RNA–Protein interactions for RNA: ENST00000612674.1

USP12-202, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 2

Gene USP12, Length 712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-202ENST00000612674 RIMBP2O15034 1052 aa13.97□□□□□ -0.17
USP12-202ENST00000612674 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
USP12-202ENST00000612674 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
USP12-202ENST00000612674 FBXO22Q8NEZ5 403 aa13.92□□□□□ -0.18
USP12-202ENST00000612674 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
USP12-202ENST00000612674 GPR153Q6NV75 609 aa13.91□□□□□ -0.18
USP12-202ENST00000612674 NLRP6P59044 892 aa13.9□□□□□ -0.18
USP12-202ENST00000612674 STK24Q9Y6E0 443 aa13.87□□□□□ -0.19
USP12-202ENST00000612674 MFRPQ9BY79 579 aa13.86□□□□□ -0.19
USP12-202ENST00000612674 TAOK2Q9UL54 1235 aa13.86□□□□□ -0.19
USP12-202ENST00000612674 ARSIQ5FYB1 569 aa13.82□□□□□ -0.2
USP12-202ENST00000612674 ZNF687Q8N1G0 1237 aa13.82□□□□□ -0.2
USP12-202ENST00000612674 STK25O00506 426 aa13.81□□□□□ -0.2
USP12-202ENST00000612674 CCDC180Q9P1Z9 1646 aa13.81□□□□□ -0.2
USP12-202ENST00000612674 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
USP12-202ENST00000612674 KHSRPQ92945 711 aaKnown RBP eCLIP13.77□□□□□ -0.213e-6■■□□□ 12.2
USP12-202ENST00000612674 KIF3CO14782 793 aa13.76□□□□□ -0.21
USP12-202ENST00000612674 PKD2Q13563 968 aa13.75□□□□□ -0.21
USP12-202ENST00000612674 RGL2O15211 777 aa13.74□□□□□ -0.21
USP12-202ENST00000612674 C2orf72A6NCS6 295 aa13.73□□□□□ -0.21
USP12-202ENST00000612674 RNF166Q96A37 237 aaPredicted RBP13.73□□□□□ -0.21
USP12-202ENST00000612674 ZNF316A6NFI3 1004 aaPredicted RBP13.71□□□□□ -0.21
USP12-202ENST00000612674 MYT1LQ9UL68 1186 aa13.69□□□□□ -0.22
USP12-202ENST00000612674 NUDT7P0C024 238 aa13.63□□□□□ -0.23
USP12-202ENST00000612674 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
USP12-202ENST00000612674 PPP1R37O75864 691 aa13.62□□□□□ -0.23
USP12-202ENST00000612674 SLC34A2O95436 690 aa13.61□□□□□ -0.23
USP12-202ENST00000612674 PCDHGA4Q9Y5G9 962 aa13.6□□□□□ -0.23
USP12-202ENST00000612674 PTGER2P43116 358 aa13.59□□□□□ -0.23
USP12-202ENST00000612674 LSM11P83369 360 aaKnown RBP eCLIP13.59□□□□□ -0.23
USP12-202ENST00000612674 TMC2Q8TDI7 906 aa13.58□□□□□ -0.24
USP12-202ENST00000612674 LHX6Q9UPM6 363 aa13.57□□□□□ -0.24
USP12-202ENST00000612674 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
USP12-202ENST00000612674 PBX2P40425 430 aa13.51□□□□□ -0.25
USP12-202ENST00000612674 AXIN2Q9Y2T1 843 aa13.51□□□□□ -0.25
USP12-202ENST00000612674 KDM4FA0A1W2PPD8 638 aa13.46□□□□□ -0.25
USP12-202ENST00000612674 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
USP12-202ENST00000612674 PTCD2Q8WV60 388 aaKnown RBP13.43□□□□□ -0.26
USP12-202ENST00000612674 FOXK1P85037 733 aa13.42□□□□□ -0.26
USP12-202ENST00000612674 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
USP12-202ENST00000612674 GPHNQ9NQX3 736 aaPredicted RBP13.39□□□□□ -0.27
USP12-202ENST00000612674 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
USP12-202ENST00000612674 ARHGAP33O14559 1287 aa13.38□□□□□ -0.27
USP12-202ENST00000612674 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
USP12-202ENST00000612674 DSG2Q14126 1118 aa13.36□□□□□ -0.27
USP12-202ENST00000612674 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
USP12-202ENST00000612674 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
USP12-202ENST00000612674 PSEN2P49810 448 aa13.31□□□□□ -0.28
USP12-202ENST00000612674 DMRTA1Q5VZB9 504 aa13.31□□□□□ -0.28
USP12-202ENST00000612674 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
USP12-202ENST00000612674 TK2O00142 265 aa13.27□□□□□ -0.29
USP12-202ENST00000612674 HRO43593 1189 aa13.27□□□□□ -0.29
USP12-202ENST00000612674 TBC1D12O60347 775 aa13.27□□□□□ -0.29
USP12-202ENST00000612674 HCSTQ9UBK5 93 aa13.27□□□□□ -0.29
USP12-202ENST00000612674 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
USP12-202ENST00000612674 DNAJC5Q9H3Z4 198 aa13.26□□□□□ -0.29
USP12-202ENST00000612674 OXER1Q8TDS5 423 aa13.22□□□□□ -0.29
USP12-202ENST00000612674 PLA2G2EQ9NZK7 142 aa13.22□□□□□ -0.29
USP12-202ENST00000612674 CRISPLD2Q9H0B8 497 aa13.21□□□□□ -0.29
USP12-202ENST00000612674 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
USP12-202ENST00000612674 KCNK17Q96T54 332 aa13.19□□□□□ -0.3
USP12-202ENST00000612674 PPP1R15BQ5SWA1 713 aa13.15□□□□□ -0.3
USP12-202ENST00000612674 RYDENQ9NUL5 291 aaKnown RBP13.15□□□□□ -0.3
USP12-202ENST00000612674 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
USP12-202ENST00000612674 UNC13AQ9UPW8 1703 aa13.14□□□□□ -0.31
USP12-202ENST00000612674 KCTD12Q96CX2 325 aaKnown RBP13.14□□□□□ -0.31
USP12-202ENST00000612674 NACADO15069 1562 aa13.13□□□□□ -0.31
USP12-202ENST00000612674 ZNF454Q8N9F8 522 aa13.13□□□□□ -0.31
USP12-202ENST00000612674 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
USP12-202ENST00000612674 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
USP12-202ENST00000612674 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
USP12-202ENST00000612674 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
USP12-202ENST00000612674 FOSBP53539 338 aa13.08□□□□□ -0.32
USP12-202ENST00000612674 PDE4AP27815 886 aa13.07□□□□□ -0.32
USP12-202ENST00000612674 ANO8Q9HCE9 1232 aaPredicted RBP13.07□□□□□ -0.32
USP12-202ENST00000612674 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
USP12-202ENST00000612674 SLC4A5Q9BY07 1137 aa13.05□□□□□ -0.32
USP12-202ENST00000612674 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
USP12-202ENST00000612674 EVI5O60447 810 aa13.01□□□□□ -0.33
USP12-202ENST00000612674 PTPREP23469 700 aa13.01□□□□□ -0.33
USP12-202ENST00000612674 LARP6Q9BRS8 491 aaKnown RBP13.01□□□□□ -0.33
USP12-202ENST00000612674 PTPN5P54829 565 aa13□□□□□ -0.33
USP12-202ENST00000612674 JPH4Q96JJ6 628 aa13□□□□□ -0.33
USP12-202ENST00000612674 ZBED2Q9BTP6 218 aa13□□□□□ -0.33
USP12-202ENST00000612674 DDX27Q96GQ7 796 aaKnown RBP12.99□□□□□ -0.33
USP12-202ENST00000612674 ADAM33Q9BZ11 813 aa12.98□□□□□ -0.33
USP12-202ENST00000612674 ZDHHC16Q969W1 377 aa12.97□□□□□ -0.33
USP12-202ENST00000612674 BICRAQ9NZM4 1560 aa12.97□□□□□ -0.33
USP12-202ENST00000612674 MFSD10Q14728 455 aa12.96□□□□□ -0.33
USP12-202ENST00000612674 THSD4Q6ZMP0 1018 aa12.94□□□□□ -0.34
USP12-202ENST00000612674 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
USP12-202ENST00000612674 MAP3K9P80192 1104 aa12.93□□□□□ -0.34
USP12-202ENST00000612674 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
USP12-202ENST00000612674 WNT2BQ93097 391 aa12.9□□□□□ -0.34
USP12-202ENST00000612674 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.34
USP12-202ENST00000612674 GOLGA8CPA6NN73 597 aa12.89□□□□□ -0.35
USP12-202ENST00000612674 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
USP12-202ENST00000612674 PCDHGA10Q9Y5H3 936 aa12.89□□□□□ -0.35
USP12-202ENST00000612674 CADPS2Q86UW7 1296 aa12.88□□□□□ -0.35
USP12-202ENST00000612674 CC2D2AQ9P2K1 1620 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms