RNA–Protein interactions for RNA: ENST00000615229.4

ACACA-236, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,468 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-236ENST00000615229 FANCAO15360 1455 aa33.83■■■■□ 3.01
ACACA-236ENST00000615229 KDM6BO15054 1643 aa33.82■■■■□ 3
ACACA-236ENST00000615229 NEO1Q92859 1461 aa33.8■■■■□ 3
ACACA-236ENST00000615229 CCNB3Q8WWL7 1395 aa33.78■■■■□ 3
ACACA-236ENST00000615229 COL17A1Q9UMD9 1497 aaPredicted RBP33.74■■■□□ 2.99
ACACA-236ENST00000615229 SAMD9LQ8IVG5 1584 aa33.73■■■□□ 2.99
ACACA-236ENST00000615229 AKNAQ7Z591 1439 aa33.72■■■□□ 2.99
ACACA-236ENST00000615229 PPARGC1BQ86YN6 1023 aaKnown RBP33.7■■■□□ 2.99
ACACA-236ENST00000615229 RICTORQ6R327 1708 aa33.68■■■□□ 2.98
ACACA-236ENST00000615229 ABCC1P33527 1531 aa33.67■■■□□ 2.98
ACACA-236ENST00000615229 EFCAB2Q5VUJ9 269 aa33.67■■■□□ 2.98
ACACA-236ENST00000615229 FRMPD1Q5SYB0 1578 aa33.67■■■□□ 2.98
ACACA-236ENST00000615229 PHLDB1Q86UU1 1377 aa33.66■■■□□ 2.98
ACACA-236ENST00000615229 ADGRL1O94910 1474 aa33.66■■■□□ 2.98
ACACA-236ENST00000615229 MYOM3Q5VTT5 1437 aa33.64■■■□□ 2.98
ACACA-236ENST00000615229 CFDP1Q9UEE9 299 aaPredicted RBP33.62■■■□□ 2.97
ACACA-236ENST00000615229 SYCP2Q9BX26 1530 aa33.59■■■□□ 2.97
ACACA-236ENST00000615229 ARHGEF12Q9NZN5 1544 aa33.59■■■□□ 2.97
ACACA-236ENST00000615229 ZNF777Q9ULD5 760 aaPredicted RBP33.59■■■□□ 2.97
ACACA-236ENST00000615229 SCAPERQ9BY12 1400 aa33.57■■■□□ 2.97
ACACA-236ENST00000615229 CAMSAP2Q08AD1 1489 aa33.56■■■□□ 2.96
ACACA-236ENST00000615229 DENND4BO75064 1496 aaPredicted RBP33.56■■■□□ 2.96
ACACA-236ENST00000615229 ZNF644Q9H582 1327 aaPredicted RBP33.55■■■□□ 2.96
ACACA-236ENST00000615229 PTPN23Q9H3S7 1636 aa33.54■■■□□ 2.96
ACACA-236ENST00000615229 POGZQ7Z3K3 1410 aa33.53■■■□□ 2.96
ACACA-236ENST00000615229 RAPGEF3O95398 923 aa33.52■■■□□ 2.96
ACACA-236ENST00000615229 MIA2Q96PC5 1412 aa33.51■■■□□ 2.96
ACACA-236ENST00000615229 FGD6Q6ZV73 1430 aa33.5■■■□□ 2.95
ACACA-236ENST00000615229 PLEKHH2Q8IVE3 1493 aa33.49■■■□□ 2.95
ACACA-236ENST00000615229 TRAPPC8Q9Y2L5 1435 aa33.48■■■□□ 2.95
ACACA-236ENST00000615229 KDM5CP41229 1560 aa33.47■■■□□ 2.95
ACACA-236ENST00000615229 ZMYM4Q5VZL5 1548 aa33.46■■■□□ 2.95
ACACA-236ENST00000615229 KIAA1107Q9UPP5 1409 aa33.45■■■□□ 2.95
ACACA-236ENST00000615229 ZNF518AQ6AHZ1 1483 aa33.44■■■□□ 2.94
ACACA-236ENST00000615229 MBD5Q9P267 1494 aa33.43■■■□□ 2.94
ACACA-236ENST00000615229 HNRNPMP52272 730 aaKnown RBP eCLIP33.43■■■□□ 2.942e-6■■■■□ 25.1
ACACA-236ENST00000615229 TCOF1Q13428 1488 aaKnown RBP33.42■■■□□ 2.94
ACACA-236ENST00000615229 ARHGEF5Q12774 1597 aa33.4■■■□□ 2.94
ACACA-236ENST00000615229 HECW2Q9P2P5 1572 aa33.39■■■□□ 2.94
ACACA-236ENST00000615229 AFAP1Q8N556 730 aa33.38■■■□□ 2.93
ACACA-236ENST00000615229 CROCC2H7BZ55 1655 aa33.37■■■□□ 2.93
ACACA-236ENST00000615229 KIDINS220Q9ULH0 1771 aa33.36■■■□□ 2.93
ACACA-236ENST00000615229 ARHGEF40Q8TER5 1519 aa33.35■■■□□ 2.93
ACACA-236ENST00000615229 CCDC141Q6ZP82 1450 aa33.34■■■□□ 2.93
ACACA-236ENST00000615229 INO80Q9ULG1 1556 aaPredicted RBP33.34■■■□□ 2.93
ACACA-236ENST00000615229 DNMT1P26358 1616 aaKnown RBP33.33■■■□□ 2.93
ACACA-236ENST00000615229 ZFYVE16Q7Z3T8 1539 aa33.32■■■□□ 2.92
ACACA-236ENST00000615229 ABCA6Q8N139 1617 aa33.31■■■□□ 2.92
ACACA-236ENST00000615229 YEATS2Q9ULM3 1422 aa33.3■■■□□ 2.92
ACACA-236ENST00000615229 ATP7AQ04656 1500 aa33.27■■■□□ 2.92
ACACA-236ENST00000615229 MAGI2Q86UL8 1455 aa33.27■■■□□ 2.92
ACACA-236ENST00000615229 MLH3Q9UHC1 1453 aa33.27■■■□□ 2.92
ACACA-236ENST00000615229 DIP2CQ9Y2E4 1556 aa33.27■■■□□ 2.92
ACACA-236ENST00000615229 RRBP1Q9P2E9 1410 aaKnown RBP33.25■■■□□ 2.91
ACACA-236ENST00000615229 SIGLEC1Q9BZZ2 1709 aa33.25■■■□□ 2.91
ACACA-236ENST00000615229 FAM50AQ14320 339 aaKnown RBP33.24■■■□□ 2.91
ACACA-236ENST00000615229 MAST1Q9Y2H9 1570 aa33.22■■■□□ 2.91
ACACA-236ENST00000615229 ADGBQ8N7X0 1667 aa33.22■■■□□ 2.91
ACACA-236ENST00000615229 ABCC5O15440 1437 aa33.22■■■□□ 2.91
ACACA-236ENST00000615229 SPAG9O60271 1321 aaKnown RBP33.21■■■□□ 2.91
ACACA-236ENST00000615229 DAPK1P53355 1430 aa33.21■■■□□ 2.91
ACACA-236ENST00000615229 MYT1LQ9UL68 1186 aa33.17■■■□□ 2.9
ACACA-236ENST00000615229 SHANK2Q9UPX8 1470 aa33.16■■■□□ 2.9
ACACA-236ENST00000615229 RSPH4AQ5TD94 716 aa33.16■■■□□ 2.9
ACACA-236ENST00000615229 C9orf84Q5VXU9 1444 aa33.15■■■□□ 2.9
ACACA-236ENST00000615229 RTEL1-TNFRSF6BF6WH68 1400 aa33.13■■■□□ 2.89
ACACA-236ENST00000615229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.12■■■□□ 2.89
ACACA-236ENST00000615229 ATP10AO60312 1499 aa33.12■■■□□ 2.89
ACACA-236ENST00000615229 PLXNC1O60486 1568 aa33.11■■■□□ 2.89
ACACA-236ENST00000615229 REREQ9P2R6 1566 aa33.1■■■□□ 2.89
ACACA-236ENST00000615229 TSPY4P0CV99 314 aa33.08■■■□□ 2.89
ACACA-236ENST00000615229 TSPY10P0CW01 314 aa33.08■■■□□ 2.89
ACACA-236ENST00000615229 PTPRKQ15262 1439 aa33.08■■■□□ 2.89
ACACA-236ENST00000615229 A2MP01023 1474 aa33.01■■■□□ 2.88
ACACA-236ENST00000615229 ADGRL2O95490 1459 aa33■■■□□ 2.87
ACACA-236ENST00000615229 CHIC2Q9UKJ5 165 aa33■■■□□ 2.87
ACACA-236ENST00000615229 ITGAEP38570 1179 aa32.99■■■□□ 2.87
ACACA-236ENST00000615229 BCORL1Q5H9F3 1711 aa32.99■■■□□ 2.87
ACACA-236ENST00000615229 AGLP35573 1532 aa32.94■■■□□ 2.86
ACACA-236ENST00000615229 NCOA1Q15788 1441 aa32.92■■■□□ 2.86
ACACA-236ENST00000615229 KIF15Q9NS87 1388 aa32.92■■■□□ 2.86
ACACA-236ENST00000615229 DUOX2Q9NRD8 1548 aa32.92■■■□□ 2.86
ACACA-236ENST00000615229 ARID4BQ4LE39 1312 aaPredicted RBP32.91■■■□□ 2.86
ACACA-236ENST00000615229 ANKRD30AQ9BXX3 1397 aa32.9■■■□□ 2.86
ACACA-236ENST00000615229 DHX29Q7Z478 1369 aaKnown RBP32.9■■■□□ 2.86
ACACA-236ENST00000615229 RRP7BPQ9NSQ0 103 aa32.89■■■□□ 2.86
ACACA-236ENST00000615229 ADAMTSL3P82987 1691 aa32.89■■■□□ 2.86
ACACA-236ENST00000615229 EIF2AK4Q9P2K8 1649 aaKnown RBP32.88■■■□□ 2.85
ACACA-236ENST00000615229 FER1L4A9Z1Z3 1794 aa32.86■■■□□ 2.85
ACACA-236ENST00000615229 ROCK1Q13464 1354 aa32.85■■■□□ 2.85
ACACA-236ENST00000615229 GCC2Q8IWJ2 1684 aa32.84■■■□□ 2.85
ACACA-236ENST00000615229 MADDQ8WXG6 1647 aa32.84■■■□□ 2.85
ACACA-236ENST00000615229 RNF17Q9BXT8 1623 aaKnown RBP32.81■■■□□ 2.84
ACACA-236ENST00000615229 MLECQ14165 292 aa32.8■■■□□ 2.84
ACACA-236ENST00000615229 ERBINQ96RT1 1412 aa32.79■■■□□ 2.84
ACACA-236ENST00000615229 RIMS1Q86UR5 1692 aaKnown RBP32.79■■■□□ 2.84
ACACA-236ENST00000615229 MROH1Q8NDA8 1641 aa32.77■■■□□ 2.84
ACACA-236ENST00000615229 DEPDC5O75140 1603 aa32.75■■■□□ 2.83
ACACA-236ENST00000615229 KDM4FA0A1W2PPD8 638 aa32.74■■■□□ 2.83
ACACA-236ENST00000615229 KIF3BO15066 747 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms