RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 ABCC10Q5T3U5 1492 aa14.46□□□□□ -0.09
LINC00343-212ENST00000608624 POLA2Q14181 598 aa14.42□□□□□ -0.1
LINC00343-212ENST00000608624 KIF14Q15058 1648 aa14.41□□□□□ -0.1
LINC00343-212ENST00000608624 CFAP43Q8NDM7 1665 aa14.41□□□□□ -0.1
LINC00343-212ENST00000608624 CCDC18Q5T9S5 1454 aa14.4□□□□□ -0.1
LINC00343-212ENST00000608624 FAM69CQ0P6D2 419 aa14.4□□□□□ -0.1
LINC00343-212ENST00000608624 PPRC1Q5VV67 1664 aaKnown RBP14.39□□□□□ -0.11
LINC00343-212ENST00000608624 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
LINC00343-212ENST00000608624 KCNH8Q96L42 1107 aa14.39□□□□□ -0.11
LINC00343-212ENST00000608624 TSPOAP1O95153 1857 aa14.39□□□□□ -0.11
LINC00343-212ENST00000608624 GLI2P10070 1586 aa14.39□□□□□ -0.11
LINC00343-212ENST00000608624 MAP3K4Q9Y6R4 1608 aa14.38□□□□□ -0.11
LINC00343-212ENST00000608624 TIAM1Q13009 1591 aa14.38□□□□□ -0.11
LINC00343-212ENST00000608624 KCNA4P22459 653 aa14.36□□□□□ -0.11
LINC00343-212ENST00000608624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.36□□□□□ -0.11
LINC00343-212ENST00000608624 TROQ12816 1431 aaPredicted RBP14.35□□□□□ -0.11
LINC00343-212ENST00000608624 ABCA9Q8IUA7 1624 aa14.35□□□□□ -0.11
LINC00343-212ENST00000608624 PLEKHD1A6NEE1 506 aa14.32□□□□□ -0.12
LINC00343-212ENST00000608624 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
LINC00343-212ENST00000608624 KANK4Q5T7N3 995 aaPredicted RBP14.31□□□□□ -0.12
LINC00343-212ENST00000608624 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
LINC00343-212ENST00000608624 EHBP1L1Q8N3D4 1523 aa14.3□□□□□ -0.12
LINC00343-212ENST00000608624 CD109Q6YHK3 1445 aa14.29□□□□□ -0.12
LINC00343-212ENST00000608624 MTUS2Q5JR59 1369 aa14.28□□□□□ -0.12
LINC00343-212ENST00000608624 LRRC9Q6ZRR7 1453 aa14.28□□□□□ -0.12
LINC00343-212ENST00000608624 MAP3K1Q13233 1512 aa14.27□□□□□ -0.12
LINC00343-212ENST00000608624 CDC42BPAQ5VT25 1732 aa14.25□□□□□ -0.13
LINC00343-212ENST00000608624 CDK11AQ9UQ88 783 aaPredicted RBP14.25□□□□□ -0.13
LINC00343-212ENST00000608624 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
LINC00343-212ENST00000608624 NCOA2Q15596 1464 aa14.24□□□□□ -0.13
LINC00343-212ENST00000608624 COL17A1Q9UMD9 1497 aaPredicted RBP14.24□□□□□ -0.13
LINC00343-212ENST00000608624 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
LINC00343-212ENST00000608624 PREX2Q70Z35 1606 aa14.23□□□□□ -0.13
LINC00343-212ENST00000608624 PPARGC1BQ86YN6 1023 aaKnown RBP14.23□□□□□ -0.13
LINC00343-212ENST00000608624 SUPT6HQ7KZ85 1726 aaKnown RBP14.22□□□□□ -0.13
LINC00343-212ENST00000608624 GPATCH8Q9UKJ3 1502 aaKnown RBP14.21□□□□□ -0.13
LINC00343-212ENST00000608624 HAX1O00165 279 aa14.21□□□□□ -0.13
LINC00343-212ENST00000608624 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
LINC00343-212ENST00000608624 PLCH2O75038 1416 aa14.2□□□□□ -0.14
LINC00343-212ENST00000608624 ARHGAP5Q13017 1502 aa14.2□□□□□ -0.14
LINC00343-212ENST00000608624 FANCAO15360 1455 aa14.19□□□□□ -0.14
LINC00343-212ENST00000608624 TEX14Q8IWB6 1497 aa14.19□□□□□ -0.14
LINC00343-212ENST00000608624 FRMPD1Q5SYB0 1578 aa14.18□□□□□ -0.14
LINC00343-212ENST00000608624 PHLDB1Q86UU1 1377 aa14.18□□□□□ -0.14
LINC00343-212ENST00000608624 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
LINC00343-212ENST00000608624 ARAP3Q8WWN8 1544 aa14.17□□□□□ -0.14
LINC00343-212ENST00000608624 KDM6BO15054 1643 aa14.17□□□□□ -0.14
LINC00343-212ENST00000608624 CCNB3Q8WWL7 1395 aa14.17□□□□□ -0.14
LINC00343-212ENST00000608624 ARHGEF12Q9NZN5 1544 aa14.16□□□□□ -0.14
LINC00343-212ENST00000608624 NEO1Q92859 1461 aa14.16□□□□□ -0.14
LINC00343-212ENST00000608624 AKNAQ7Z591 1439 aa14.15□□□□□ -0.14
LINC00343-212ENST00000608624 ZNF644Q9H582 1327 aaPredicted RBP14.15□□□□□ -0.15
LINC00343-212ENST00000608624 ITSN2Q9NZM3 1697 aa14.14□□□□□ -0.15
LINC00343-212ENST00000608624 CFAP74Q9C0B2 1584 aa14.14□□□□□ -0.15
LINC00343-212ENST00000608624 ABCC1P33527 1531 aa14.14□□□□□ -0.15
LINC00343-212ENST00000608624 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
LINC00343-212ENST00000608624 SYCP2Q9BX26 1530 aa14.12□□□□□ -0.15
LINC00343-212ENST00000608624 RICTORQ6R327 1708 aa14.12□□□□□ -0.15
LINC00343-212ENST00000608624 RAPGEF3O95398 923 aa14.11□□□□□ -0.15
LINC00343-212ENST00000608624 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
LINC00343-212ENST00000608624 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINC00343-212ENST00000608624 EVX2Q03828 476 aa14.11□□□□□ -0.15
LINC00343-212ENST00000608624 MYOM3Q5VTT5 1437 aa14.11□□□□□ -0.15
LINC00343-212ENST00000608624 SCAPERQ9BY12 1400 aa14.1□□□□□ -0.15
LINC00343-212ENST00000608624 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
LINC00343-212ENST00000608624 CAMSAP2Q08AD1 1489 aa14.1□□□□□ -0.15
LINC00343-212ENST00000608624 POGZQ7Z3K3 1410 aa14.09□□□□□ -0.15
LINC00343-212ENST00000608624 TRAPPC8Q9Y2L5 1435 aa14.09□□□□□ -0.15
LINC00343-212ENST00000608624 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
LINC00343-212ENST00000608624 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
LINC00343-212ENST00000608624 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
LINC00343-212ENST00000608624 PITPNM1O00562 1244 aa14.07□□□□□ -0.16
LINC00343-212ENST00000608624 FGD6Q6ZV73 1430 aa14.07□□□□□ -0.16
LINC00343-212ENST00000608624 PTPN23Q9H3S7 1636 aa14.06□□□□□ -0.16
LINC00343-212ENST00000608624 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.16
LINC00343-212ENST00000608624 MBD5Q9P267 1494 aa14.05□□□□□ -0.16
LINC00343-212ENST00000608624 KDM5CP41229 1560 aa14.05□□□□□ -0.16
LINC00343-212ENST00000608624 AFAP1Q8N556 730 aa14.04□□□□□ -0.16
LINC00343-212ENST00000608624 YEATS2Q9ULM3 1422 aa14.04□□□□□ -0.16
LINC00343-212ENST00000608624 ZMYM4Q5VZL5 1548 aa14.04□□□□□ -0.16
LINC00343-212ENST00000608624 SIGLEC1Q9BZZ2 1709 aa14.04□□□□□ -0.16
LINC00343-212ENST00000608624 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.16
LINC00343-212ENST00000608624 TCOF1Q13428 1488 aaKnown RBP14.02□□□□□ -0.16
LINC00343-212ENST00000608624 MIA2Q96PC5 1412 aa14.02□□□□□ -0.16
LINC00343-212ENST00000608624 ZNF518AQ6AHZ1 1483 aa14.01□□□□□ -0.17
LINC00343-212ENST00000608624 KIAA1107Q9UPP5 1409 aa14.01□□□□□ -0.17
LINC00343-212ENST00000608624 ABCA6Q8N139 1617 aa14.01□□□□□ -0.17
LINC00343-212ENST00000608624 HECW2Q9P2P5 1572 aa14□□□□□ -0.17
LINC00343-212ENST00000608624 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
LINC00343-212ENST00000608624 ZFYVE16Q7Z3T8 1539 aa14□□□□□ -0.17
LINC00343-212ENST00000608624 PLEKHH2Q8IVE3 1493 aa13.99□□□□□ -0.17
LINC00343-212ENST00000608624 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
LINC00343-212ENST00000608624 CROCC2H7BZ55 1655 aa13.98□□□□□ -0.17
LINC00343-212ENST00000608624 ARHGEF5Q12774 1597 aa13.98□□□□□ -0.17
LINC00343-212ENST00000608624 DIP2CQ9Y2E4 1556 aa13.98□□□□□ -0.17
LINC00343-212ENST00000608624 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
LINC00343-212ENST00000608624 CCDC141Q6ZP82 1450 aa13.98□□□□□ -0.17
LINC00343-212ENST00000608624 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
LINC00343-212ENST00000608624 DNMT1P26358 1616 aaKnown RBP13.97□□□□□ -0.17
LINC00343-212ENST00000608624 ATP7AQ04656 1500 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms