RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 PBX2P40425 430 aa8.6□□□□□ -1.03
LINC00649-216ENST00000613667 ARSIQ5FYB1 569 aa8.6□□□□□ -1.03
LINC00649-216ENST00000613667 IFNLR1Q8IU57 520 aaPredicted RBP8.57□□□□□ -1.04
LINC00649-216ENST00000613667 KHSRPQ92945 711 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC00649-216ENST00000613667 MS4A4AQ96JQ5 239 aa8.56□□□□□ -1.04
LINC00649-216ENST00000613667 SPOCK2Q92563 424 aa8.55□□□□□ -1.04
LINC00649-216ENST00000613667 SOX12O15370 315 aa8.53□□□□□ -1.04
LINC00649-216ENST00000613667 POTEEQ6S8J3 1075 aa8.5□□□□□ -1.05
LINC00649-216ENST00000613667 TRIM41Q8WV44 630 aa8.49□□□□□ -1.05
LINC00649-216ENST00000613667 PHF8Q9UPP1 1060 aa8.49□□□□□ -1.05
LINC00649-216ENST00000613667 AXIN2Q9Y2T1 843 aa8.46□□□□□ -1.06
LINC00649-216ENST00000613667 RGS20O76081 388 aa8.45□□□□□ -1.06
LINC00649-216ENST00000613667 ADGRD1Q6QNK2 874 aa8.45□□□□□ -1.06
LINC00649-216ENST00000613667 RNF25Q96BH1 459 aaPredicted RBP8.45□□□□□ -1.06
LINC00649-216ENST00000613667 NUDT7P0C024 238 aa8.44□□□□□ -1.06
LINC00649-216ENST00000613667 LHX6Q9UPM6 363 aa8.43□□□□□ -1.06
LINC00649-216ENST00000613667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.42□□□□□ -1.06
LINC00649-216ENST00000613667 ZFP91Q96JP5 570 aaPredicted RBP8.42□□□□□ -1.06
LINC00649-216ENST00000613667 ARHGAP33O14559 1287 aa8.41□□□□□ -1.06
LINC00649-216ENST00000613667 TK2O00142 265 aa8.4□□□□□ -1.06
LINC00649-216ENST00000613667 PSDA5PKW4 1024 aaPredicted RBP8.39□□□□□ -1.07
LINC00649-216ENST00000613667 SLC34A2O95436 690 aa8.39□□□□□ -1.07
LINC00649-216ENST00000613667 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
LINC00649-216ENST00000613667 KIF3CO14782 793 aa8.38□□□□□ -1.07
LINC00649-216ENST00000613667 PCDHGA4Q9Y5G9 962 aa8.38□□□□□ -1.07
LINC00649-216ENST00000613667 RIOK3O14730 519 aaKnown RBP8.37□□□□□ -1.07
LINC00649-216ENST00000613667 HRO43593 1189 aa8.37□□□□□ -1.07
LINC00649-216ENST00000613667 FBXO22Q8NEZ5 403 aa8.37□□□□□ -1.07
LINC00649-216ENST00000613667 C2orf72A6NCS6 295 aa8.36□□□□□ -1.07
LINC00649-216ENST00000613667 NLRP6P59044 892 aa8.36□□□□□ -1.07
LINC00649-216ENST00000613667 IFFO2Q5TF58 517 aa8.36□□□□□ -1.07
LINC00649-216ENST00000613667 KCTD12Q96CX2 325 aaKnown RBP8.34□□□□□ -1.07
LINC00649-216ENST00000613667 VGFO15240 615 aaPredicted RBP8.33□□□□□ -1.08
LINC00649-216ENST00000613667 STAC3Q96MF2 364 aa8.32□□□□□ -1.08
LINC00649-216ENST00000613667 MFRPQ9BY79 579 aa8.3□□□□□ -1.08
LINC00649-216ENST00000613667 DMRTA1Q5VZB9 504 aa8.29□□□□□ -1.08
LINC00649-216ENST00000613667 PSEN2P49810 448 aa8.27□□□□□ -1.09
LINC00649-216ENST00000613667 A0A0G2JS52 829 aa8.26□□□□□ -1.09
LINC00649-216ENST00000613667 KDM4FA0A1W2PPD8 638 aa8.26□□□□□ -1.09
LINC00649-216ENST00000613667 BCL11BQ9C0K0 894 aaPredicted RBP8.26□□□□□ -1.09
LINC00649-216ENST00000613667 TMC2Q8TDI7 906 aa8.25□□□□□ -1.09
LINC00649-216ENST00000613667 PTPN5P54829 565 aa8.23□□□□□ -1.09
LINC00649-216ENST00000613667 PPP4R3BQ5MIZ7 849 aa8.23□□□□□ -1.09
LINC00649-216ENST00000613667 KCNH8Q96L42 1107 aa8.22□□□□□ -1.09
LINC00649-216ENST00000613667 TAOK2Q9UL54 1235 aa8.22□□□□□ -1.09
LINC00649-216ENST00000613667 STK24Q9Y6E0 443 aa8.22□□□□□ -1.09
LINC00649-216ENST00000613667 PTCD2Q8WV60 388 aaKnown RBP8.2□□□□□ -1.1
LINC00649-216ENST00000613667 THSD4Q6ZMP0 1018 aa8.17□□□□□ -1.1
LINC00649-216ENST00000613667 VPS9D1Q9Y2B5 631 aa8.17□□□□□ -1.1
LINC00649-216ENST00000613667 Q6ZNB5 142 aa8.16□□□□□ -1.1
LINC00649-216ENST00000613667 PPP1R37O75864 691 aa8.15□□□□□ -1.1
LINC00649-216ENST00000613667 KCNK17Q96T54 332 aa8.15□□□□□ -1.1
LINC00649-216ENST00000613667 SLC4A5Q9BY07 1137 aa8.15□□□□□ -1.1
LINC00649-216ENST00000613667 STK25O00506 426 aa8.13□□□□□ -1.11
LINC00649-216ENST00000613667 TBC1D12O60347 775 aa8.13□□□□□ -1.11
LINC00649-216ENST00000613667 GOLGA8CPA6NN73 597 aa8.11□□□□□ -1.11
LINC00649-216ENST00000613667 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
LINC00649-216ENST00000613667 WNT2BQ93097 391 aa8.1□□□□□ -1.11
LINC00649-216ENST00000613667 FOXK1P85037 733 aa8.08□□□□□ -1.12
LINC00649-216ENST00000613667 PLPP6Q8IY26 295 aa8.08□□□□□ -1.12
LINC00649-216ENST00000613667 LAPTM4AQ15012 233 aa8.07□□□□□ -1.12
LINC00649-216ENST00000613667 MRPL50Q8N5N7 158 aaKnown RBP8.07□□□□□ -1.12
LINC00649-216ENST00000613667 ITGBL1O95965 494 aaPredicted RBP8.06□□□□□ -1.12
LINC00649-216ENST00000613667 BCL2L12Q9HB09 334 aa8.06□□□□□ -1.12
LINC00649-216ENST00000613667 DSG2Q14126 1118 aa8.04□□□□□ -1.12
LINC00649-216ENST00000613667 NBPF3Q9H094 633 aa8.03□□□□□ -1.12
LINC00649-216ENST00000613667 PTPREP23469 700 aa8.02□□□□□ -1.13
LINC00649-216ENST00000613667 ZBED2Q9BTP6 218 aa8.02□□□□□ -1.13
LINC00649-216ENST00000613667 GPHNQ9NQX3 736 aaPredicted RBP8.02□□□□□ -1.13
LINC00649-216ENST00000613667 ZNF454Q8N9F8 522 aa8.01□□□□□ -1.13
LINC00649-216ENST00000613667 TRAF7Q6Q0C0 670 aa8□□□□□ -1.13
LINC00649-216ENST00000613667 RGL2O15211 777 aa7.99□□□□□ -1.13
LINC00649-216ENST00000613667 ECM2O94769 699 aaPredicted RBP7.98□□□□□ -1.13
LINC00649-216ENST00000613667 NYAP1Q6ZVC0 841 aa7.97□□□□□ -1.13
LINC00649-216ENST00000613667 OXER1Q8TDS5 423 aa7.97□□□□□ -1.13
LINC00649-216ENST00000613667 LCE2BO14633 110 aa7.96□□□□□ -1.14
LINC00649-216ENST00000613667 FOSBP53539 338 aa7.96□□□□□ -1.14
LINC00649-216ENST00000613667 UPF1Q92900 1129 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00649-216ENST00000613667 ANKK1Q8NFD2 765 aa7.95□□□□□ -1.14
LINC00649-216ENST00000613667 KCNC4Q03721 635 aa7.94□□□□□ -1.14
LINC00649-216ENST00000613667 GFRA3O60609 400 aa7.93□□□□□ -1.14
LINC00649-216ENST00000613667 PKD2Q13563 968 aa7.92□□□□□ -1.14
LINC00649-216ENST00000613667 JPH4Q96JJ6 628 aa7.91□□□□□ -1.14
LINC00649-216ENST00000613667 ADAM33Q9BZ11 813 aa7.9□□□□□ -1.14
LINC00649-216ENST00000613667 RABGEF1Q9UJ41 708 aa7.9□□□□□ -1.14
LINC00649-216ENST00000613667 SOWAHBA6NEL2 793 aa7.89□□□□□ -1.15
LINC00649-216ENST00000613667 ZDHHC16Q969W1 377 aa7.89□□□□□ -1.15
LINC00649-216ENST00000613667 NRG2O14511 850 aaPredicted RBP7.88□□□□□ -1.15
LINC00649-216ENST00000613667 LAPTM4BQ86VI4 370 aa7.88□□□□□ -1.15
LINC00649-216ENST00000613667 ANO8Q9HCE9 1232 aaPredicted RBP7.88□□□□□ -1.15
LINC00649-216ENST00000613667 BCAMP50895 628 aa7.87□□□□□ -1.15
LINC00649-216ENST00000613667 PPP1R3GB7ZBB8 358 aa7.86□□□□□ -1.15
LINC00649-216ENST00000613667 PROX2Q3B8N5 592 aa7.85□□□□□ -1.15
LINC00649-216ENST00000613667 ZNF787Q6DD87 383 aa7.85□□□□□ -1.15
LINC00649-216ENST00000613667 CRISPLD2Q9H0B8 497 aa7.84□□□□□ -1.15
LINC00649-216ENST00000613667 WBP1LQ9NX94 342 aa7.83□□□□□ -1.16
LINC00649-216ENST00000613667 EVI5O60447 810 aa7.82□□□□□ -1.16
LINC00649-216ENST00000613667 PPP1R15BQ5SWA1 713 aa7.82□□□□□ -1.16
LINC00649-216ENST00000613667 ZFRQ96KR1 1074 aaKnown RBP7.82□□□□□ -1.16
LINC00649-216ENST00000613667 COL9A1P20849 921 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms