RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 NCOA2Q15596 1464 aa20.02■□□□□ 0.8
CCL4-201ENST00000613947 ARHGAP5Q13017 1502 aa20.02■□□□□ 0.8
CCL4-201ENST00000613947 CDC42BPAQ5VT25 1732 aa20.02■□□□□ 0.79
CCL4-201ENST00000613947 CDC42BPBQ9Y5S2 1711 aa20.02■□□□□ 0.79
CCL4-201ENST00000613947 SUPT6HQ7KZ85 1726 aaKnown RBP20.01■□□□□ 0.79
CCL4-201ENST00000613947 PREX2Q70Z35 1606 aa20■□□□□ 0.79
CCL4-201ENST00000613947 CFAP74Q9C0B2 1584 aa19.99■□□□□ 0.79
CCL4-201ENST00000613947 RAPGEF3O95398 923 aa19.99■□□□□ 0.79
CCL4-201ENST00000613947 CFDP1Q9UEE9 299 aaPredicted RBP19.99■□□□□ 0.79
CCL4-201ENST00000613947 ZNF777Q9ULD5 760 aaPredicted RBP19.98■□□□□ 0.79
CCL4-201ENST00000613947 ADGRL1O94910 1474 aa19.97■□□□□ 0.79
CCL4-201ENST00000613947 SCAPERQ9BY12 1400 aa19.96■□□□□ 0.79
CCL4-201ENST00000613947 DENND4BO75064 1496 aaPredicted RBP19.94■□□□□ 0.78
CCL4-201ENST00000613947 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
CCL4-201ENST00000613947 ZNF644Q9H582 1327 aaPredicted RBP19.91■□□□□ 0.78
CCL4-201ENST00000613947 ITSN2Q9NZM3 1697 aa19.91■□□□□ 0.78
CCL4-201ENST00000613947 SAMD9LQ8IVG5 1584 aa19.89■□□□□ 0.78
CCL4-201ENST00000613947 ARHGEF12Q9NZN5 1544 aa19.89■□□□□ 0.77
CCL4-201ENST00000613947 FRMPD1Q5SYB0 1578 aa19.89■□□□□ 0.77
CCL4-201ENST00000613947 POGZQ7Z3K3 1410 aa19.89■□□□□ 0.77
CCL4-201ENST00000613947 AFAP1Q8N556 730 aa19.88■□□□□ 0.77
CCL4-201ENST00000613947 MYOM3Q5VTT5 1437 aa19.88■□□□□ 0.77
CCL4-201ENST00000613947 ABCC1P33527 1531 aa19.88■□□□□ 0.77
CCL4-201ENST00000613947 RICTORQ6R327 1708 aa19.88■□□□□ 0.77
CCL4-201ENST00000613947 HNRNPMP52272 730 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCL4-201ENST00000613947 TRAPPC8Q9Y2L5 1435 aa19.86■□□□□ 0.77
CCL4-201ENST00000613947 KIAA1107Q9UPP5 1409 aa19.85■□□□□ 0.77
CCL4-201ENST00000613947 SYCP2Q9BX26 1530 aa19.84■□□□□ 0.77
CCL4-201ENST00000613947 HRCP23327 699 aa19.84■□□□□ 0.77
CCL4-201ENST00000613947 ZNF518AQ6AHZ1 1483 aa19.84■□□□□ 0.77
CCL4-201ENST00000613947 PLEKHH2Q8IVE3 1493 aa19.84■□□□□ 0.77
CCL4-201ENST00000613947 MIA2Q96PC5 1412 aa19.83■□□□□ 0.76
CCL4-201ENST00000613947 CAMSAP2Q08AD1 1489 aa19.82■□□□□ 0.76
CCL4-201ENST00000613947 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
CCL4-201ENST00000613947 ZMYM4Q5VZL5 1548 aa19.8■□□□□ 0.76
CCL4-201ENST00000613947 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
CCL4-201ENST00000613947 KDM5CP41229 1560 aa19.79■□□□□ 0.76
CCL4-201ENST00000613947 MAGI2Q86UL8 1455 aa19.78■□□□□ 0.76
CCL4-201ENST00000613947 YEATS2Q9ULM3 1422 aa19.78■□□□□ 0.76
CCL4-201ENST00000613947 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
CCL4-201ENST00000613947 SPAG9O60271 1321 aaKnown RBP19.75■□□□□ 0.75
CCL4-201ENST00000613947 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
CCL4-201ENST00000613947 MLH3Q9UHC1 1453 aa19.75■□□□□ 0.75
CCL4-201ENST00000613947 ZFYVE16Q7Z3T8 1539 aa19.74■□□□□ 0.75
CCL4-201ENST00000613947 PTPN23Q9H3S7 1636 aa19.74■□□□□ 0.75
CCL4-201ENST00000613947 HECW2Q9P2P5 1572 aa19.72■□□□□ 0.75
CCL4-201ENST00000613947 ARHGEF40Q8TER5 1519 aa19.72■□□□□ 0.75
CCL4-201ENST00000613947 CCDC141Q6ZP82 1450 aa19.71■□□□□ 0.75
CCL4-201ENST00000613947 TCOF1Q13428 1488 aaKnown RBP19.71■□□□□ 0.75
CCL4-201ENST00000613947 ARHGEF5Q12774 1597 aa19.7■□□□□ 0.74
CCL4-201ENST00000613947 FAM50AQ14320 339 aaKnown RBP19.7■□□□□ 0.74
CCL4-201ENST00000613947 KIDINS220Q9ULH0 1771 aa19.69■□□□□ 0.74
CCL4-201ENST00000613947 TSPY4P0CV99 314 aa19.69■□□□□ 0.74
CCL4-201ENST00000613947 TSPY10P0CW01 314 aa19.69■□□□□ 0.74
CCL4-201ENST00000613947 ATP10AO60312 1499 aa19.68■□□□□ 0.74
CCL4-201ENST00000613947 ATP7AQ04656 1500 aa19.67■□□□□ 0.74
CCL4-201ENST00000613947 DIP2CQ9Y2E4 1556 aa19.66■□□□□ 0.74
CCL4-201ENST00000613947 ARID4BQ4LE39 1312 aaPredicted RBP19.66■□□□□ 0.74
CCL4-201ENST00000613947 INO80Q9ULG1 1556 aaPredicted RBP19.65■□□□□ 0.74
CCL4-201ENST00000613947 RTEL1-TNFRSF6BF6WH68 1400 aa19.65■□□□□ 0.74
CCL4-201ENST00000613947 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
CCL4-201ENST00000613947 ABCC5O15440 1437 aa19.65■□□□□ 0.74
CCL4-201ENST00000613947 C9orf84Q5VXU9 1444 aa19.64■□□□□ 0.73
CCL4-201ENST00000613947 DAPK1P53355 1430 aa19.62■□□□□ 0.73
CCL4-201ENST00000613947 SIGLEC1Q9BZZ2 1709 aa19.62■□□□□ 0.73
CCL4-201ENST00000613947 KDM4FA0A1W2PPD8 638 aa19.61■□□□□ 0.73
CCL4-201ENST00000613947 DNMT1P26358 1616 aaKnown RBP19.61■□□□□ 0.73
CCL4-201ENST00000613947 RRBP1Q9P2E9 1410 aaKnown RBP19.6■□□□□ 0.73
CCL4-201ENST00000613947 CHIC2Q9UKJ5 165 aa19.59■□□□□ 0.73
CCL4-201ENST00000613947 REREQ9P2R6 1566 aa19.58■□□□□ 0.72
CCL4-201ENST00000613947 MAST1Q9Y2H9 1570 aa19.58■□□□□ 0.72
CCL4-201ENST00000613947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.58■□□□□ 0.72
CCL4-201ENST00000613947 MLECQ14165 292 aa19.57■□□□□ 0.72
CCL4-201ENST00000613947 A2MP01023 1474 aa19.57■□□□□ 0.72
CCL4-201ENST00000613947 SHANK2Q9UPX8 1470 aa19.57■□□□□ 0.72
CCL4-201ENST00000613947 CROCC2H7BZ55 1655 aa19.56■□□□□ 0.72
CCL4-201ENST00000613947 ITGAEP38570 1179 aa19.55■□□□□ 0.72
CCL4-201ENST00000613947 PTPRKQ15262 1439 aa19.54■□□□□ 0.72
CCL4-201ENST00000613947 DHX29Q7Z478 1369 aaKnown RBP19.54■□□□□ 0.72
CCL4-201ENST00000613947 ADGBQ8N7X0 1667 aa19.54■□□□□ 0.72
CCL4-201ENST00000613947 RRP7BPQ9NSQ0 103 aa19.53■□□□□ 0.72
CCL4-201ENST00000613947 AGLP35573 1532 aa19.53■□□□□ 0.72
CCL4-201ENST00000613947 PLXNC1O60486 1568 aa19.53■□□□□ 0.72
CCL4-201ENST00000613947 BCORL1Q5H9F3 1711 aa19.52■□□□□ 0.72
CCL4-201ENST00000613947 NCOA1Q15788 1441 aa19.51■□□□□ 0.71
CCL4-201ENST00000613947 ANKRD30AQ9BXX3 1397 aa19.5■□□□□ 0.71
CCL4-201ENST00000613947 KIF15Q9NS87 1388 aa19.5■□□□□ 0.71
CCL4-201ENST00000613947 ADAMTSL3P82987 1691 aa19.49■□□□□ 0.71
CCL4-201ENST00000613947 KIF3BO15066 747 aa19.48■□□□□ 0.71
CCL4-201ENST00000613947 ADGRL2O95490 1459 aa19.47■□□□□ 0.71
CCL4-201ENST00000613947 GGT6Q6P531 493 aa19.47■□□□□ 0.71
CCL4-201ENST00000613947 DUOX2Q9NRD8 1548 aa19.46■□□□□ 0.71
CCL4-201ENST00000613947 MADDQ8WXG6 1647 aa19.45■□□□□ 0.7
CCL4-201ENST00000613947 ROCK1Q13464 1354 aa19.43■□□□□ 0.7
CCL4-201ENST00000613947 ERBINQ96RT1 1412 aa19.41■□□□□ 0.7
CCL4-201ENST00000613947 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
CCL4-201ENST00000613947 ESF1Q9H501 851 aaKnown RBP19.4■□□□□ 0.7
CCL4-201ENST00000613947 FER1L4A9Z1Z3 1794 aa19.4■□□□□ 0.7
CCL4-201ENST00000613947 PTPRMP28827 1452 aa19.39■□□□□ 0.69
CCL4-201ENST00000613947 RIMS1Q86UR5 1692 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms