RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 MAPK8IP3Q9UPT6 1336 aa25.43■■□□□ 1.66
COL15A1-205ENST00000610452 RGL3Q3MIN7 710 aa25.42■■□□□ 1.66
COL15A1-205ENST00000610452 RWDD1Q9H446 243 aaPredicted RBP25.41■■□□□ 1.66
COL15A1-205ENST00000610452 FGD1P98174 961 aa25.41■■□□□ 1.66
COL15A1-205ENST00000610452 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.41■■□□□ 1.66
COL15A1-205ENST00000610452 GOLGA6L1Q8N7Z2 621 aa25.41■■□□□ 1.66
COL15A1-205ENST00000610452 STAG3Q9UJ98 1225 aa25.4■■□□□ 1.66
COL15A1-205ENST00000610452 BRPF3Q9ULD4 1205 aa25.4■■□□□ 1.66
COL15A1-205ENST00000610452 KCNJ4P48050 445 aa25.39■■□□□ 1.66
COL15A1-205ENST00000610452 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.66
COL15A1-205ENST00000610452 FAM161AQ3B820 660 aa25.37■■□□□ 1.65
COL15A1-205ENST00000610452 SKOR2Q2VWA4 1001 aaPredicted RBP25.37■■□□□ 1.65
COL15A1-205ENST00000610452 MAP7D2Q96T17 732 aa25.36■■□□□ 1.65
COL15A1-205ENST00000610452 KIF27Q86VH2 1401 aa25.34■■□□□ 1.65
COL15A1-205ENST00000610452 NFKBIBQ15653 356 aa25.33■■□□□ 1.65
COL15A1-205ENST00000610452 CSPP1Q1MSJ5 1256 aa25.33■■□□□ 1.65
COL15A1-205ENST00000610452 FOXD4L1Q9NU39 408 aa25.33■■□□□ 1.65
COL15A1-205ENST00000610452 PMFBP1Q8TBY8 1022 aa25.33■■□□□ 1.64
COL15A1-205ENST00000610452 SOGA1O94964 1423 aa25.32■■□□□ 1.64
COL15A1-205ENST00000610452 DDX49Q9Y6V7 483 aaKnown RBP25.32■■□□□ 1.64
COL15A1-205ENST00000610452 SETQ01105 290 aaPredicted RBP25.31■■□□□ 1.64
COL15A1-205ENST00000610452 PHF14O94880 888 aa25.3■■□□□ 1.64
COL15A1-205ENST00000610452 TAOK2Q9UL54 1235 aa25.3■■□□□ 1.64
COL15A1-205ENST00000610452 MTERF4Q7Z6M4 381 aaKnown RBP25.3■■□□□ 1.64
COL15A1-205ENST00000610452 NAP1L2Q9ULW6 460 aaPredicted RBP25.28■■□□□ 1.64
COL15A1-205ENST00000610452 TPM2P07951 284 aa25.27■■□□□ 1.64
COL15A1-205ENST00000610452 CENPQQ7L2Z9 268 aaPredicted RBP25.24■■□□□ 1.63
COL15A1-205ENST00000610452 HTATSF1O43719 755 aaKnown RBP25.23■■□□□ 1.63
COL15A1-205ENST00000610452 PDE3BQ13370 1112 aa25.23■■□□□ 1.63
COL15A1-205ENST00000610452 VPS8Q8N3P4 1428 aa25.23■■□□□ 1.63
COL15A1-205ENST00000610452 ESF1Q9H501 851 aaKnown RBP25.23■■□□□ 1.63
COL15A1-205ENST00000610452 KTN1Q86UP2 1357 aaKnown RBP25.23■■□□□ 1.63
COL15A1-205ENST00000610452 CFDP1Q9UEE9 299 aaPredicted RBP25.22■■□□□ 1.63
COL15A1-205ENST00000610452 SETD5Q9C0A6 1442 aa25.21■■□□□ 1.63
COL15A1-205ENST00000610452 OS9Q13438 667 aaPredicted RBP25.21■■□□□ 1.63
COL15A1-205ENST00000610452 RALBP1Q15311 655 aa25.21■■□□□ 1.63
COL15A1-205ENST00000610452 EXOC6Q8TAG9 804 aa25.2■■□□□ 1.62
COL15A1-205ENST00000610452 NOC3LQ8WTT2 800 aaKnown RBP25.2■■□□□ 1.62
COL15A1-205ENST00000610452 R3HCC1Q9Y3T6 440 aaKnown RBP25.19■■□□□ 1.62
COL15A1-205ENST00000610452 RRP9O43818 475 aaKnown RBP25.18■■□□□ 1.62
COL15A1-205ENST00000610452 APPP05067 770 aa25.18■■□□□ 1.62
COL15A1-205ENST00000610452 PPP1R15AO75807 674 aaPredicted RBP25.18■■□□□ 1.62
COL15A1-205ENST00000610452 UBE2Q2Q8WVN8 375 aa25.18■■□□□ 1.62
COL15A1-205ENST00000610452 PLEKHD1A6NEE1 506 aa25.18■■□□□ 1.62
COL15A1-205ENST00000610452 TMF1P82094 1093 aa25.18■■□□□ 1.62
COL15A1-205ENST00000610452 TPM4P67936 248 aa25.17■■□□□ 1.62
COL15A1-205ENST00000610452 U2SURPO15042 1029 aaKnown RBP25.17■■□□□ 1.62
COL15A1-205ENST00000610452 IPO8O15397 1037 aaKnown RBP25.17■■□□□ 1.62
COL15A1-205ENST00000610452 KANK4Q5T7N3 995 aaPredicted RBP25.17■■□□□ 1.62
COL15A1-205ENST00000610452 MRE11P49959 708 aa25.16■■□□□ 1.62
COL15A1-205ENST00000610452 ITPRIPQ8IWB1 547 aa25.15■■□□□ 1.62
COL15A1-205ENST00000610452 TEX35Q5T0J7 233 aa25.15■■□□□ 1.62
COL15A1-205ENST00000610452 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
COL15A1-205ENST00000610452 ZBED9Q6R2W3 1325 aa25.15■■□□□ 1.62
COL15A1-205ENST00000610452 RRP1P56182 461 aaKnown RBP25.13■■□□□ 1.61
COL15A1-205ENST00000610452 CHMP5Q9NZZ3 219 aa25.13■■□□□ 1.61
COL15A1-205ENST00000610452 PAK3O75914 559 aaPredicted RBP25.12■■□□□ 1.61
COL15A1-205ENST00000610452 APBB1O00213 710 aa25.12■■□□□ 1.61
COL15A1-205ENST00000610452 KIAA1211Q6ZU35 1233 aa25.12■■□□□ 1.61
COL15A1-205ENST00000610452 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
COL15A1-205ENST00000610452 GOLGA2Q08379 1002 aa25.1■■□□□ 1.61
COL15A1-205ENST00000610452 GPS2Q13227 327 aa25.1■■□□□ 1.61
COL15A1-205ENST00000610452 FHAD1B1AJZ9 1412 aa25.1■■□□□ 1.61
COL15A1-205ENST00000610452 ST18O60284 1047 aa25.09■■□□□ 1.61
COL15A1-205ENST00000610452 NPM1P06748 294 aaKnown RBP eCLIP25.09■■□□□ 1.61
COL15A1-205ENST00000610452 FOXD4L5Q5VV16 416 aaPredicted RBP25.09■■□□□ 1.61
COL15A1-205ENST00000610452 FOXD4L4Q8WXT5 416 aaPredicted RBP25.09■■□□□ 1.61
COL15A1-205ENST00000610452 CALRP27797 417 aaKnown RBP25.08■■□□□ 1.61
COL15A1-205ENST00000610452 RAB3GAP2Q9H2M9 1393 aa25.08■■□□□ 1.61
COL15A1-205ENST00000610452 CCDC66A2RUB6 948 aa25.07■■□□□ 1.6
COL15A1-205ENST00000610452 RBM10P98175 930 aaKnown RBP25.07■■□□□ 1.6
COL15A1-205ENST00000610452 ZNF592Q92610 1267 aa25.07■■□□□ 1.6
COL15A1-205ENST00000610452 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
COL15A1-205ENST00000610452 TULP1O00294 542 aaPredicted RBP25.06■■□□□ 1.6
COL15A1-205ENST00000610452 DCAF11Q8TEB1 546 aa25.03■■□□□ 1.6
COL15A1-205ENST00000610452 CRBNQ96SW2 442 aa25.03■■□□□ 1.6
COL15A1-205ENST00000610452 PLIN1O60240 522 aa25.03■■□□□ 1.6
COL15A1-205ENST00000610452 SENP3Q9H4L4 574 aaPredicted RBP25.03■■□□□ 1.6
COL15A1-205ENST00000610452 NOM1Q5C9Z4 860 aaKnown RBP25.03■■□□□ 1.6
COL15A1-205ENST00000610452 KIF16BQ96L93 1317 aa25.03■■□□□ 1.6
COL15A1-205ENST00000610452 BAZ1AQ9NRL2 1556 aaPredicted RBP25.02■■□□□ 1.6
COL15A1-205ENST00000610452 NOL8Q76FK4 1167 aaKnown RBP25.01■■□□□ 1.59
COL15A1-205ENST00000610452 CLUAP1Q96AJ1 413 aa25■■□□□ 1.59
COL15A1-205ENST00000610452 GNL2Q13823 731 aaKnown RBP25■■□□□ 1.59
COL15A1-205ENST00000610452 FRAT2O75474 233 aaPredicted RBP24.99■■□□□ 1.59
COL15A1-205ENST00000610452 CENPJQ9HC77 1338 aaPredicted RBP24.99■■□□□ 1.59
COL15A1-205ENST00000610452 NASPP49321 788 aaPredicted RBP24.99■■□□□ 1.59
COL15A1-205ENST00000610452 NLRP13Q86W25 1043 aa24.99■■□□□ 1.59
COL15A1-205ENST00000610452 CCAR2Q8N163 923 aaKnown RBP24.99■■□□□ 1.59
COL15A1-205ENST00000610452 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
COL15A1-205ENST00000610452 DIAPH3Q9NSV4 1193 aa24.98■■□□□ 1.59
COL15A1-205ENST00000610452 MORC1Q86VD1 984 aa24.97■■□□□ 1.59
COL15A1-205ENST00000610452 CCDC39Q9UFE4 941 aa24.95■■□□□ 1.58
COL15A1-205ENST00000610452 GOLGA6L19H0YKK7 550 aa24.94■■□□□ 1.58
COL15A1-205ENST00000610452 HAP1P54257 671 aaPredicted RBP24.94■■□□□ 1.58
COL15A1-205ENST00000610452 TPM3P06753 285 aa24.93■■□□□ 1.58
COL15A1-205ENST00000610452 PRKRIP1Q9H875 184 aaPredicted RBP24.93■■□□□ 1.58
COL15A1-205ENST00000610452 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
COL15A1-205ENST00000610452 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
COL15A1-205ENST00000610452 SMC4Q9NTJ3 1288 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms