RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
CCL16-204ENST00000610493 NCKAP5LQ9HCH0 1330 aa14.02□□□□□ -0.16
CCL16-204ENST00000610493 POTEFA5A3E0 1075 aa14.01□□□□□ -0.17
CCL16-204ENST00000610493 LARP6Q9BRS8 491 aaKnown RBP14.01□□□□□ -0.17
CCL16-204ENST00000610493 PDE4AP27815 886 aa13.98□□□□□ -0.17
CCL16-204ENST00000610493 BCANQ96GW7 911 aa13.98□□□□□ -0.17
CCL16-204ENST00000610493 L3MBTL3Q96JM7 780 aaPredicted RBP13.97□□□□□ -0.17
CCL16-204ENST00000610493 CRISPLD2Q9H0B8 497 aa13.96□□□□□ -0.17
CCL16-204ENST00000610493 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
CCL16-204ENST00000610493 DDX27Q96GQ7 796 aaKnown RBP13.92□□□□□ -0.18
CCL16-204ENST00000610493 TMC2Q8TDI7 906 aa13.9□□□□□ -0.18
CCL16-204ENST00000610493 KCNV2Q8TDN2 545 aa13.9□□□□□ -0.18
CCL16-204ENST00000610493 NBR1Q14596 966 aa13.9□□□□□ -0.19
CCL16-204ENST00000610493 P3H3Q8IVL6 736 aa13.9□□□□□ -0.19
CCL16-204ENST00000610493 GPHNQ9NQX3 736 aaPredicted RBP13.9□□□□□ -0.19
CCL16-204ENST00000610493 E2F4Q16254 413 aa13.88□□□□□ -0.19
CCL16-204ENST00000610493 MFSD10Q14728 455 aa13.87□□□□□ -0.19
CCL16-204ENST00000610493 PPP1R15BQ5SWA1 713 aa13.85□□□□□ -0.19
CCL16-204ENST00000610493 C3orf67Q6ZVT6 689 aa13.85□□□□□ -0.19
CCL16-204ENST00000610493 C2orf72A6NCS6 295 aa13.84□□□□□ -0.19
CCL16-204ENST00000610493 DSG2Q14126 1118 aa13.83□□□□□ -0.2
CCL16-204ENST00000610493 TMEM92Q6UXU6 159 aa13.82□□□□□ -0.2
CCL16-204ENST00000610493 ABCC9O60706 1549 aa13.82□□□□□ -0.2
CCL16-204ENST00000610493 NACADO15069 1562 aa13.78□□□□□ -0.2
CCL16-204ENST00000610493 KIF3CO14782 793 aa13.77□□□□□ -0.21
CCL16-204ENST00000610493 FOXK1P85037 733 aa13.77□□□□□ -0.21
CCL16-204ENST00000610493 PLPP6Q8IY26 295 aa13.77□□□□□ -0.21
CCL16-204ENST00000610493 POTEB2H3BUK9 544 aa13.74□□□□□ -0.21
CCL16-204ENST00000610493 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
CCL16-204ENST00000610493 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.74□□□□□ -0.21
CCL16-204ENST00000610493 CAMK2BQ13554 666 aa13.73□□□□□ -0.21
CCL16-204ENST00000610493 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
CCL16-204ENST00000610493 RSF1Q96T23 1441 aaPredicted RBP13.71□□□□□ -0.21
CCL16-204ENST00000610493 SCRIBQ14160 1630 aa13.7□□□□□ -0.22
CCL16-204ENST00000610493 EMILIN3Q9NT22 766 aa13.69□□□□□ -0.22
CCL16-204ENST00000610493 DPYSL4O14531 572 aa13.66□□□□□ -0.22
CCL16-204ENST00000610493 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCL16-204ENST00000610493 SEMA3EO15041 775 aa13.64□□□□□ -0.23
CCL16-204ENST00000610493 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
CCL16-204ENST00000610493 ARIH1Q9Y4X5 557 aaPredicted RBP13.61□□□□□ -0.23
CCL16-204ENST00000610493 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
CCL16-204ENST00000610493 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
CCL16-204ENST00000610493 RB1CC1Q8TDY2 1594 aa13.57□□□□□ -0.24
CCL16-204ENST00000610493 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
CCL16-204ENST00000610493 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
CCL16-204ENST00000610493 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
CCL16-204ENST00000610493 OXER1Q8TDS5 423 aa13.53□□□□□ -0.24
CCL16-204ENST00000610493 TESPA1A2RU30 521 aaPredicted RBP13.53□□□□□ -0.24
CCL16-204ENST00000610493 TULP1O00294 542 aaPredicted RBP13.51□□□□□ -0.25
CCL16-204ENST00000610493 PDIA6Q15084 440 aa13.51□□□□□ -0.25
CCL16-204ENST00000610493 MLLT3P42568 568 aaPredicted RBP13.5□□□□□ -0.25
CCL16-204ENST00000610493 SPDYE16A6NNV3 312 aaPredicted RBP13.5□□□□□ -0.25
CCL16-204ENST00000610493 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
CCL16-204ENST00000610493 PTCD2Q8WV60 388 aaKnown RBP13.48□□□□□ -0.25
CCL16-204ENST00000610493 TBC1D12O60347 775 aa13.47□□□□□ -0.25
CCL16-204ENST00000610493 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCL16-204ENST00000610493 SLC34A2O95436 690 aa13.46□□□□□ -0.25
CCL16-204ENST00000610493 CECR2Q9BXF3 1484 aa13.46□□□□□ -0.25
CCL16-204ENST00000610493 EVI5O60447 810 aa13.45□□□□□ -0.26
CCL16-204ENST00000610493 LHX8Q68G74 356 aa13.45□□□□□ -0.26
CCL16-204ENST00000610493 SMYD5Q6GMV2 418 aa13.45□□□□□ -0.26
CCL16-204ENST00000610493 OTUD5Q96G74 571 aa13.44□□□□□ -0.26
CCL16-204ENST00000610493 PCDHGA4Q9Y5G9 962 aa13.44□□□□□ -0.26
CCL16-204ENST00000610493 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
CCL16-204ENST00000610493 GRXCR2A6NFK2 248 aa13.43□□□□□ -0.26
CCL16-204ENST00000610493 DOK7Q18PE1 504 aa13.42□□□□□ -0.26
CCL16-204ENST00000610493 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
CCL16-204ENST00000610493 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
CCL16-204ENST00000610493 DDX12PQ92771 950 aa13.41□□□□□ -0.26
CCL16-204ENST00000610493 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
CCL16-204ENST00000610493 LOC105371045A0A1W2PR82 267 aa13.38□□□□□ -0.27
CCL16-204ENST00000610493 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
CCL16-204ENST00000610493 KHSRPQ92945 711 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCL16-204ENST00000610493 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
CCL16-204ENST00000610493 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
CCL16-204ENST00000610493 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
CCL16-204ENST00000610493 HRCP23327 699 aa13.36□□□□□ -0.27
CCL16-204ENST00000610493 NUDT7P0C024 238 aa13.34□□□□□ -0.27
CCL16-204ENST00000610493 SNPHO15079 494 aa13.31□□□□□ -0.28
CCL16-204ENST00000610493 PTGER2P43116 358 aa13.31□□□□□ -0.28
CCL16-204ENST00000610493 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
CCL16-204ENST00000610493 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
CCL16-204ENST00000610493 WIZO95785 1651 aa13.29□□□□□ -0.28
CCL16-204ENST00000610493 OSBPP22059 807 aa13.28□□□□□ -0.28
CCL16-204ENST00000610493 ZC3H15Q8WU90 426 aaKnown RBP13.28□□□□□ -0.28
CCL16-204ENST00000610493 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
CCL16-204ENST00000610493 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
CCL16-204ENST00000610493 GPIHBP1Q8IV16 184 aa13.28□□□□□ -0.28
CCL16-204ENST00000610493 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
CCL16-204ENST00000610493 NUTM2FA1L443 756 aa13.25□□□□□ -0.29
CCL16-204ENST00000610493 PRIM1P49642 420 aaKnown RBP13.24□□□□□ -0.29
CCL16-204ENST00000610493 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
CCL16-204ENST00000610493 PCDHGA10Q9Y5H3 936 aa13.23□□□□□ -0.29
CCL16-204ENST00000610493 TOP2AP11388 1531 aaKnown RBP13.22□□□□□ -0.29
CCL16-204ENST00000610493 PHF14O94880 888 aa13.22□□□□□ -0.29
CCL16-204ENST00000610493 TRIM26Q12899 539 aaPredicted RBP13.22□□□□□ -0.29
CCL16-204ENST00000610493 ZNF454Q8N9F8 522 aa13.21□□□□□ -0.29
CCL16-204ENST00000610493 SMARCA4P51532 1647 aa13.21□□□□□ -0.29
CCL16-204ENST00000610493 EIF4G1Q04637 1599 aaKnown RBP13.21□□□□□ -0.3
CCL16-204ENST00000610493 LHX6Q9UPM6 363 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms