C9 344 aa24.03■■□□□ 1.44
CDH23-212ENST00000616684 HAP1P54257 671 aaPredicted RBP24.02■■□□□ 1.44
CDH23-212ENST00000616684 EFCAB2Q5VUJ9 269 aa24.01■■□□□ 1.43
CDH23-212ENST00000616684 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
CDH23-212ENST00000616684 ROCK2O75116 1388 aaKnown RBP24■■□□□ 1.43
CDH23-212ENST00000616684 RBM19Q9Y4C8 960 aaKnown RBP24■■□□□ 1.43
CDH23-212ENST00000616684 MLECQ14165 292 aa23.99■■□□□ 1.43
CDH23-212ENST00000616684 ATAD2BQ9ULI0 1458 aa23.99■■□□□ 1.43
CDH23-212ENST00000616684 RALBP1Q15311 655 aa23.97■■□□□ 1.43
CDH23-212ENST00000616684 ERICH6BQ5W0A0 696 aa23.96■■□□□ 1.43
CDH23-212ENST00000616684 STK26Q9P289 416 aa23.94■■□□□ 1.42
CDH23-212ENST00000616684 RCAN3Q9UKA8 241 aa23.94■■□□□ 1.42
CDH23-212ENST00000616684 DHX57Q6P158 1386 aaKnown RBP23.93■■□□□ 1.42
CDH23-212ENST00000616684 SOX12O15370 315 aa23.93■■□□□ 1.42
CDH23-212ENST00000616684 HNRNPMP52272 730 aaKnown RBP eCLIP23.92■■□□□ 1.42
CDH23-212ENST00000616684 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
CDH23-212ENST00000616684 HSP90AB1P08238 724 aaKnown RBP23.88■■□□□ 1.41
CDH23-212ENST00000616684 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
CDH23-212ENST00000616684 TPRNQ4KMQ1 711 aa23.87■■□□□ 1.41
CDH23-212ENST00000616684 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
CDH23-212ENST00000616684 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
CDH23-212ENST00000616684 KIF3BO15066 747 aa23.86■■□□□ 1.41
CDH23-212ENST00000616684 PTMAP06454 111 aaKnown RBP23.86■■□□□ 1.41
CDH23-212ENST00000616684 CCDC18Q5T9S5 1454 aa23.86■■□□□ 1.41
CDH23-212ENST00000616684 OS9Q13438 667 aaPredicted RBP23.85■■□□□ 1.41
CDH23-212ENST00000616684 HDGFL2Q7Z4V5 671 aaPredicted RBP23.85■■□□□ 1.41
CDH23-212ENST00000616684 RSPH4AQ5TD94 716 aa23.84■■□□□ 1.41
CDH23-212ENST00000616684 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
CDH23-212ENST00000616684 NLRP13Q86W25 1043 aa23.82■■□□□ 1.4
CDH23-212ENST00000616684 ZRSR1Q15695 479 aaKnown RBP23.81■■□□□ 1.4
CDH23-212ENST00000616684 HSCBQ8IWL3 235 aa23.79■■□□□ 1.4
CDH23-212ENST00000616684 IPO8O15397 1037 aaKnown RBP23.78■■□□□ 1.4
CDH23-212ENST00000616684 SPAG9O60271 1321 aaKnown RBP23.77■■□□□ 1.4
CDH23-212ENST00000616684 KCNJ4P48050 445 aa23.76■■□□□ 1.39
CDH23-212ENST00000616684 TCERG1O14776 1098 aaKnown RBP23.75■■□□□ 1.39
CDH23-212ENST00000616684 TSHZ2Q9NRE2 1034 aa23.75■■□□□ 1.39
CDH23-212ENST00000616684 RTF1Q92541 710 aaKnown RBP23.75■■□□□ 1.39
CDH23-212ENST00000616684 RTN4Q9NQC3 1192 aaKnown RBP23.75■■□□□ 1.39
CDH23-212ENST00000616684 EIF3AQ14152 1382 aaKnown RBP23.74■■□□□ 1.39
CDH23-212ENST00000616684 ST20-MTHFSA0A0A6YYL1 179 aa23.74■■□□□ 1.39
CDH23-212ENST00000616684 FGD1P98174 961 aa23.73■■□□□ 1.39
CDH23-212ENST00000616684 GOLGA2Q08379 1002 aa23.73■■□□□ 1.39
CDH23-212ENST00000616684 DNTTIP2Q5QJE6 756 aaKnown RBP23.71■■□□□ 1.39
CDH23-212ENST00000616684 PDE3BQ13370 1112 aa23.71■■□□□ 1.39
CDH23-212ENST00000616684 SPRYD3Q8NCJ5 442 aa23.71■■□□□ 1.39
CDH23-212ENST00000616684 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
CDH23-212ENST00000616684 RWDD1Q9H446 243 aaPredicted RBP23.7■■□□□ 1.38
CDH23-212ENST00000616684 PLCB2Q00722 1185 aa23.69■■□□□ 1.38
CDH23-212ENST00000616684 CALD1Q05682 793 aaKnown RBP23.68■■□□□ 1.38
CDH23-212ENST00000616684 ITPRIPQ8IWB1 547 aa23.68■■□□□ 1.38
CDH23-212ENST00000616684 APBB1O00213 710 aa23.68■■□□□ 1.38
CDH23-212ENST00000616684 CDK11BP21127 795 aaKnown RBP23.67■■□□□ 1.38
CDH23-212ENST00000616684 DEKP35659 375 aaKnown RBP23.67■■□□□ 1.38
CDH23-212ENST00000616684 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
CDH23-212ENST00000616684 CCDC146Q8IYE0 955 aa23.67■■□□□ 1.38
CDH23-212ENST00000616684 PRKRIP1Q9H875 184 aaPredicted RBP23.67■■□□□ 1.38
CDH23-212ENST00000616684 IGF1RP08069 1367 aa23.65■■□□□ 1.38
CDH23-212ENST00000616684 TERF2IPQ9NYB0 399 aa23.65■■□□□ 1.38
CDH23-212ENST00000616684 WASHC2CQ9Y4E1 1318 aa23.64■■□□□ 1.38
CDH23-212ENST00000616684 KIF15Q9NS87 1388 aa23.64■■□□□ 1.38
CDH23-212ENST00000616684 CFAP44Q96MT7 982 aa23.63■■□□□ 1.37
CDH23-212ENST00000616684 TAOK2Q9UL54 1235 aa23.63■■□□□ 1.37
CDH23-212ENST00000616684 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
CDH23-212ENST00000616684 NUTM2DQ5VT03 806 aaPredicted RBP23.63■■□□□ 1.37
CDH23-212ENST00000616684 MCCP23508 829 aa23.62■■□□□ 1.37
CDH23-212ENST00000616684 MYBBP1AQ9BQG0 1328 aaKnown RBP23.62■■□□□ 1.37
CDH23-212ENST00000616684 CLUAP1Q96AJ1 413 aa23.62■■□□□ 1.37
CDH23-212ENST00000616684 SMC4Q9NTJ3 1288 aa23.61■■□□□ 1.37
CDH23-212ENST00000616684 PHLDB1Q86UU1 1377 aa23.61■■□□□ 1.37
CDH23-212ENST00000616684 PANK3Q9H999 370 aa23.61■■□□□ 1.37
CDH23-212ENST00000616684 NAP1L5Q96NT1 182 aaPredicted RBP23.61■■□□□ 1.37
CDH23-212ENST00000616684 NAP1L2Q9ULW6 460 aaPredicted RBP23.61■■□□□ 1.37
CDH23-212ENST00000616684 TRAK1Q9UPV9 953 aa23.61■■□□□ 1.37
CDH23-212ENST00000616684 PAK3O75914 559 aaPredicted RBP23.59■■□□□ 1.37
CDH23-212ENST00000616684 PMFBP1Q8TBY8 1022 aa23.59■■□□□ 1.37
CDH23-212ENST00000616684 SLKQ9H2G2 1235 aaPredicted RBP23.58■■□□□ 1.37
CDH23-212ENST00000616684 CENPJQ9HC77 1338 aaPredicted RBP23.58■■□□□ 1.36
CDH23-212ENST00000616684 GOLGA6L4A6NEF3 574 aa23.57■■□□□ 1.36
CDH23-212ENST00000616684 USP47Q96K76 1375 aa23.56■■□□□ 1.36
CDH23-212ENST00000616684 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
CDH23-212ENST00000616684 L1TD1Q5T7N2 865 aaKnown RBP23.54■■□□□ 1.36
CDH23-212ENST00000616684 PTPRGP23470 1445 aa23.54■■□□□ 1.36
CDH23-212ENST00000616684 NPHP1O15259 732 aa23.53■■□□□ 1.36
CDH23-212ENST00000616684 IPO9Q96P70 1041 aaKnown RBP23.53■■□□□ 1.36
CDH23-212ENST00000616684 ZBED9Q6R2W3 1325 aa23.5■■□□□ 1.35
CDH23-212ENST00000616684 STK31Q9BXU1 1019 aa23.5■■□□□ 1.35
CDH23-212ENST00000616684 KIAA1211Q6ZU35 1233 aa23.49■■□□□ 1.35
CDH23-212ENST00000616684 RRP7AQ9Y3A4 280 aaKnown RBP23.49■■□□□ 1.35
CDH23-212ENST00000616684 MFAP1P55081 439 aaKnown RBP23.48■■□□□ 1.35
CDH23-212ENST00000616684 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
CDH23-212ENST00000616684 FGD6Q6ZV73 1430 aa23.48■■□□□ 1.35
CDH23-212ENST00000616684 GBP4Q96PP9 640 aa23.47■■□□□ 1.35
CDH23-212ENST00000616684 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
CDH23-212ENST00000616684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.47■■□□□ 1.35
CDH23-212ENST00000616684 MYOM3Q5VTT5 1437 aa23.45■■□□□ 1.34
CDH23-212ENST00000616684 KIF21BO75037 1637 aa23.45■■□□□ 1.34
CDH23-212ENST00000616684 ZNF644Q9H582 1327 aaPredicted RBP23.44■■□□□ 1.34
CDH23-212ENST00000616684 CHMP4AQ9BY43 222 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms