RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
TARDBP-212ENST00000611008 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
TARDBP-212ENST00000611008 RNF166Q96A37 237 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-212ENST00000611008 ZNF687Q8N1G0 1237 aa12.74□□□□□ -0.37
TARDBP-212ENST00000611008 MYT1LQ9UL68 1186 aa12.71□□□□□ -0.37
TARDBP-212ENST00000611008 NLRP6P59044 892 aa12.69□□□□□ -0.38
TARDBP-212ENST00000611008 ARSIQ5FYB1 569 aa12.68□□□□□ -0.38
TARDBP-212ENST00000611008 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
TARDBP-212ENST00000611008 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-212ENST00000611008 PTGER2P43116 358 aa12.63□□□□□ -0.39
TARDBP-212ENST00000611008 FBXO22Q8NEZ5 403 aa12.62□□□□□ -0.39
TARDBP-212ENST00000611008 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
TARDBP-212ENST00000611008 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
TARDBP-212ENST00000611008 ANKRD13DQ6ZTN6 518 aa12.6□□□□□ -0.39
TARDBP-212ENST00000611008 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.391e-10■■■■□ 25
TARDBP-212ENST00000611008 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
TARDBP-212ENST00000611008 STK25O00506 426 aa12.54□□□□□ -0.4
TARDBP-212ENST00000611008 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.43e-9■■□□□ 11.9
TARDBP-212ENST00000611008 C2orf72A6NCS6 295 aa12.52□□□□□ -0.41
TARDBP-212ENST00000611008 KIF3CO14782 793 aa12.51□□□□□ -0.41
TARDBP-212ENST00000611008 NUDT7P0C024 238 aa12.49□□□□□ -0.41
TARDBP-212ENST00000611008 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-212ENST00000611008 PBX2P40425 430 aa12.47□□□□□ -0.41
TARDBP-212ENST00000611008 TMC2Q8TDI7 906 aa12.45□□□□□ -0.42
TARDBP-212ENST00000611008 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
TARDBP-212ENST00000611008 PCDHGA4Q9Y5G9 962 aa12.44□□□□□ -0.42
TARDBP-212ENST00000611008 SLC34A2O95436 690 aa12.43□□□□□ -0.42
TARDBP-212ENST00000611008 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
TARDBP-212ENST00000611008 POTEEQ6S8J3 1075 aa12.37□□□□□ -0.43
TARDBP-212ENST00000611008 RGL2O15211 777 aa12.35□□□□□ -0.43
TARDBP-212ENST00000611008 PSDA5PKW4 1024 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-212ENST00000611008 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
TARDBP-212ENST00000611008 PKD2Q13563 968 aa12.31□□□□□ -0.44
TARDBP-212ENST00000611008 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
TARDBP-212ENST00000611008 PPP1R37O75864 691 aa12.3□□□□□ -0.44
TARDBP-212ENST00000611008 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
TARDBP-212ENST00000611008 PLA2G2EQ9NZK7 142 aa12.28□□□□□ -0.44
TARDBP-212ENST00000611008 PTCD2Q8WV60 388 aaKnown RBP12.25□□□□□ -0.45
TARDBP-212ENST00000611008 KDM4FA0A1W2PPD8 638 aa12.22□□□□□ -0.45
TARDBP-212ENST00000611008 TK2O00142 265 aa12.22□□□□□ -0.45
TARDBP-212ENST00000611008 FOXK1P85037 733 aa12.22□□□□□ -0.45
TARDBP-212ENST00000611008 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
TARDBP-212ENST00000611008 PSEN2P49810 448 aa12.2□□□□□ -0.46
TARDBP-212ENST00000611008 TBC1D12O60347 775 aa12.19□□□□□ -0.46
TARDBP-212ENST00000611008 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
TARDBP-212ENST00000611008 DMRTA1Q5VZB9 504 aa12.19□□□□□ -0.46
TARDBP-212ENST00000611008 STAC3Q96MF2 364 aa12.18□□□□□ -0.46
TARDBP-212ENST00000611008 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
TARDBP-212ENST00000611008 HRO43593 1189 aa12.17□□□□□ -0.46
TARDBP-212ENST00000611008 KCNH8Q96L42 1107 aa12.15□□□□□ -0.46
TARDBP-212ENST00000611008 DSG2Q14126 1118 aa12.14□□□□□ -0.47
TARDBP-212ENST00000611008 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
TARDBP-212ENST00000611008 KCNK17Q96T54 332 aa12.11□□□□□ -0.47
TARDBP-212ENST00000611008 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
TARDBP-212ENST00000611008 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
TARDBP-212ENST00000611008 OXER1Q8TDS5 423 aa12.03□□□□□ -0.48
TARDBP-212ENST00000611008 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.48
TARDBP-212ENST00000611008 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
TARDBP-212ENST00000611008 ZNF454Q8N9F8 522 aa12.02□□□□□ -0.49
TARDBP-212ENST00000611008 PTPN5P54829 565 aa12□□□□□ -0.49
TARDBP-212ENST00000611008 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
TARDBP-212ENST00000611008 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
TARDBP-212ENST00000611008 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
TARDBP-212ENST00000611008 PPP1R15BQ5SWA1 713 aa11.95□□□□□ -0.5
TARDBP-212ENST00000611008 CRISPLD2Q9H0B8 497 aa11.95□□□□□ -0.5
TARDBP-212ENST00000611008 PTPREP23469 700 aa11.94□□□□□ -0.5
TARDBP-212ENST00000611008 GOLGA8CPA6NN73 597 aa11.93□□□□□ -0.5
TARDBP-212ENST00000611008 FOSBP53539 338 aa11.93□□□□□ -0.5
TARDBP-212ENST00000611008 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
TARDBP-212ENST00000611008 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
TARDBP-212ENST00000611008 BHMG1C9JSJ3 638 aaPredicted RBP11.9□□□□□ -0.5
TARDBP-212ENST00000611008 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
TARDBP-212ENST00000611008 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
TARDBP-212ENST00000611008 PDE4AP27815 886 aa11.89□□□□□ -0.51
TARDBP-212ENST00000611008 WNT2BQ93097 391 aa11.89□□□□□ -0.51
TARDBP-212ENST00000611008 ZBED2Q9BTP6 218 aa11.89□□□□□ -0.51
TARDBP-212ENST00000611008 RGS20O76081 388 aa11.88□□□□□ -0.51
TARDBP-212ENST00000611008 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
TARDBP-212ENST00000611008 JPH4Q96JJ6 628 aa11.88□□□□□ -0.51
TARDBP-212ENST00000611008 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
TARDBP-212ENST00000611008 EVI5O60447 810 aa11.86□□□□□ -0.51
TARDBP-212ENST00000611008 ZDHHC16Q969W1 377 aa11.86□□□□□ -0.51
TARDBP-212ENST00000611008 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
TARDBP-212ENST00000611008 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
TARDBP-212ENST00000611008 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
TARDBP-212ENST00000611008 A0A0G2JS52 829 aa11.8□□□□□ -0.52
TARDBP-212ENST00000611008 MAP3K9P80192 1104 aa11.8□□□□□ -0.52
TARDBP-212ENST00000611008 LARP6Q9BRS8 491 aaKnown RBP11.8□□□□□ -0.52
TARDBP-212ENST00000611008 IRX2Q9BZI1 471 aaPredicted RBP11.8□□□□□ -0.52
TARDBP-212ENST00000611008 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
TARDBP-212ENST00000611008 PPP1R3GB7ZBB8 358 aa11.74□□□□□ -0.53
TARDBP-212ENST00000611008 ANKK1Q8NFD2 765 aa11.73□□□□□ -0.53
TARDBP-212ENST00000611008 RABGEF1Q9UJ41 708 aa11.73□□□□□ -0.53
TARDBP-212ENST00000611008 GTPBP6O43824 516 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-212ENST00000611008 PCDHGA10Q9Y5H3 936 aa11.72□□□□□ -0.53
TARDBP-212ENST00000611008 MFSD10Q14728 455 aa11.71□□□□□ -0.53
TARDBP-212ENST00000611008 PROX2Q3B8N5 592 aa11.7□□□□□ -0.54
TARDBP-212ENST00000611008 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
TARDBP-212ENST00000611008 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
TARDBP-212ENST00000611008 COL9A1P20849 921 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms