RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 TMEM92Q6UXU6 159 aa8.9□□□□□ -0.98
CCL16-206ENST00000613642 HOXB1P14653 301 aaPredicted RBP8.89□□□□□ -0.99
CCL16-206ENST00000613642 PHF8Q9UPP1 1060 aa8.89□□□□□ -0.99
CCL16-206ENST00000613642 DOK7Q18PE1 504 aa8.88□□□□□ -0.99
CCL16-206ENST00000613642 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
CCL16-206ENST00000613642 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
CCL16-206ENST00000613642 ZNF710Q8N1W2 664 aa8.87□□□□□ -0.99
CCL16-206ENST00000613642 TAOK2Q9UL54 1235 aa8.84□□□□□ -0.99
CCL16-206ENST00000613642 NLRP6P59044 892 aa8.83□□□□□ -1
CCL16-206ENST00000613642 FBXO22Q8NEZ5 403 aa8.83□□□□□ -1
CCL16-206ENST00000613642 BCL11BQ9C0K0 894 aaPredicted RBP8.83□□□□□ -1
CCL16-206ENST00000613642 RIMBP2O15034 1052 aa8.82□□□□□ -1
CCL16-206ENST00000613642 ZSWIM6Q9HCJ5 1215 aa8.81□□□□□ -1
CCL16-206ENST00000613642 STK24Q9Y6E0 443 aa8.8□□□□□ -1
CCL16-206ENST00000613642 ERBB3P21860 1342 aa8.8□□□□□ -1
CCL16-206ENST00000613642 GPR153Q6NV75 609 aa8.79□□□□□ -1
CCL16-206ENST00000613642 MFRPQ9BY79 579 aa8.79□□□□□ -1
CCL16-206ENST00000613642 ECM2O94769 699 aaPredicted RBP8.78□□□□□ -1
CCL16-206ENST00000613642 PKD2Q13563 968 aa8.77□□□□□ -1.01
CCL16-206ENST00000613642 STK25O00506 426 aa8.76□□□□□ -1.01
CCL16-206ENST00000613642 RTN4Q9NQC3 1192 aaKnown RBP8.76□□□□□ -1.01
CCL16-206ENST00000613642 RGL2O15211 777 aa8.74□□□□□ -1.01
CCL16-206ENST00000613642 VARS2Q5ST30 1063 aaKnown RBP8.74□□□□□ -1.01
CCL16-206ENST00000613642 FAM9AQ8IZU1 332 aaPredicted RBP8.74□□□□□ -1.01
CCL16-206ENST00000613642 KIF3CO14782 793 aa8.72□□□□□ -1.01
CCL16-206ENST00000613642 AMER1Q5JTC6 1135 aaPredicted RBP8.72□□□□□ -1.01
CCL16-206ENST00000613642 ZNF687Q8N1G0 1237 aa8.72□□□□□ -1.01
CCL16-206ENST00000613642 ARSIQ5FYB1 569 aa8.7□□□□□ -1.02
CCL16-206ENST00000613642 C2orf72A6NCS6 295 aa8.68□□□□□ -1.02
CCL16-206ENST00000613642 CENPBP07199 599 aaPredicted RBP8.68□□□□□ -1.02
CCL16-206ENST00000613642 KHSRPQ92945 711 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCL16-206ENST00000613642 ZNF316A6NFI3 1004 aaPredicted RBP8.65□□□□□ -1.02
CCL16-206ENST00000613642 HOMEZQ8IX15 550 aa8.65□□□□□ -1.02
CCL16-206ENST00000613642 PPP1R37O75864 691 aa8.63□□□□□ -1.03
CCL16-206ENST00000613642 SLC34A2O95436 690 aa8.63□□□□□ -1.03
CCL16-206ENST00000613642 RNF166Q96A37 237 aaPredicted RBP8.61□□□□□ -1.03
CCL16-206ENST00000613642 NUDT7P0C024 238 aa8.59□□□□□ -1.03
CCL16-206ENST00000613642 HRCP23327 699 aa8.59□□□□□ -1.03
CCL16-206ENST00000613642 TMC2Q8TDI7 906 aa8.59□□□□□ -1.03
CCL16-206ENST00000613642 UBE2Q2Q8WVN8 375 aa8.59□□□□□ -1.03
CCL16-206ENST00000613642 MYT1LQ9UL68 1186 aa8.59□□□□□ -1.03
CCL16-206ENST00000613642 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
CCL16-206ENST00000613642 TIMELESSQ9UNS1 1208 aa8.58□□□□□ -1.04
CCL16-206ENST00000613642 PTGER2P43116 358 aa8.57□□□□□ -1.04
CCL16-206ENST00000613642 HS6ST3Q8IZP7 471 aa8.57□□□□□ -1.04
CCL16-206ENST00000613642 LHX6Q9UPM6 363 aa8.56□□□□□ -1.04
CCL16-206ENST00000613642 POTEEQ6S8J3 1075 aa8.55□□□□□ -1.04
CCL16-206ENST00000613642 ANKRD13DQ6ZTN6 518 aa8.55□□□□□ -1.04
CCL16-206ENST00000613642 LSM11P83369 360 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCL16-206ENST00000613642 PODXL2Q9NZ53 605 aa8.54□□□□□ -1.04
CCL16-206ENST00000613642 KDM4FA0A1W2PPD8 638 aa8.53□□□□□ -1.04
CCL16-206ENST00000613642 PBX2P40425 430 aa8.53□□□□□ -1.04
CCL16-206ENST00000613642 FOXK1P85037 733 aa8.52□□□□□ -1.05
CCL16-206ENST00000613642 PTCD2Q8WV60 388 aaKnown RBP8.52□□□□□ -1.05
CCL16-206ENST00000613642 GPHNQ9NQX3 736 aaPredicted RBP8.51□□□□□ -1.05
CCL16-206ENST00000613642 DNAJC5Q9H3Z4 198 aa8.5□□□□□ -1.05
CCL16-206ENST00000613642 PLPP6Q8IY26 295 aa8.49□□□□□ -1.05
CCL16-206ENST00000613642 PSDA5PKW4 1024 aaPredicted RBP8.48□□□□□ -1.05
CCL16-206ENST00000613642 CHGAP10645 457 aaKnown RBP8.48□□□□□ -1.05
CCL16-206ENST00000613642 AXIN2Q9Y2T1 843 aa8.48□□□□□ -1.05
CCL16-206ENST00000613642 DSG2Q14126 1118 aa8.46□□□□□ -1.06
CCL16-206ENST00000613642 NKX1-1Q15270 411 aaPredicted RBP8.46□□□□□ -1.06
CCL16-206ENST00000613642 TULP1O00294 542 aaPredicted RBP8.45□□□□□ -1.06
CCL16-206ENST00000613642 ARHGAP33O14559 1287 aa8.45□□□□□ -1.06
CCL16-206ENST00000613642 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
CCL16-206ENST00000613642 TBC1D12O60347 775 aa8.41□□□□□ -1.06
CCL16-206ENST00000613642 NEFLP07196 543 aa8.41□□□□□ -1.06
CCL16-206ENST00000613642 RYDENQ9NUL5 291 aaKnown RBP8.41□□□□□ -1.06
CCL16-206ENST00000613642 TK2O00142 265 aa8.4□□□□□ -1.06
CCL16-206ENST00000613642 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.06
CCL16-206ENST00000613642 OXER1Q8TDS5 423 aa8.39□□□□□ -1.07
CCL16-206ENST00000613642 HRO43593 1189 aa8.38□□□□□ -1.07
CCL16-206ENST00000613642 PSEN2P49810 448 aa8.38□□□□□ -1.07
CCL16-206ENST00000613642 PPP4R3BQ5MIZ7 849 aa8.38□□□□□ -1.07
CCL16-206ENST00000613642 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
CCL16-206ENST00000613642 ANP32EQ9BTT0 268 aa8.38□□□□□ -1.07
CCL16-206ENST00000613642 PDIA4P13667 645 aaKnown RBP8.35□□□□□ -1.07
CCL16-206ENST00000613642 PKNOX2Q96KN3 472 aa8.35□□□□□ -1.07
CCL16-206ENST00000613642 HCSTQ9UBK5 93 aa8.35□□□□□ -1.07
CCL16-206ENST00000613642 NCKAP5LQ9HCH0 1330 aa8.33□□□□□ -1.08
CCL16-206ENST00000613642 GTPBP6O43824 516 aaPredicted RBP8.33□□□□□ -1.08
CCL16-206ENST00000613642 PPP1R15BQ5SWA1 713 aa8.33□□□□□ -1.08
CCL16-206ENST00000613642 PDE4AP27815 886 aa8.32□□□□□ -1.08
CCL16-206ENST00000613642 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
CCL16-206ENST00000613642 UPF1Q92900 1129 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCL16-206ENST00000613642 KCNK17Q96T54 332 aa8.3□□□□□ -1.08
CCL16-206ENST00000613642 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
CCL16-206ENST00000613642 FOSBP53539 338 aa8.29□□□□□ -1.08
CCL16-206ENST00000613642 BCANQ96GW7 911 aa8.29□□□□□ -1.08
CCL16-206ENST00000613642 BCL2L12Q9HB09 334 aa8.29□□□□□ -1.08
CCL16-206ENST00000613642 PLA2G2EQ9NZK7 142 aa8.29□□□□□ -1.08
CCL16-206ENST00000613642 ZNF454Q8N9F8 522 aa8.28□□□□□ -1.08
CCL16-206ENST00000613642 KCNH8Q96L42 1107 aa8.28□□□□□ -1.08
CCL16-206ENST00000613642 SLC4A5Q9BY07 1137 aa8.28□□□□□ -1.08
CCL16-206ENST00000613642 VPS9D1Q9Y2B5 631 aa8.28□□□□□ -1.08
CCL16-206ENST00000613642 DCAF8L2P0C7V8 631 aa8.27□□□□□ -1.09
CCL16-206ENST00000613642 PDE4CQ08493 712 aa8.26□□□□□ -1.09
CCL16-206ENST00000613642 MFSD10Q14728 455 aa8.26□□□□□ -1.09
CCL16-206ENST00000613642 LARP6Q9BRS8 491 aaKnown RBP8.26□□□□□ -1.09
CCL16-206ENST00000613642 KCTD12Q96CX2 325 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms