RNA–Protein interactions for RNA: ENST00000615771.5

RBM39-244, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-244ENST00000615771 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
RBM39-244ENST00000615771 KIF3CO14782 793 aa13.35□□□□□ -0.27
RBM39-244ENST00000615771 PPP1R37O75864 691 aa13.35□□□□□ -0.27
RBM39-244ENST00000615771 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
RBM39-244ENST00000615771 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
RBM39-244ENST00000615771 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
RBM39-244ENST00000615771 NISCHQ9Y2I1 1504 aa13.33□□□□□ -0.28
RBM39-244ENST00000615771 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
RBM39-244ENST00000615771 RYDENQ9NUL5 291 aaKnown RBP13.3□□□□□ -0.28
RBM39-244ENST00000615771 C2orf72A6NCS6 295 aa13.29□□□□□ -0.28
RBM39-244ENST00000615771 HS3ST6Q96QI5 342 aa13.27□□□□□ -0.29
RBM39-244ENST00000615771 FAM205CA6NFA0 338 aa13.25□□□□□ -0.29
RBM39-244ENST00000615771 GPR153Q6NV75 609 aa13.25□□□□□ -0.29
RBM39-244ENST00000615771 TMC2Q8TDI7 906 aa13.25□□□□□ -0.29
RBM39-244ENST00000615771 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
RBM39-244ENST00000615771 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
RBM39-244ENST00000615771 SLC34A2O95436 690 aa13.2□□□□□ -0.3
RBM39-244ENST00000615771 ERBB3P21860 1342 aa13.17□□□□□ -0.3
RBM39-244ENST00000615771 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
RBM39-244ENST00000615771 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
RBM39-244ENST00000615771 GTPBP6O43824 516 aaPredicted RBP13.15□□□□□ -0.3
RBM39-244ENST00000615771 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
RBM39-244ENST00000615771 FOXK1P85037 733 aa13.14□□□□□ -0.31
RBM39-244ENST00000615771 KRTAP3-3Q9BYR6 98 aa13.14□□□□□ -0.31
RBM39-244ENST00000615771 KRTAP3-2Q9BYR7 98 aa13.14□□□□□ -0.31
RBM39-244ENST00000615771 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
RBM39-244ENST00000615771 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
RBM39-244ENST00000615771 KHSRPQ92945 711 aaKnown RBP eCLIP13.09□□□□□ -0.313e-14■■■□□ 14.6
RBM39-244ENST00000615771 PCDHGA4Q9Y5G9 962 aa13.09□□□□□ -0.31
RBM39-244ENST00000615771 SPNS2Q8IVW8 549 aa13.08□□□□□ -0.32
RBM39-244ENST00000615771 ZNF316A6NFI3 1004 aaPredicted RBP13.07□□□□□ -0.32
RBM39-244ENST00000615771 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
RBM39-244ENST00000615771 CRISPLD2Q9H0B8 497 aa13.07□□□□□ -0.32
RBM39-244ENST00000615771 DSG2Q14126 1118 aa13.06□□□□□ -0.32
RBM39-244ENST00000615771 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
RBM39-244ENST00000615771 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
RBM39-244ENST00000615771 NUDT7P0C024 238 aa13.03□□□□□ -0.32
RBM39-244ENST00000615771 RTN4Q9NQC3 1192 aaKnown RBP13.01□□□□□ -0.33
RBM39-244ENST00000615771 NCKAP5LQ9HCH0 1330 aa13□□□□□ -0.33
RBM39-244ENST00000615771 MMRN1Q13201 1228 aa13□□□□□ -0.33
RBM39-244ENST00000615771 KDM4FA0A1W2PPD8 638 aa12.99□□□□□ -0.33
RBM39-244ENST00000615771 PDE4AP27815 886 aa12.98□□□□□ -0.33
RBM39-244ENST00000615771 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
RBM39-244ENST00000615771 LHX6Q9UPM6 363 aa12.97□□□□□ -0.33
RBM39-244ENST00000615771 PPP1R15BQ5SWA1 713 aa12.96□□□□□ -0.33
RBM39-244ENST00000615771 TBC1D12O60347 775 aa12.94□□□□□ -0.34
RBM39-244ENST00000615771 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
RBM39-244ENST00000615771 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
RBM39-244ENST00000615771 MFSD10Q14728 455 aa12.92□□□□□ -0.34
RBM39-244ENST00000615771 PBX2P40425 430 aa12.91□□□□□ -0.34
RBM39-244ENST00000615771 DDX27Q96GQ7 796 aaKnown RBP12.89□□□□□ -0.35
RBM39-244ENST00000615771 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
RBM39-244ENST00000615771 CADPS2Q86UW7 1296 aa12.86□□□□□ -0.35
RBM39-244ENST00000615771 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.353e-17■□□□□ 9.2
RBM39-244ENST00000615771 UPF1Q92900 1129 aaKnown RBP eCLIP12.84□□□□□ -0.35
RBM39-244ENST00000615771 PTGER2P43116 358 aa12.83□□□□□ -0.36
RBM39-244ENST00000615771 POTEEQ6S8J3 1075 aa12.83□□□□□ -0.36
RBM39-244ENST00000615771 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
RBM39-244ENST00000615771 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
RBM39-244ENST00000615771 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
RBM39-244ENST00000615771 ABCC9O60706 1549 aa12.78□□□□□ -0.36
RBM39-244ENST00000615771 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
RBM39-244ENST00000615771 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
RBM39-244ENST00000615771 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.37
RBM39-244ENST00000615771 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
RBM39-244ENST00000615771 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
RBM39-244ENST00000615771 EMILIN3Q9NT22 766 aa12.75□□□□□ -0.37
RBM39-244ENST00000615771 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
RBM39-244ENST00000615771 EVI5O60447 810 aa12.73□□□□□ -0.37
RBM39-244ENST00000615771 CAMK2BQ13554 666 aa12.73□□□□□ -0.37
RBM39-244ENST00000615771 FOSBP53539 338 aa12.71□□□□□ -0.37
RBM39-244ENST00000615771 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
RBM39-244ENST00000615771 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
RBM39-244ENST00000615771 JPH4Q96JJ6 628 aa12.7□□□□□ -0.38
RBM39-244ENST00000615771 TK2O00142 265 aa12.69□□□□□ -0.38
RBM39-244ENST00000615771 ADGRD1Q6QNK2 874 aa12.68□□□□□ -0.38
RBM39-244ENST00000615771 PSEN2P49810 448 aa12.67□□□□□ -0.38
RBM39-244ENST00000615771 PAXIP1Q6ZW49 1069 aaPredicted RBP12.67□□□□□ -0.38
RBM39-244ENST00000615771 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
RBM39-244ENST00000615771 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
RBM39-244ENST00000615771 KCNH8Q96L42 1107 aa12.66□□□□□ -0.38
RBM39-244ENST00000615771 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
RBM39-244ENST00000615771 KCNK17Q96T54 332 aa12.64□□□□□ -0.39
RBM39-244ENST00000615771 HRO43593 1189 aa12.61□□□□□ -0.39
RBM39-244ENST00000615771 ZDHHC16Q969W1 377 aa12.61□□□□□ -0.39
RBM39-244ENST00000615771 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
RBM39-244ENST00000615771 PTPREP23469 700 aa12.59□□□□□ -0.39
RBM39-244ENST00000615771 DPYSL4O14531 572 aa12.58□□□□□ -0.4
RBM39-244ENST00000615771 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
RBM39-244ENST00000615771 PCDHGA10Q9Y5H3 936 aa12.57□□□□□ -0.4
RBM39-244ENST00000615771 PHF14O94880 888 aa12.56□□□□□ -0.4
RBM39-244ENST00000615771 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
RBM39-244ENST00000615771 VPS9D1Q9Y2B5 631 aa12.55□□□□□ -0.4
RBM39-244ENST00000615771 TYW1BQ6NUM6 668 aa12.53□□□□□ -0.4
RBM39-244ENST00000615771 ZBED2Q9BTP6 218 aa12.52□□□□□ -0.41
RBM39-244ENST00000615771 ARIH1Q9Y4X5 557 aaPredicted RBP12.52□□□□□ -0.41
RBM39-244ENST00000615771 PDIA6Q15084 440 aa12.51□□□□□ -0.41
RBM39-244ENST00000615771 E2F4Q16254 413 aa12.51□□□□□ -0.41
RBM39-244ENST00000615771 EPAS1Q99814 870 aa12.5□□□□□ -0.41
RBM39-244ENST00000615771 WDR70Q9NW82 654 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms