RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 TMF1P82094 1093 aa11.85□□□□□ -0.51
SH3GLB1-205ENST00000616170 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
SH3GLB1-205ENST00000616170 MS4A1P11836 297 aa11.84□□□□□ -0.51
SH3GLB1-205ENST00000616170 GBP4Q96PP9 640 aa11.84□□□□□ -0.51
SH3GLB1-205ENST00000616170 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
SH3GLB1-205ENST00000616170 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
SH3GLB1-205ENST00000616170 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
SH3GLB1-205ENST00000616170 KTN1Q86UP2 1357 aaKnown RBP11.82□□□□□ -0.52
SH3GLB1-205ENST00000616170 ITPRIPQ8IWB1 547 aa11.81□□□□□ -0.52
SH3GLB1-205ENST00000616170 CHMP4BQ9H444 224 aaKnown RBP11.8□□□□□ -0.52
SH3GLB1-205ENST00000616170 POGKQ9P215 609 aa11.8□□□□□ -0.52
SH3GLB1-205ENST00000616170 NRDCO43847 1150 aa11.8□□□□□ -0.52
SH3GLB1-205ENST00000616170 HSP90AA2PQ14568 343 aaPredicted RBP11.8□□□□□ -0.52
SH3GLB1-205ENST00000616170 MCCP23508 829 aa11.8□□□□□ -0.52
SH3GLB1-205ENST00000616170 MORC1Q86VD1 984 aa11.8□□□□□ -0.52
SH3GLB1-205ENST00000616170 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
SH3GLB1-205ENST00000616170 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
SH3GLB1-205ENST00000616170 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
SH3GLB1-205ENST00000616170 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
SH3GLB1-205ENST00000616170 SOX12O15370 315 aa11.79□□□□□ -0.52
SH3GLB1-205ENST00000616170 SAFB2Q14151 953 aaKnown RBP eCLIP11.79□□□□□ -0.52
SH3GLB1-205ENST00000616170 CCDC146Q8IYE0 955 aa11.78□□□□□ -0.52
SH3GLB1-205ENST00000616170 VPS8Q8N3P4 1428 aa11.77□□□□□ -0.52
SH3GLB1-205ENST00000616170 GSE1Q14687 1217 aa11.77□□□□□ -0.53
SH3GLB1-205ENST00000616170 PLIN1O60240 522 aa11.76□□□□□ -0.53
SH3GLB1-205ENST00000616170 FOXD4L5Q5VV16 416 aaPredicted RBP11.76□□□□□ -0.53
SH3GLB1-205ENST00000616170 NOL8Q76FK4 1167 aaKnown RBP11.76□□□□□ -0.53
SH3GLB1-205ENST00000616170 FOXD4L4Q8WXT5 416 aaPredicted RBP11.76□□□□□ -0.53
SH3GLB1-205ENST00000616170 RWDD1Q9H446 243 aaPredicted RBP11.76□□□□□ -0.53
SH3GLB1-205ENST00000616170 ARHGAP35Q9NRY4 1499 aa11.76□□□□□ -0.53
SH3GLB1-205ENST00000616170 CLUAP1Q96AJ1 413 aa11.76□□□□□ -0.53
SH3GLB1-205ENST00000616170 PDE4AP27815 886 aa11.75□□□□□ -0.53
SH3GLB1-205ENST00000616170 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
SH3GLB1-205ENST00000616170 PTMSP20962 102 aa11.75□□□□□ -0.53
SH3GLB1-205ENST00000616170 PKD2Q13563 968 aa11.74□□□□□ -0.53
SH3GLB1-205ENST00000616170 EIF4G1Q04637 1599 aaKnown RBP11.74□□□□□ -0.53
SH3GLB1-205ENST00000616170 ROCK2O75116 1388 aaKnown RBP11.74□□□□□ -0.53
SH3GLB1-205ENST00000616170 SRPK2P78362 688 aaKnown RBP11.73□□□□□ -0.53
SH3GLB1-205ENST00000616170 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
SH3GLB1-205ENST00000616170 RALBP1Q15311 655 aa11.73□□□□□ -0.53
SH3GLB1-205ENST00000616170 EXOC6Q8TAG9 804 aa11.73□□□□□ -0.53
SH3GLB1-205ENST00000616170 FHAD1B1AJZ9 1412 aa11.73□□□□□ -0.53
SH3GLB1-205ENST00000616170 PMFBP1Q8TBY8 1022 aa11.72□□□□□ -0.53
SH3GLB1-205ENST00000616170 CALD1Q05682 793 aaKnown RBP11.72□□□□□ -0.53
SH3GLB1-205ENST00000616170 MPHOSPH9Q99550 1183 aa11.72□□□□□ -0.53
SH3GLB1-205ENST00000616170 TNNT3P45378 269 aaPredicted RBP11.72□□□□□ -0.53
SH3GLB1-205ENST00000616170 FANCIQ9NVI1 1328 aa11.71□□□□□ -0.53
SH3GLB1-205ENST00000616170 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.54
SH3GLB1-205ENST00000616170 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.54
SH3GLB1-205ENST00000616170 USP35Q9P2H5 1018 aa11.7□□□□□ -0.54
SH3GLB1-205ENST00000616170 CCDC88BA6NC98 1476 aa11.7□□□□□ -0.54
SH3GLB1-205ENST00000616170 IPO8O15397 1037 aaKnown RBP11.7□□□□□ -0.54
SH3GLB1-205ENST00000616170 BAZ1AQ9NRL2 1556 aaPredicted RBP11.7□□□□□ -0.54
SH3GLB1-205ENST00000616170 GOLGA2Q08379 1002 aa11.69□□□□□ -0.54
SH3GLB1-205ENST00000616170 KIAA1211Q6ZU35 1233 aa11.69□□□□□ -0.54
SH3GLB1-205ENST00000616170 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
SH3GLB1-205ENST00000616170 SMC4Q9NTJ3 1288 aa11.69□□□□□ -0.54
SH3GLB1-205ENST00000616170 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
SH3GLB1-205ENST00000616170 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
SH3GLB1-205ENST00000616170 GNL2Q13823 731 aaKnown RBP11.68□□□□□ -0.54
SH3GLB1-205ENST00000616170 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
SH3GLB1-205ENST00000616170 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
SH3GLB1-205ENST00000616170 STK26Q9P289 416 aa11.68□□□□□ -0.54
SH3GLB1-205ENST00000616170 FOXD4L6Q3SYB3 417 aaPredicted RBP11.67□□□□□ -0.54
SH3GLB1-205ENST00000616170 FOXD4L3Q6VB84 417 aaPredicted RBP11.67□□□□□ -0.54
SH3GLB1-205ENST00000616170 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
SH3GLB1-205ENST00000616170 FAM161AQ3B820 660 aa11.67□□□□□ -0.54
SH3GLB1-205ENST00000616170 CFAP44Q96MT7 982 aa11.67□□□□□ -0.54
SH3GLB1-205ENST00000616170 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
SH3GLB1-205ENST00000616170 DHX57Q6P158 1386 aaKnown RBP11.66□□□□□ -0.54
SH3GLB1-205ENST00000616170 RRP1P56182 461 aaKnown RBP11.66□□□□□ -0.54
SH3GLB1-205ENST00000616170 CENPJQ9HC77 1338 aaPredicted RBP11.66□□□□□ -0.54
SH3GLB1-205ENST00000616170 HSP90B1P14625 803 aaKnown RBP11.66□□□□□ -0.54
SH3GLB1-205ENST00000616170 CUX2O14529 1486 aa11.66□□□□□ -0.54
SH3GLB1-205ENST00000616170 RRP7AQ9Y3A4 280 aaKnown RBP11.65□□□□□ -0.54
SH3GLB1-205ENST00000616170 DDX11L8A8MPP1 907 aa11.65□□□□□ -0.54
SH3GLB1-205ENST00000616170 BCL2L13Q9BXK5 485 aa11.65□□□□□ -0.54
SH3GLB1-205ENST00000616170 RTF1Q92541 710 aaKnown RBP11.64□□□□□ -0.55
SH3GLB1-205ENST00000616170 CENPQQ7L2Z9 268 aaPredicted RBP11.63□□□□□ -0.55
SH3GLB1-205ENST00000616170 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
SH3GLB1-205ENST00000616170 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
SH3GLB1-205ENST00000616170 ANO8Q9HCE9 1232 aaPredicted RBP11.63□□□□□ -0.55
SH3GLB1-205ENST00000616170 NLRP13Q86W25 1043 aa11.62□□□□□ -0.55
SH3GLB1-205ENST00000616170 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
SH3GLB1-205ENST00000616170 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
SH3GLB1-205ENST00000616170 FAM13BQ9NYF5 915 aa11.62□□□□□ -0.55
SH3GLB1-205ENST00000616170 ZBED9Q6R2W3 1325 aa11.61□□□□□ -0.55
SH3GLB1-205ENST00000616170 CLSTN1O94985 981 aa11.61□□□□□ -0.55
SH3GLB1-205ENST00000616170 SLC4A10Q6U841 1118 aa11.61□□□□□ -0.55
SH3GLB1-205ENST00000616170 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
SH3GLB1-205ENST00000616170 NUP155O75694 1391 aa11.6□□□□□ -0.55
SH3GLB1-205ENST00000616170 NPHP1O15259 732 aa11.6□□□□□ -0.55
SH3GLB1-205ENST00000616170 PRKRIP1Q9H875 184 aaPredicted RBP11.6□□□□□ -0.55
SH3GLB1-205ENST00000616170 MYBBP1AQ9BQG0 1328 aaKnown RBP11.59□□□□□ -0.55
SH3GLB1-205ENST00000616170 IL27Q8NEV9 243 aa11.59□□□□□ -0.55
SH3GLB1-205ENST00000616170 KIF15Q9NS87 1388 aa11.59□□□□□ -0.55
SH3GLB1-205ENST00000616170 CREBRFQ8IUR6 639 aa11.59□□□□□ -0.55
SH3GLB1-205ENST00000616170 FMN1Q68DA7 1419 aa11.59□□□□□ -0.55
SH3GLB1-205ENST00000616170 KANK1Q14678 1352 aa11.59□□□□□ -0.55
SH3GLB1-205ENST00000616170 BICRAQ9NZM4 1560 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms