RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 MLH3Q9UHC1 1453 aa12.12□□□□□ -0.47
CBWD1-219ENST00000611457 ARHGEF12Q9NZN5 1544 aa12.12□□□□□ -0.47
CBWD1-219ENST00000611457 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
CBWD1-219ENST00000611457 KIDINS220Q9ULH0 1771 aa12.1□□□□□ -0.47
CBWD1-219ENST00000611457 DEPDC5O75140 1603 aa12.1□□□□□ -0.47
CBWD1-219ENST00000611457 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
CBWD1-219ENST00000611457 FBLN2P98095 1184 aa12.09□□□□□ -0.47
CBWD1-219ENST00000611457 DIP2CQ9Y2E4 1556 aa12.09□□□□□ -0.47
CBWD1-219ENST00000611457 CYB5RLQ6IPT4 315 aa12.09□□□□□ -0.47
CBWD1-219ENST00000611457 POGZQ7Z3K3 1410 aa12.08□□□□□ -0.48
CBWD1-219ENST00000611457 TCOF1Q13428 1488 aaKnown RBP12.07□□□□□ -0.48
CBWD1-219ENST00000611457 SHANK2Q9UPX8 1470 aa12.07□□□□□ -0.48
CBWD1-219ENST00000611457 ABCA6Q8N139 1617 aa12.07□□□□□ -0.48
CBWD1-219ENST00000611457 KDM5DQ9BY66 1539 aa12.07□□□□□ -0.48
CBWD1-219ENST00000611457 CD109Q6YHK3 1445 aa12.06□□□□□ -0.48
CBWD1-219ENST00000611457 ZFYVE16Q7Z3T8 1539 aa12.05□□□□□ -0.48
CBWD1-219ENST00000611457 FER1L4A9Z1Z3 1794 aa12.05□□□□□ -0.48
CBWD1-219ENST00000611457 RTEL1-TNFRSF6BF6WH68 1400 aa12.05□□□□□ -0.48
CBWD1-219ENST00000611457 CLIP1P30622 1438 aa12.05□□□□□ -0.48
CBWD1-219ENST00000611457 CDK13Q14004 1512 aaKnown RBP12.04□□□□□ -0.48
CBWD1-219ENST00000611457 COL17A1Q9UMD9 1497 aaPredicted RBP12.04□□□□□ -0.48
CBWD1-219ENST00000611457 ZNF518AQ6AHZ1 1483 aa12.03□□□□□ -0.48
CBWD1-219ENST00000611457 VPS8Q8N3P4 1428 aa12.02□□□□□ -0.49
CBWD1-219ENST00000611457 PREX1Q8TCU6 1659 aa12.02□□□□□ -0.49
CBWD1-219ENST00000611457 CAMSAP2Q08AD1 1489 aa12□□□□□ -0.49
CBWD1-219ENST00000611457 MIA2Q96PC5 1412 aa11.99□□□□□ -0.49
CBWD1-219ENST00000611457 FANCAO15360 1455 aa11.99□□□□□ -0.49
CBWD1-219ENST00000611457 DNMT1P26358 1616 aaKnown RBP11.99□□□□□ -0.49
CBWD1-219ENST00000611457 VWDEQ8N2E2 1590 aa11.99□□□□□ -0.49
CBWD1-219ENST00000611457 AKNAQ7Z591 1439 aa11.98□□□□□ -0.49
CBWD1-219ENST00000611457 DENND4BO75064 1496 aaPredicted RBP11.98□□□□□ -0.49
CBWD1-219ENST00000611457 GPATCH8Q9UKJ3 1502 aaKnown RBP11.97□□□□□ -0.49
CBWD1-219ENST00000611457 NPM1P06748 294 aaKnown RBP eCLIP11.97□□□□□ -0.49
CBWD1-219ENST00000611457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.97□□□□□ -0.49
CBWD1-219ENST00000611457 PTPN23Q9H3S7 1636 aa11.96□□□□□ -0.49
CBWD1-219ENST00000611457 C9orf84Q5VXU9 1444 aa11.95□□□□□ -0.5
CBWD1-219ENST00000611457 ADGRL2O95490 1459 aa11.95□□□□□ -0.5
CBWD1-219ENST00000611457 MBD5Q9P267 1494 aa11.95□□□□□ -0.5
CBWD1-219ENST00000611457 LMTK2Q8IWU2 1503 aa11.95□□□□□ -0.5
CBWD1-219ENST00000611457 LRRC9Q6ZRR7 1453 aa11.94□□□□□ -0.5
CBWD1-219ENST00000611457 ATP7AQ04656 1500 aa11.93□□□□□ -0.5
CBWD1-219ENST00000611457 MROH1Q8NDA8 1641 aa11.93□□□□□ -0.5
CBWD1-219ENST00000611457 C3P01024 1663 aa11.92□□□□□ -0.5
CBWD1-219ENST00000611457 ATP10AO60312 1499 aa11.92□□□□□ -0.5
CBWD1-219ENST00000611457 FAM9AQ8IZU1 332 aaPredicted RBP11.92□□□□□ -0.5
CBWD1-219ENST00000611457 UNC13BO14795 1591 aa11.92□□□□□ -0.5
CBWD1-219ENST00000611457 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
CBWD1-219ENST00000611457 ADGRL1O94910 1474 aa11.9□□□□□ -0.5
CBWD1-219ENST00000611457 NCOA2Q15596 1464 aa11.9□□□□□ -0.5
CBWD1-219ENST00000611457 MADDQ8WXG6 1647 aa11.9□□□□□ -0.5
CBWD1-219ENST00000611457 GCC2Q8IWJ2 1684 aa11.9□□□□□ -0.5
CBWD1-219ENST00000611457 NEURL4Q96JN8 1562 aa11.9□□□□□ -0.51
CBWD1-219ENST00000611457 NPATQ14207 1427 aa11.87□□□□□ -0.51
CBWD1-219ENST00000611457 CNTLNQ9NXG0 1405 aa11.87□□□□□ -0.51
CBWD1-219ENST00000611457 ARHGAP5Q13017 1502 aa11.87□□□□□ -0.51
CBWD1-219ENST00000611457 FAM69CQ0P6D2 419 aa11.86□□□□□ -0.51
CBWD1-219ENST00000611457 RIMS1Q86UR5 1692 aaKnown RBP11.85□□□□□ -0.51
CBWD1-219ENST00000611457 IQSEC2Q5JU85 1478 aa11.85□□□□□ -0.51
CBWD1-219ENST00000611457 SYCP2Q9BX26 1530 aa11.85□□□□□ -0.51
CBWD1-219ENST00000611457 CCDC141Q6ZP82 1450 aa11.83□□□□□ -0.52
CBWD1-219ENST00000611457 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
CBWD1-219ENST00000611457 MYO3AQ8NEV4 1616 aa11.83□□□□□ -0.52
CBWD1-219ENST00000611457 PPP6R1Q9UPN7 881 aa11.83□□□□□ -0.52
CBWD1-219ENST00000611457 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
CBWD1-219ENST00000611457 SPATA31D1Q6ZQQ2 1576 aa11.82□□□□□ -0.52
CBWD1-219ENST00000611457 DUOX2Q9NRD8 1548 aa11.82□□□□□ -0.52
CBWD1-219ENST00000611457 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
CBWD1-219ENST00000611457 LMTK3Q96Q04 1460 aa11.81□□□□□ -0.52
CBWD1-219ENST00000611457 CAMSAP1Q5T5Y3 1602 aa11.81□□□□□ -0.52
CBWD1-219ENST00000611457 IQGAP3Q86VI3 1631 aa11.8□□□□□ -0.52
CBWD1-219ENST00000611457 ERBINQ96RT1 1412 aa11.8□□□□□ -0.52
CBWD1-219ENST00000611457 MYOM3Q5VTT5 1437 aa11.8□□□□□ -0.52
CBWD1-219ENST00000611457 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
CBWD1-219ENST00000611457 ARHGAP31Q2M1Z3 1444 aa11.79□□□□□ -0.52
CBWD1-219ENST00000611457 TET3O43151 1660 aa11.78□□□□□ -0.52
CBWD1-219ENST00000611457 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
CBWD1-219ENST00000611457 PLA2R1Q13018 1463 aa11.77□□□□□ -0.53
CBWD1-219ENST00000611457 STRCQ7RTU9 1775 aa11.77□□□□□ -0.53
CBWD1-219ENST00000611457 SETD1BQ9UPS6 1966 aaKnown RBP11.77□□□□□ -0.53
CBWD1-219ENST00000611457 PTPRMP28827 1452 aa11.76□□□□□ -0.53
CBWD1-219ENST00000611457 CLTCQ00610 1675 aaKnown RBP11.76□□□□□ -0.53
CBWD1-219ENST00000611457 SCAPERQ9BY12 1400 aa11.74□□□□□ -0.53
CBWD1-219ENST00000611457 ROCK1Q13464 1354 aa11.73□□□□□ -0.53
CBWD1-219ENST00000611457 A2MP01023 1474 aa11.72□□□□□ -0.53
CBWD1-219ENST00000611457 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
CBWD1-219ENST00000611457 TRAPPC8Q9Y2L5 1435 aa11.72□□□□□ -0.53
CBWD1-219ENST00000611457 UGGT1Q9NYU2 1555 aa11.71□□□□□ -0.53
CBWD1-219ENST00000611457 EFCAB2Q5VUJ9 269 aa11.71□□□□□ -0.53
CBWD1-219ENST00000611457 PZPP20742 1482 aa11.71□□□□□ -0.53
CBWD1-219ENST00000611457 SYNMO15061 1565 aa11.71□□□□□ -0.54
CBWD1-219ENST00000611457 RRBP1Q9P2E9 1410 aaKnown RBP11.7□□□□□ -0.54
CBWD1-219ENST00000611457 UBR1Q8IWV7 1749 aa11.7□□□□□ -0.54
CBWD1-219ENST00000611457 ABCC3O15438 1527 aa11.7□□□□□ -0.54
CBWD1-219ENST00000611457 YEATS2Q9ULM3 1422 aa11.69□□□□□ -0.54
CBWD1-219ENST00000611457 CEP152O94986 1710 aa11.69□□□□□ -0.54
CBWD1-219ENST00000611457 EFCAB6Q5THR3 1501 aa11.69□□□□□ -0.54
CBWD1-219ENST00000611457 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
CBWD1-219ENST00000611457 MED14O60244 1454 aa11.67□□□□□ -0.54
CBWD1-219ENST00000611457 PRAG1Q86YV5 1406 aa11.67□□□□□ -0.54
CBWD1-219ENST00000611457 PTPRTO14522 1441 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms