RNA–Protein interactions for RNA: ENST00000610335.4

LINC02340-201, Transcript of long intergenic non-protein coding RNA 2340, humanhuman

TSL 3 BASIC

Gene LINC02340, Length 626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02340-201ENST00000610335 NLRP6P59044 892 aa12.04□□□□□ -0.48
LINC02340-201ENST00000610335 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
LINC02340-201ENST00000610335 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.48
LINC02340-201ENST00000610335 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
LINC02340-201ENST00000610335 FBXO22Q8NEZ5 403 aa12.02□□□□□ -0.49
LINC02340-201ENST00000610335 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
LINC02340-201ENST00000610335 MFRPQ9BY79 579 aa12.02□□□□□ -0.49
LINC02340-201ENST00000610335 BOLA1Q9Y3E2 137 aa12.02□□□□□ -0.49
LINC02340-201ENST00000610335 G3V3G9 751 aa12.01□□□□□ -0.49
LINC02340-201ENST00000610335 CHGAP10645 457 aaKnown RBP12.01□□□□□ -0.49
LINC02340-201ENST00000610335 MICALL2Q8IY33 904 aa11.94□□□□□ -0.5
LINC02340-201ENST00000610335 DCAF8L2P0C7V8 631 aa11.93□□□□□ -0.5
LINC02340-201ENST00000610335 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
LINC02340-201ENST00000610335 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
LINC02340-201ENST00000610335 CC2D2AQ9P2K1 1620 aa11.88□□□□□ -0.51
LINC02340-201ENST00000610335 NKX1-1Q15270 411 aaPredicted RBP11.86□□□□□ -0.51
LINC02340-201ENST00000610335 RYDENQ9NUL5 291 aaKnown RBP11.86□□□□□ -0.51
LINC02340-201ENST00000610335 HOXB3P14651 431 aaPredicted RBP11.84□□□□□ -0.51
LINC02340-201ENST00000610335 CUX2O14529 1486 aa11.81□□□□□ -0.52
LINC02340-201ENST00000610335 UNC13AQ9UPW8 1703 aa11.8□□□□□ -0.52
LINC02340-201ENST00000610335 PPP1R37O75864 691 aa11.79□□□□□ -0.52
LINC02340-201ENST00000610335 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
LINC02340-201ENST00000610335 TMEM92Q6UXU6 159 aa11.78□□□□□ -0.52
LINC02340-201ENST00000610335 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
LINC02340-201ENST00000610335 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
LINC02340-201ENST00000610335 ERBB3P21860 1342 aa11.74□□□□□ -0.53
LINC02340-201ENST00000610335 GTPBP6O43824 516 aaPredicted RBP11.72□□□□□ -0.53
LINC02340-201ENST00000610335 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
LINC02340-201ENST00000610335 ZNF710Q8N1W2 664 aa11.71□□□□□ -0.53
LINC02340-201ENST00000610335 KIF3CO14782 793 aa11.7□□□□□ -0.54
LINC02340-201ENST00000610335 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
LINC02340-201ENST00000610335 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
LINC02340-201ENST00000610335 VARS2Q5ST30 1063 aaKnown RBP11.69□□□□□ -0.54
LINC02340-201ENST00000610335 MYT1LQ9UL68 1186 aa11.68□□□□□ -0.54
LINC02340-201ENST00000610335 C2orf72A6NCS6 295 aa11.67□□□□□ -0.54
LINC02340-201ENST00000610335 TMC2Q8TDI7 906 aa11.67□□□□□ -0.54
LINC02340-201ENST00000610335 RIMBP2O15034 1052 aa11.63□□□□□ -0.55
LINC02340-201ENST00000610335 ZSWIM6Q9HCJ5 1215 aa11.61□□□□□ -0.55
LINC02340-201ENST00000610335 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
LINC02340-201ENST00000610335 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
LINC02340-201ENST00000610335 CRISPLD2Q9H0B8 497 aa11.57□□□□□ -0.56
LINC02340-201ENST00000610335 FOXK1P85037 733 aa11.56□□□□□ -0.56
LINC02340-201ENST00000610335 SLC34A2O95436 690 aa11.54□□□□□ -0.56
LINC02340-201ENST00000610335 ZNF687Q8N1G0 1237 aa11.54□□□□□ -0.56
LINC02340-201ENST00000610335 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
LINC02340-201ENST00000610335 GPR153Q6NV75 609 aa11.52□□□□□ -0.57
LINC02340-201ENST00000610335 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
LINC02340-201ENST00000610335 NACADO15069 1562 aa11.51□□□□□ -0.57
LINC02340-201ENST00000610335 DSG2Q14126 1118 aa11.51□□□□□ -0.57
LINC02340-201ENST00000610335 NCKAP5LQ9HCH0 1330 aa11.51□□□□□ -0.57
LINC02340-201ENST00000610335 PDE4AP27815 886 aa11.5□□□□□ -0.57
LINC02340-201ENST00000610335 PLPP6Q8IY26 295 aa11.5□□□□□ -0.57
LINC02340-201ENST00000610335 ANKRD13DQ6ZTN6 518 aa11.49□□□□□ -0.57
LINC02340-201ENST00000610335 HAP1P54257 671 aaPredicted RBP11.47□□□□□ -0.57
LINC02340-201ENST00000610335 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
LINC02340-201ENST00000610335 MFSD10Q14728 455 aa11.46□□□□□ -0.57
LINC02340-201ENST00000610335 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
LINC02340-201ENST00000610335 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
LINC02340-201ENST00000610335 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
LINC02340-201ENST00000610335 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
LINC02340-201ENST00000610335 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
LINC02340-201ENST00000610335 VSIG10Q8N0Z9 540 aa11.44□□□□□ -0.58
LINC02340-201ENST00000610335 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
LINC02340-201ENST00000610335 CFAP44Q96MT7 982 aa11.44□□□□□ -0.58
LINC02340-201ENST00000610335 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC02340-201ENST00000610335 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
LINC02340-201ENST00000610335 LARP6Q9BRS8 491 aaKnown RBP11.43□□□□□ -0.58
LINC02340-201ENST00000610335 PTGER2P43116 358 aa11.41□□□□□ -0.58
LINC02340-201ENST00000610335 NUDT7P0C024 238 aa11.38□□□□□ -0.59
LINC02340-201ENST00000610335 OXER1Q8TDS5 423 aa11.38□□□□□ -0.59
LINC02340-201ENST00000610335 ZNF316A6NFI3 1004 aaPredicted RBP11.37□□□□□ -0.59
LINC02340-201ENST00000610335 LSM11P83369 360 aaKnown RBP eCLIP11.37□□□□□ -0.59
LINC02340-201ENST00000610335 TBC1D12O60347 775 aa11.36□□□□□ -0.59
LINC02340-201ENST00000610335 BCANQ96GW7 911 aa11.35□□□□□ -0.59
LINC02340-201ENST00000610335 KDM4FA0A1W2PPD8 638 aa11.34□□□□□ -0.59
LINC02340-201ENST00000610335 PLA2G2EQ9NZK7 142 aa11.34□□□□□ -0.59
LINC02340-201ENST00000610335 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC02340-201ENST00000610335 LHX6Q9UPM6 363 aa11.31□□□□□ -0.6
LINC02340-201ENST00000610335 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
LINC02340-201ENST00000610335 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
LINC02340-201ENST00000610335 POTEEQ6S8J3 1075 aa11.3□□□□□ -0.6
LINC02340-201ENST00000610335 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
LINC02340-201ENST00000610335 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
LINC02340-201ENST00000610335 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
LINC02340-201ENST00000610335 PBX2P40425 430 aa11.22□□□□□ -0.61
LINC02340-201ENST00000610335 SHROOM4Q9ULL8 1493 aa11.22□□□□□ -0.61
LINC02340-201ENST00000610335 EVI5O60447 810 aa11.21□□□□□ -0.61
LINC02340-201ENST00000610335 PPP4R3BQ5MIZ7 849 aa11.21□□□□□ -0.61
LINC02340-201ENST00000610335 TSHZ2Q9NRE2 1034 aa11.21□□□□□ -0.61
LINC02340-201ENST00000610335 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
LINC02340-201ENST00000610335 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
LINC02340-201ENST00000610335 E2F4Q16254 413 aa11.18□□□□□ -0.62
LINC02340-201ENST00000610335 HCSTQ9UBK5 93 aa11.18□□□□□ -0.62
LINC02340-201ENST00000610335 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
LINC02340-201ENST00000610335 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
LINC02340-201ENST00000610335 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
LINC02340-201ENST00000610335 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
LINC02340-201ENST00000610335 JPH4Q96JJ6 628 aa11.17□□□□□ -0.62
LINC02340-201ENST00000610335 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
LINC02340-201ENST00000610335 DPYSL4O14531 572 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms