RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ABCC10Q5T3U5 1492 aa31.69■■■□□ 2.66
POLR2J3-220ENST00000613744 TRHP20396 242 aaPredicted RBP31.68■■■□□ 2.66
POLR2J3-220ENST00000613744 DIP2BQ9P265 1576 aa31.67■■■□□ 2.66
POLR2J3-220ENST00000613744 CCNB3Q8WWL7 1395 aa31.67■■■□□ 2.66
POLR2J3-220ENST00000613744 ABCA9Q8IUA7 1624 aa31.61■■■□□ 2.65
POLR2J3-220ENST00000613744 KIF13AQ9H1H9 1805 aa31.59■■■□□ 2.65
POLR2J3-220ENST00000613744 GPATCH8Q9UKJ3 1502 aaKnown RBP31.59■■■□□ 2.65
POLR2J3-220ENST00000613744 TSHZ2Q9NRE2 1034 aa31.58■■■□□ 2.65
POLR2J3-220ENST00000613744 CD109Q6YHK3 1445 aa31.58■■■□□ 2.65
POLR2J3-220ENST00000613744 CDC42BPAQ5VT25 1732 aa31.57■■■□□ 2.64
POLR2J3-220ENST00000613744 ZNF777Q9ULD5 760 aaPredicted RBP31.57■■■□□ 2.64
POLR2J3-220ENST00000613744 MYOM3Q5VTT5 1437 aa31.56■■■□□ 2.64
POLR2J3-220ENST00000613744 CFDP1Q9UEE9 299 aaPredicted RBP31.55■■■□□ 2.64
POLR2J3-220ENST00000613744 GLI2P10070 1586 aa31.55■■■□□ 2.64
POLR2J3-220ENST00000613744 MYO5CQ9NQX4 1742 aa31.54■■■□□ 2.64
POLR2J3-220ENST00000613744 TSPOAP1O95153 1857 aa31.53■■■□□ 2.64
POLR2J3-220ENST00000613744 PLCH2O75038 1416 aa31.51■■■□□ 2.64
POLR2J3-220ENST00000613744 CDC42BPBQ9Y5S2 1711 aa31.51■■■□□ 2.63
POLR2J3-220ENST00000613744 ZNF644Q9H582 1327 aaPredicted RBP31.51■■■□□ 2.63
POLR2J3-220ENST00000613744 MAP3K4Q9Y6R4 1608 aa31.51■■■□□ 2.63
POLR2J3-220ENST00000613744 ARHGAP5Q13017 1502 aa31.5■■■□□ 2.63
POLR2J3-220ENST00000613744 PREX2Q70Z35 1606 aa31.49■■■□□ 2.63
POLR2J3-220ENST00000613744 ITSN2Q9NZM3 1697 aa31.48■■■□□ 2.63
POLR2J3-220ENST00000613744 FGD6Q6ZV73 1430 aa31.47■■■□□ 2.63
POLR2J3-220ENST00000613744 FAM50AQ14320 339 aaKnown RBP31.46■■■□□ 2.63
POLR2J3-220ENST00000613744 BCL11AQ9H165 835 aa31.44■■■□□ 2.62
POLR2J3-220ENST00000613744 EFCAB2Q5VUJ9 269 aa31.43■■■□□ 2.62
POLR2J3-220ENST00000613744 FANCAO15360 1455 aa31.42■■■□□ 2.62
POLR2J3-220ENST00000613744 RRBP1Q9P2E9 1410 aaKnown RBP31.4■■■□□ 2.62
POLR2J3-220ENST00000613744 MIA2Q96PC5 1412 aa31.4■■■□□ 2.62
POLR2J3-220ENST00000613744 PTPN23Q9H3S7 1636 aa31.39■■■□□ 2.62
POLR2J3-220ENST00000613744 PPRC1Q5VV67 1664 aaKnown RBP31.38■■■□□ 2.61
POLR2J3-220ENST00000613744 SAMD9LQ8IVG5 1584 aa31.36■■■□□ 2.61
POLR2J3-220ENST00000613744 CAMSAP2Q08AD1 1489 aa31.35■■■□□ 2.61
POLR2J3-220ENST00000613744 ITGAEP38570 1179 aa31.35■■■□□ 2.61
POLR2J3-220ENST00000613744 HNRNPMP52272 730 aaKnown RBP eCLIP31.34■■■□□ 2.61
POLR2J3-220ENST00000613744 ARAP3Q8WWN8 1544 aa31.34■■■□□ 2.61
POLR2J3-220ENST00000613744 AKNAQ7Z591 1439 aa31.32■■■□□ 2.6
POLR2J3-220ENST00000613744 DHX57Q6P158 1386 aaKnown RBP31.29■■■□□ 2.6
POLR2J3-220ENST00000613744 TCOF1Q13428 1488 aaKnown RBP31.28■■■□□ 2.6
POLR2J3-220ENST00000613744 ADGRL1O94910 1474 aa31.27■■■□□ 2.6
POLR2J3-220ENST00000613744 TEX14Q8IWB6 1497 aa31.27■■■□□ 2.6
POLR2J3-220ENST00000613744 SYCP2Q9BX26 1530 aa31.27■■■□□ 2.6
POLR2J3-220ENST00000613744 ARHGEF12Q9NZN5 1544 aa31.26■■■□□ 2.59
POLR2J3-220ENST00000613744 SCAPERQ9BY12 1400 aa31.24■■■□□ 2.59
POLR2J3-220ENST00000613744 NEO1Q92859 1461 aa31.24■■■□□ 2.59
POLR2J3-220ENST00000613744 CFAP74Q9C0B2 1584 aa31.23■■■□□ 2.59
POLR2J3-220ENST00000613744 ABCC1P33527 1531 aa31.23■■■□□ 2.59
POLR2J3-220ENST00000613744 AFAP1Q8N556 730 aa31.21■■■□□ 2.59
POLR2J3-220ENST00000613744 RAPGEF3O95398 923 aa31.2■■■□□ 2.58
POLR2J3-220ENST00000613744 TRAPPC8Q9Y2L5 1435 aa31.19■■■□□ 2.58
POLR2J3-220ENST00000613744 MBD5Q9P267 1494 aa31.19■■■□□ 2.58
POLR2J3-220ENST00000613744 PLEKHH2Q8IVE3 1493 aa31.18■■■□□ 2.58
POLR2J3-220ENST00000613744 KIAA1107Q9UPP5 1409 aa31.17■■■□□ 2.58
POLR2J3-220ENST00000613744 CHIC2Q9UKJ5 165 aa31.17■■■□□ 2.58
POLR2J3-220ENST00000613744 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.16■■■□□ 2.58
POLR2J3-220ENST00000613744 ABCC5O15440 1437 aa31.14■■■□□ 2.58
POLR2J3-220ENST00000613744 DAPK1P53355 1430 aa31.13■■■□□ 2.57
POLR2J3-220ENST00000613744 COL17A1Q9UMD9 1497 aaPredicted RBP31.13■■■□□ 2.57
POLR2J3-220ENST00000613744 PTPRKQ15262 1439 aa31.13■■■□□ 2.57
POLR2J3-220ENST00000613744 DNMT1P26358 1616 aaKnown RBP31.11■■■□□ 2.57
POLR2J3-220ENST00000613744 DENND4BO75064 1496 aaPredicted RBP31.11■■■□□ 2.57
POLR2J3-220ENST00000613744 CCDC141Q6ZP82 1450 aa31.09■■■□□ 2.57
POLR2J3-220ENST00000613744 MYT1LQ9UL68 1186 aa31.09■■■□□ 2.57
POLR2J3-220ENST00000613744 TSPY4P0CV99 314 aa31.08■■■□□ 2.57
POLR2J3-220ENST00000613744 TSPY10P0CW01 314 aa31.08■■■□□ 2.57
POLR2J3-220ENST00000613744 ARHGEF5Q12774 1597 aa31.08■■■□□ 2.57
POLR2J3-220ENST00000613744 POGZQ7Z3K3 1410 aa31.07■■■□□ 2.56
POLR2J3-220ENST00000613744 RSPH4AQ5TD94 716 aa31.05■■■□□ 2.56
POLR2J3-220ENST00000613744 ZNF518AQ6AHZ1 1483 aa31.04■■■□□ 2.56
POLR2J3-220ENST00000613744 SPAG9O60271 1321 aaKnown RBP31.02■■■□□ 2.56
POLR2J3-220ENST00000613744 RICTORQ6R327 1708 aa31.01■■■□□ 2.56
POLR2J3-220ENST00000613744 CROCC2H7BZ55 1655 aa31.01■■■□□ 2.56
POLR2J3-220ENST00000613744 C9orf84Q5VXU9 1444 aa31.01■■■□□ 2.56
POLR2J3-220ENST00000613744 FRMPD1Q5SYB0 1578 aa31.01■■■□□ 2.55
POLR2J3-220ENST00000613744 RRP7BPQ9NSQ0 103 aa31.01■■■□□ 2.55
POLR2J3-220ENST00000613744 KDM6BO15054 1643 aa30.99■■■□□ 2.55
POLR2J3-220ENST00000613744 KDM5CP41229 1560 aa30.94■■■□□ 2.54
POLR2J3-220ENST00000613744 SHANK2Q9UPX8 1470 aa30.93■■■□□ 2.54
POLR2J3-220ENST00000613744 ZFYVE16Q7Z3T8 1539 aa30.91■■■□□ 2.54
POLR2J3-220ENST00000613744 ATP7AQ04656 1500 aa30.9■■■□□ 2.54
POLR2J3-220ENST00000613744 HECW2Q9P2P5 1572 aa30.89■■■□□ 2.54
POLR2J3-220ENST00000613744 KIDINS220Q9ULH0 1771 aa30.89■■■□□ 2.54
POLR2J3-220ENST00000613744 NCOA1Q15788 1441 aa30.89■■■□□ 2.53
POLR2J3-220ENST00000613744 ANKRD30AQ9BXX3 1397 aa30.88■■■□□ 2.53
POLR2J3-220ENST00000613744 YEATS2Q9ULM3 1422 aa30.88■■■□□ 2.53
POLR2J3-220ENST00000613744 INO80Q9ULG1 1556 aaPredicted RBP30.88■■■□□ 2.53
POLR2J3-220ENST00000613744 MAST1Q9Y2H9 1570 aa30.87■■■□□ 2.53
POLR2J3-220ENST00000613744 MLH3Q9UHC1 1453 aa30.86■■■□□ 2.53
POLR2J3-220ENST00000613744 ADGBQ8N7X0 1667 aa30.86■■■□□ 2.53
POLR2J3-220ENST00000613744 RTEL1-TNFRSF6BF6WH68 1400 aa30.85■■■□□ 2.53
POLR2J3-220ENST00000613744 RBM19Q9Y4C8 960 aaKnown RBP30.85■■■□□ 2.53
POLR2J3-220ENST00000613744 KIF15Q9NS87 1388 aa30.84■■■□□ 2.53
POLR2J3-220ENST00000613744 ZMYM4Q5VZL5 1548 aa30.84■■■□□ 2.53
POLR2J3-220ENST00000613744 ADGRL2O95490 1459 aa30.84■■■□□ 2.53
POLR2J3-220ENST00000613744 ROCK1Q13464 1354 aa30.83■■■□□ 2.53
POLR2J3-220ENST00000613744 FKBP8Q14318 412 aa30.82■■■□□ 2.52
POLR2J3-220ENST00000613744 ABCA6Q8N139 1617 aa30.8■■■□□ 2.52
POLR2J3-220ENST00000613744 NAIPQ13075 1403 aa30.79■■■□□ 2.52
POLR2J3-220ENST00000613744 NEFLP07196 543 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms