RNA–Protein interactions for RNA: ENST00000610966.4

SVOP-205, Transcript of SV2 related protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVOP, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-205ENST00000610966 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
SVOP-205ENST00000610966 STK26Q9P289 416 aa12.22□□□□□ -0.45
SVOP-205ENST00000610966 TPRNQ4KMQ1 711 aa12.22□□□□□ -0.45
SVOP-205ENST00000610966 EFCAB2Q5VUJ9 269 aa12.22□□□□□ -0.45
SVOP-205ENST00000610966 NUP155O75694 1391 aa12.21□□□□□ -0.45
SVOP-205ENST00000610966 KTN1Q86UP2 1357 aaKnown RBP12.21□□□□□ -0.45
SVOP-205ENST00000610966 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
SVOP-205ENST00000610966 ANKRD30AQ9BXX3 1397 aa12.2□□□□□ -0.46
SVOP-205ENST00000610966 ROCK2O75116 1388 aaKnown RBP12.19□□□□□ -0.46
SVOP-205ENST00000610966 HDGFL2Q7Z4V5 671 aaPredicted RBP12.19□□□□□ -0.46
SVOP-205ENST00000610966 NPHP1O15259 732 aa12.19□□□□□ -0.46
SVOP-205ENST00000610966 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
SVOP-205ENST00000610966 NOP58Q9Y2X3 529 aaKnown RBP12.18□□□□□ -0.46
SVOP-205ENST00000610966 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
SVOP-205ENST00000610966 KCNJ4P48050 445 aa12.18□□□□□ -0.46
SVOP-205ENST00000610966 WIZO95785 1651 aa12.17□□□□□ -0.46
SVOP-205ENST00000610966 FGD1P98174 961 aa12.17□□□□□ -0.46
SVOP-205ENST00000610966 TULP1O00294 542 aaPredicted RBP12.17□□□□□ -0.46
SVOP-205ENST00000610966 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
SVOP-205ENST00000610966 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
SVOP-205ENST00000610966 RALBP1Q15311 655 aa12.15□□□□□ -0.46
SVOP-205ENST00000610966 RAPGEF2Q9Y4G8 1499 aa12.15□□□□□ -0.46
SVOP-205ENST00000610966 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
SVOP-205ENST00000610966 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
SVOP-205ENST00000610966 HNRNPMP52272 730 aaKnown RBP eCLIP12.14□□□□□ -0.47
SVOP-205ENST00000610966 FHOD3Q2V2M9 1422 aa12.14□□□□□ -0.47
SVOP-205ENST00000610966 KIF3BO15066 747 aa12.14□□□□□ -0.47
SVOP-205ENST00000610966 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
SVOP-205ENST00000610966 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
SVOP-205ENST00000610966 DNTTIP2Q5QJE6 756 aaKnown RBP12.13□□□□□ -0.47
SVOP-205ENST00000610966 HSCBQ8IWL3 235 aa12.12□□□□□ -0.47
SVOP-205ENST00000610966 IPO8O15397 1037 aaKnown RBP12.12□□□□□ -0.47
SVOP-205ENST00000610966 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
SVOP-205ENST00000610966 NAP1L2Q9ULW6 460 aaPredicted RBP12.12□□□□□ -0.47
SVOP-205ENST00000610966 L3MBTL2Q969R5 705 aa12.12□□□□□ -0.47
SVOP-205ENST00000610966 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
SVOP-205ENST00000610966 RCAN3Q9UKA8 241 aa12.11□□□□□ -0.47
SVOP-205ENST00000610966 ERICH6BQ5W0A0 696 aa12.11□□□□□ -0.47
SVOP-205ENST00000610966 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
SVOP-205ENST00000610966 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
SVOP-205ENST00000610966 EIF3AQ14152 1382 aaKnown RBP12.1□□□□□ -0.47
SVOP-205ENST00000610966 CALD1Q05682 793 aaKnown RBP12.1□□□□□ -0.47
SVOP-205ENST00000610966 CCDC18Q5T9S5 1454 aa12.1□□□□□ -0.47
SVOP-205ENST00000610966 MCCP23508 829 aa12.09□□□□□ -0.47
SVOP-205ENST00000610966 SPAG9O60271 1321 aaKnown RBP12.09□□□□□ -0.47
SVOP-205ENST00000610966 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
SVOP-205ENST00000610966 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
SVOP-205ENST00000610966 APBB1O00213 710 aa12.07□□□□□ -0.48
SVOP-205ENST00000610966 GOLGA6L4A6NEF3 574 aa12.07□□□□□ -0.48
SVOP-205ENST00000610966 TERF2IPQ9NYB0 399 aa12.06□□□□□ -0.48
SVOP-205ENST00000610966 WASHC2CQ9Y4E1 1318 aa12.06□□□□□ -0.48
SVOP-205ENST00000610966 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
SVOP-205ENST00000610966 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
SVOP-205ENST00000610966 SPRYD3Q8NCJ5 442 aa12.05□□□□□ -0.48
SVOP-205ENST00000610966 RWDD1Q9H446 243 aaPredicted RBP12.05□□□□□ -0.48
SVOP-205ENST00000610966 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
SVOP-205ENST00000610966 CSB-PGBD3P0DP91 1061 aa12.04□□□□□ -0.48
SVOP-205ENST00000610966 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
SVOP-205ENST00000610966 NLRP13Q86W25 1043 aa12.04□□□□□ -0.48
SVOP-205ENST00000610966 GOLGA6L6A8MZA4 724 aa12.03□□□□□ -0.48
SVOP-205ENST00000610966 KIAA1211Q6ZU35 1233 aa12.02□□□□□ -0.49
SVOP-205ENST00000610966 NAP1L5Q96NT1 182 aaPredicted RBP12.02□□□□□ -0.49
SVOP-205ENST00000610966 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
SVOP-205ENST00000610966 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
SVOP-205ENST00000610966 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
SVOP-205ENST00000610966 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
SVOP-205ENST00000610966 STK31Q9BXU1 1019 aa12.01□□□□□ -0.49
SVOP-205ENST00000610966 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
SVOP-205ENST00000610966 NRDCO43847 1150 aa12.01□□□□□ -0.49
SVOP-205ENST00000610966 SMARCA4P51532 1647 aa12□□□□□ -0.49
SVOP-205ENST00000610966 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
SVOP-205ENST00000610966 PMFBP1Q8TBY8 1022 aa12□□□□□ -0.49
SVOP-205ENST00000610966 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
SVOP-205ENST00000610966 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
SVOP-205ENST00000610966 RUSC2Q8N2Y8 1516 aa11.99□□□□□ -0.49
SVOP-205ENST00000610966 NGDNQ8NEJ9 315 aaKnown RBP11.99□□□□□ -0.49
SVOP-205ENST00000610966 PDE3BQ13370 1112 aa11.99□□□□□ -0.49
SVOP-205ENST00000610966 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
SVOP-205ENST00000610966 CCDC144AA2RUR9 1427 aa11.98□□□□□ -0.49
SVOP-205ENST00000610966 ST20-MTHFSA0A0A6YYL1 179 aa11.98□□□□□ -0.49
SVOP-205ENST00000610966 DHX57Q6P158 1386 aaKnown RBP11.97□□□□□ -0.49
SVOP-205ENST00000610966 L1TD1Q5T7N2 865 aaKnown RBP11.97□□□□□ -0.49
SVOP-205ENST00000610966 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
SVOP-205ENST00000610966 KIF15Q9NS87 1388 aa11.97□□□□□ -0.49
SVOP-205ENST00000610966 PHLDB1Q86UU1 1377 aa11.97□□□□□ -0.49
SVOP-205ENST00000610966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.97□□□□□ -0.49
SVOP-205ENST00000610966 CENPJQ9HC77 1338 aaPredicted RBP11.96□□□□□ -0.49
SVOP-205ENST00000610966 AMPHP49418 695 aa11.96□□□□□ -0.5
SVOP-205ENST00000610966 LMOD3Q0VAK6 560 aa11.96□□□□□ -0.5
SVOP-205ENST00000610966 PANK3Q9H999 370 aa11.95□□□□□ -0.5
SVOP-205ENST00000610966 NUTM2FA1L443 756 aa11.95□□□□□ -0.5
SVOP-205ENST00000610966 PTPRGP23470 1445 aa11.95□□□□□ -0.5
SVOP-205ENST00000610966 MYBBP1AQ9BQG0 1328 aaKnown RBP11.95□□□□□ -0.5
SVOP-205ENST00000610966 HMMRO75330 724 aa11.95□□□□□ -0.5
SVOP-205ENST00000610966 GNL2Q13823 731 aaKnown RBP11.95□□□□□ -0.5
SVOP-205ENST00000610966 GBP4Q96PP9 640 aa11.95□□□□□ -0.5
SVOP-205ENST00000610966 SLC4A10Q6U841 1118 aa11.94□□□□□ -0.5
SVOP-205ENST00000610966 SLKQ9H2G2 1235 aaPredicted RBP11.94□□□□□ -0.5
SVOP-205ENST00000610966 ISY1Q9ULR0 285 aaKnown RBP11.94□□□□□ -0.5
SVOP-205ENST00000610966 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms