RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
MDC1-209ENST00000613547 NCOA2Q15596 1464 aa20.66■□□□□ 0.9
MDC1-209ENST00000613547 AKNAQ7Z591 1439 aa20.64■□□□□ 0.89
MDC1-209ENST00000613547 PREX2Q70Z35 1606 aa20.64■□□□□ 0.89
MDC1-209ENST00000613547 GPATCH8Q9UKJ3 1502 aaKnown RBP20.63■□□□□ 0.89
MDC1-209ENST00000613547 CFDP1Q9UEE9 299 aaPredicted RBP20.63■□□□□ 0.89
MDC1-209ENST00000613547 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
MDC1-209ENST00000613547 ZNF777Q9ULD5 760 aaPredicted RBP20.59■□□□□ 0.89
MDC1-209ENST00000613547 ITSN2Q9NZM3 1697 aa20.58■□□□□ 0.89
MDC1-209ENST00000613547 DENND4BO75064 1496 aaPredicted RBP20.58■□□□□ 0.89
MDC1-209ENST00000613547 COL17A1Q9UMD9 1497 aaPredicted RBP20.58■□□□□ 0.89
MDC1-209ENST00000613547 CDC42BPAQ5VT25 1732 aa20.58■□□□□ 0.88
MDC1-209ENST00000613547 SCAPERQ9BY12 1400 aa20.57■□□□□ 0.88
MDC1-209ENST00000613547 CDC42BPBQ9Y5S2 1711 aa20.56■□□□□ 0.88
MDC1-209ENST00000613547 PLEKHH2Q8IVE3 1493 aa20.55■□□□□ 0.88
MDC1-209ENST00000613547 MYOM3Q5VTT5 1437 aa20.53■□□□□ 0.88
MDC1-209ENST00000613547 RAPGEF3O95398 923 aa20.53■□□□□ 0.88
MDC1-209ENST00000613547 ABCC1P33527 1531 aa20.51■□□□□ 0.87
MDC1-209ENST00000613547 POGZQ7Z3K3 1410 aa20.51■□□□□ 0.87
MDC1-209ENST00000613547 MIA2Q96PC5 1412 aa20.5■□□□□ 0.87
MDC1-209ENST00000613547 ZNF518AQ6AHZ1 1483 aa20.5■□□□□ 0.87
MDC1-209ENST00000613547 KIAA1107Q9UPP5 1409 aa20.49■□□□□ 0.87
MDC1-209ENST00000613547 SAMD9LQ8IVG5 1584 aa20.49■□□□□ 0.87
MDC1-209ENST00000613547 SYCP2Q9BX26 1530 aa20.46■□□□□ 0.87
MDC1-209ENST00000613547 ZNF644Q9H582 1327 aaPredicted RBP20.46■□□□□ 0.87
MDC1-209ENST00000613547 CAMSAP2Q08AD1 1489 aa20.45■□□□□ 0.86
MDC1-209ENST00000613547 HNRNPMP52272 730 aaKnown RBP eCLIP20.45■□□□□ 0.86
MDC1-209ENST00000613547 PPARGC1BQ86YN6 1023 aaKnown RBP20.45■□□□□ 0.86
MDC1-209ENST00000613547 FRMPD1Q5SYB0 1578 aa20.45■□□□□ 0.86
MDC1-209ENST00000613547 ARHGEF12Q9NZN5 1544 aa20.44■□□□□ 0.86
MDC1-209ENST00000613547 RICTORQ6R327 1708 aa20.44■□□□□ 0.86
MDC1-209ENST00000613547 FGD6Q6ZV73 1430 aa20.44■□□□□ 0.86
MDC1-209ENST00000613547 AFAP1Q8N556 730 aa20.43■□□□□ 0.86
MDC1-209ENST00000613547 MYT1LQ9UL68 1186 aa20.43■□□□□ 0.86
MDC1-209ENST00000613547 TRAPPC8Q9Y2L5 1435 aa20.43■□□□□ 0.86
MDC1-209ENST00000613547 MAGI2Q86UL8 1455 aa20.43■□□□□ 0.86
MDC1-209ENST00000613547 ZMYM4Q5VZL5 1548 aa20.43■□□□□ 0.86
MDC1-209ENST00000613547 RSPH4AQ5TD94 716 aa20.41■□□□□ 0.86
MDC1-209ENST00000613547 KDM5CP41229 1560 aa20.4■□□□□ 0.86
MDC1-209ENST00000613547 ZFYVE16Q7Z3T8 1539 aa20.38■□□□□ 0.85
MDC1-209ENST00000613547 MBD5Q9P267 1494 aa20.38■□□□□ 0.85
MDC1-209ENST00000613547 SPAG9O60271 1321 aaKnown RBP20.38■□□□□ 0.85
MDC1-209ENST00000613547 CCDC141Q6ZP82 1450 aa20.37■□□□□ 0.85
MDC1-209ENST00000613547 MLH3Q9UHC1 1453 aa20.37■□□□□ 0.85
MDC1-209ENST00000613547 PTPN23Q9H3S7 1636 aa20.35■□□□□ 0.85
MDC1-209ENST00000613547 HECW2Q9P2P5 1572 aa20.35■□□□□ 0.85
MDC1-209ENST00000613547 ARHGEF40Q8TER5 1519 aa20.35■□□□□ 0.85
MDC1-209ENST00000613547 TCOF1Q13428 1488 aaKnown RBP20.35■□□□□ 0.85
MDC1-209ENST00000613547 ARHGEF5Q12774 1597 aa20.34■□□□□ 0.85
MDC1-209ENST00000613547 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
MDC1-209ENST00000613547 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
MDC1-209ENST00000613547 YEATS2Q9ULM3 1422 aa20.34■□□□□ 0.85
MDC1-209ENST00000613547 FAM50AQ14320 339 aaKnown RBP20.33■□□□□ 0.85
MDC1-209ENST00000613547 RTEL1-TNFRSF6BF6WH68 1400 aa20.3■□□□□ 0.84
MDC1-209ENST00000613547 ATP7AQ04656 1500 aa20.3■□□□□ 0.84
MDC1-209ENST00000613547 ATP10AO60312 1499 aa20.3■□□□□ 0.84
MDC1-209ENST00000613547 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.84
MDC1-209ENST00000613547 C9orf84Q5VXU9 1444 aa20.27■□□□□ 0.84
MDC1-209ENST00000613547 INO80Q9ULG1 1556 aaPredicted RBP20.27■□□□□ 0.84
MDC1-209ENST00000613547 DAPK1P53355 1430 aa20.26■□□□□ 0.83
MDC1-209ENST00000613547 DIP2CQ9Y2E4 1556 aa20.25■□□□□ 0.83
MDC1-209ENST00000613547 ABCC5O15440 1437 aa20.25■□□□□ 0.83
MDC1-209ENST00000613547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.24■□□□□ 0.83
MDC1-209ENST00000613547 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
MDC1-209ENST00000613547 SHANK2Q9UPX8 1470 aa20.24■□□□□ 0.83
MDC1-209ENST00000613547 DNMT1P26358 1616 aaKnown RBP20.24■□□□□ 0.83
MDC1-209ENST00000613547 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
MDC1-209ENST00000613547 RRBP1Q9P2E9 1410 aaKnown RBP20.23■□□□□ 0.83
MDC1-209ENST00000613547 MAST1Q9Y2H9 1570 aa20.22■□□□□ 0.83
MDC1-209ENST00000613547 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
MDC1-209ENST00000613547 A2MP01023 1474 aa20.19■□□□□ 0.82
MDC1-209ENST00000613547 CROCC2H7BZ55 1655 aa20.17■□□□□ 0.82
MDC1-209ENST00000613547 ANKRD30AQ9BXX3 1397 aa20.17■□□□□ 0.82
MDC1-209ENST00000613547 CHIC2Q9UKJ5 165 aa20.16■□□□□ 0.82
MDC1-209ENST00000613547 DHX29Q7Z478 1369 aaKnown RBP20.16■□□□□ 0.82
MDC1-209ENST00000613547 AGLP35573 1532 aa20.16■□□□□ 0.82
MDC1-209ENST00000613547 ADGBQ8N7X0 1667 aa20.16■□□□□ 0.82
MDC1-209ENST00000613547 ITGAEP38570 1179 aa20.15■□□□□ 0.82
MDC1-209ENST00000613547 PLXNC1O60486 1568 aa20.15■□□□□ 0.82
MDC1-209ENST00000613547 KIF15Q9NS87 1388 aa20.13■□□□□ 0.81
MDC1-209ENST00000613547 MLECQ14165 292 aa20.12■□□□□ 0.81
MDC1-209ENST00000613547 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
MDC1-209ENST00000613547 ADGRL2O95490 1459 aa20.11■□□□□ 0.81
MDC1-209ENST00000613547 DUOX2Q9NRD8 1548 aa20.11■□□□□ 0.81
MDC1-209ENST00000613547 NCOA1Q15788 1441 aa20.1■□□□□ 0.81
MDC1-209ENST00000613547 ROCK1Q13464 1354 aa20.08■□□□□ 0.81
MDC1-209ENST00000613547 BCORL1Q5H9F3 1711 aa20.08■□□□□ 0.81
MDC1-209ENST00000613547 SIGLEC1Q9BZZ2 1709 aa20.08■□□□□ 0.81
MDC1-209ENST00000613547 KDM4FA0A1W2PPD8 638 aa20.08■□□□□ 0.81
MDC1-209ENST00000613547 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.81
MDC1-209ENST00000613547 PTPRKQ15262 1439 aa20.08■□□□□ 0.8
MDC1-209ENST00000613547 KIF3BO15066 747 aa20.07■□□□□ 0.8
MDC1-209ENST00000613547 ERBINQ96RT1 1412 aa20.07■□□□□ 0.8
MDC1-209ENST00000613547 GGT6Q6P531 493 aa20.05■□□□□ 0.8
MDC1-209ENST00000613547 ADAMTSL3P82987 1691 aa20.03■□□□□ 0.8
MDC1-209ENST00000613547 PPP6R1Q9UPN7 881 aa20.03■□□□□ 0.8
MDC1-209ENST00000613547 EIF2AK4Q9P2K8 1649 aaKnown RBP20.02■□□□□ 0.8
MDC1-209ENST00000613547 ANKRD50Q9ULJ7 1429 aa20.01■□□□□ 0.79
MDC1-209ENST00000613547 MADDQ8WXG6 1647 aa20■□□□□ 0.79
MDC1-209ENST00000613547 CNTLNQ9NXG0 1405 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms