RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 LOC105371045A0A1W2PR82 267 aa30.67■■■□□ 2.5
CTSA-217ENST00000607482 RICTORQ6R327 1708 aa30.64■■■□□ 2.5
CTSA-217ENST00000607482 POGZQ7Z3K3 1410 aa30.61■■■□□ 2.49
CTSA-217ENST00000607482 MTUS2Q5JR59 1369 aa30.59■■■□□ 2.49
CTSA-217ENST00000607482 ZFYVE16Q7Z3T8 1539 aa30.57■■■□□ 2.49
CTSA-217ENST00000607482 ARHGEF40Q8TER5 1519 aa30.57■■■□□ 2.49
CTSA-217ENST00000607482 MAGI2Q86UL8 1455 aa30.57■■■□□ 2.48
CTSA-217ENST00000607482 ZNF777Q9ULD5 760 aaPredicted RBP30.57■■■□□ 2.48
CTSA-217ENST00000607482 ZMYM4Q5VZL5 1548 aa30.56■■■□□ 2.48
CTSA-217ENST00000607482 ZNF518AQ6AHZ1 1483 aa30.52■■■□□ 2.48
CTSA-217ENST00000607482 AFAP1Q8N556 730 aa30.52■■■□□ 2.48
CTSA-217ENST00000607482 YEATS2Q9ULM3 1422 aa30.51■■■□□ 2.47
CTSA-217ENST00000607482 PREX2Q70Z35 1606 aa30.5■■■□□ 2.47
CTSA-217ENST00000607482 CCNB3Q8WWL7 1395 aa30.49■■■□□ 2.47
CTSA-217ENST00000607482 CDC42BPBQ9Y5S2 1711 aa30.48■■■□□ 2.47
CTSA-217ENST00000607482 MLECQ14165 292 aa30.47■■■□□ 2.47
CTSA-217ENST00000607482 CFDP1Q9UEE9 299 aaPredicted RBP30.47■■■□□ 2.47
CTSA-217ENST00000607482 BCORL1Q5H9F3 1711 aa30.43■■■□□ 2.46
CTSA-217ENST00000607482 ATP10AO60312 1499 aa30.43■■■□□ 2.46
CTSA-217ENST00000607482 CDC42BPAQ5VT25 1732 aa30.42■■■□□ 2.46
CTSA-217ENST00000607482 PLPPR3Q6T4P5 718 aa30.41■■■□□ 2.46
CTSA-217ENST00000607482 ADAMTSL3P82987 1691 aa30.41■■■□□ 2.46
CTSA-217ENST00000607482 GPATCH8Q9UKJ3 1502 aaKnown RBP30.4■■■□□ 2.46
CTSA-217ENST00000607482 C9orf84Q5VXU9 1444 aa30.39■■■□□ 2.46
CTSA-217ENST00000607482 PTPRMP28827 1452 aa30.39■■■□□ 2.46
CTSA-217ENST00000607482 ABCC1P33527 1531 aa30.38■■■□□ 2.45
CTSA-217ENST00000607482 EHBP1L1Q8N3D4 1523 aa30.37■■■□□ 2.45
CTSA-217ENST00000607482 TRAPPC8Q9Y2L5 1435 aa30.36■■■□□ 2.45
CTSA-217ENST00000607482 MADDQ8WXG6 1647 aa30.36■■■□□ 2.45
CTSA-217ENST00000607482 HNRNPMP52272 730 aaKnown RBP eCLIP30.35■■■□□ 2.45
CTSA-217ENST00000607482 VPS8Q8N3P4 1428 aa30.35■■■□□ 2.45
CTSA-217ENST00000607482 KDM5CP41229 1560 aa30.34■■■□□ 2.45
CTSA-217ENST00000607482 HECW2Q9P2P5 1572 aa30.34■■■□□ 2.45
CTSA-217ENST00000607482 ARHGEF12Q9NZN5 1544 aa30.32■■■□□ 2.44
CTSA-217ENST00000607482 ITSN2Q9NZM3 1697 aa30.32■■■□□ 2.44
CTSA-217ENST00000607482 PLEKHH2Q8IVE3 1493 aa30.31■■■□□ 2.44
CTSA-217ENST00000607482 MLH3Q9UHC1 1453 aa30.31■■■□□ 2.44
CTSA-217ENST00000607482 SPAG9O60271 1321 aaKnown RBP30.3■■■□□ 2.44
CTSA-217ENST00000607482 APLP2Q06481 763 aa30.29■■■□□ 2.44
CTSA-217ENST00000607482 RIMS1Q86UR5 1692 aaKnown RBP30.29■■■□□ 2.44
CTSA-217ENST00000607482 SAMD9LQ8IVG5 1584 aa30.28■■■□□ 2.44
CTSA-217ENST00000607482 SYCP2Q9BX26 1530 aa30.28■■■□□ 2.44
CTSA-217ENST00000607482 ESF1Q9H501 851 aaKnown RBP30.28■■■□□ 2.44
CTSA-217ENST00000607482 KIAA1107Q9UPP5 1409 aa30.24■■■□□ 2.43
CTSA-217ENST00000607482 TIAM1Q13009 1591 aa30.24■■■□□ 2.43
CTSA-217ENST00000607482 DIP2CQ9Y2E4 1556 aa30.23■■■□□ 2.43
CTSA-217ENST00000607482 SUPT6HQ7KZ85 1726 aaKnown RBP30.22■■■□□ 2.43
CTSA-217ENST00000607482 SIGLEC1Q9BZZ2 1709 aa30.22■■■□□ 2.43
CTSA-217ENST00000607482 NCOA2Q15596 1464 aa30.21■■■□□ 2.43
CTSA-217ENST00000607482 ZNF644Q9H582 1327 aaPredicted RBP30.21■■■□□ 2.43
CTSA-217ENST00000607482 ABCA6Q8N139 1617 aa30.19■■■□□ 2.42
CTSA-217ENST00000607482 FER1L4A9Z1Z3 1794 aa30.18■■■□□ 2.42
CTSA-217ENST00000607482 LRRC9Q6ZRR7 1453 aa30.15■■■□□ 2.42
CTSA-217ENST00000607482 KIDINS220Q9ULH0 1771 aa30.14■■■□□ 2.42
CTSA-217ENST00000607482 REREQ9P2R6 1566 aa30.14■■■□□ 2.42
CTSA-217ENST00000607482 ATP7AQ04656 1500 aa30.11■■■□□ 2.41
CTSA-217ENST00000607482 KANK4Q5T7N3 995 aaPredicted RBP30.09■■■□□ 2.41
CTSA-217ENST00000607482 CEBPAP49715 358 aaPredicted RBP30.08■■■□□ 2.41
CTSA-217ENST00000607482 RSPH4AQ5TD94 716 aa30.08■■■□□ 2.41
CTSA-217ENST00000607482 AGLP35573 1532 aa30.07■■■□□ 2.4
CTSA-217ENST00000607482 MAP3K1Q13233 1512 aa30.07■■■□□ 2.4
CTSA-217ENST00000607482 CAMSAP2Q08AD1 1489 aa30.05■■■□□ 2.4
CTSA-217ENST00000607482 TSPY4P0CV99 314 aa30.04■■■□□ 2.4
CTSA-217ENST00000607482 TSPY10P0CW01 314 aa30.04■■■□□ 2.4
CTSA-217ENST00000607482 A2MP01023 1474 aa30.02■■■□□ 2.4
CTSA-217ENST00000607482 MBD5Q9P267 1494 aa30.02■■■□□ 2.4
CTSA-217ENST00000607482 INO80Q9ULG1 1556 aaPredicted RBP30.01■■■□□ 2.39
CTSA-217ENST00000607482 CCDC141Q6ZP82 1450 aa30■■■□□ 2.39
CTSA-217ENST00000607482 GGT6Q6P531 493 aa30■■■□□ 2.39
CTSA-217ENST00000607482 LMTK3Q96Q04 1460 aa29.99■■■□□ 2.39
CTSA-217ENST00000607482 HSPA2P54652 639 aa29.99■■■□□ 2.39
CTSA-217ENST00000607482 RTEL1-TNFRSF6BF6WH68 1400 aa29.97■■■□□ 2.39
CTSA-217ENST00000607482 CNTLNQ9NXG0 1405 aa29.97■■■□□ 2.39
CTSA-217ENST00000607482 ADGBQ8N7X0 1667 aa29.93■■■□□ 2.38
CTSA-217ENST00000607482 MYOM3Q5VTT5 1437 aa29.93■■■□□ 2.38
CTSA-217ENST00000607482 MIA2Q96PC5 1412 aa29.89■■■□□ 2.38
CTSA-217ENST00000607482 DHX29Q7Z478 1369 aaKnown RBP29.89■■■□□ 2.37
CTSA-217ENST00000607482 UHRF1BP1Q6BDS2 1440 aa29.88■■■□□ 2.37
CTSA-217ENST00000607482 PLXNC1O60486 1568 aa29.87■■■□□ 2.37
CTSA-217ENST00000607482 KIF3BO15066 747 aa29.87■■■□□ 2.37
CTSA-217ENST00000607482 ARHGEF5Q12774 1597 aa29.86■■■□□ 2.37
CTSA-217ENST00000607482 PPP6R1Q9UPN7 881 aa29.86■■■□□ 2.37
CTSA-217ENST00000607482 PREX1Q8TCU6 1659 aa29.85■■■□□ 2.37
CTSA-217ENST00000607482 C3P01024 1663 aa29.85■■■□□ 2.37
CTSA-217ENST00000607482 ZMYM3Q14202 1370 aa29.84■■■□□ 2.37
CTSA-217ENST00000607482 SETD1BQ9UPS6 1966 aaKnown RBP29.81■■■□□ 2.36
CTSA-217ENST00000607482 CLTCQ00610 1675 aaKnown RBP29.78■■■□□ 2.36
CTSA-217ENST00000607482 MROH2AA6NES4 1674 aa29.76■■■□□ 2.36
CTSA-217ENST00000607482 WASHC2CQ9Y4E1 1318 aa29.75■■■□□ 2.35
CTSA-217ENST00000607482 NPATQ14207 1427 aa29.73■■■□□ 2.35
CTSA-217ENST00000607482 DMRT2Q9Y5R5 561 aa29.73■■■□□ 2.35
CTSA-217ENST00000607482 PTPN23Q9H3S7 1636 aa29.71■■■□□ 2.35
CTSA-217ENST00000607482 FGD6Q6ZV73 1430 aa29.71■■■□□ 2.35
CTSA-217ENST00000607482 ILDR1Q86SU0 546 aaPredicted RBP29.7■■■□□ 2.35
CTSA-217ENST00000607482 MAST1Q9Y2H9 1570 aa29.69■■■□□ 2.34
CTSA-217ENST00000607482 FAM50AQ14320 339 aaKnown RBP29.68■■■□□ 2.34
CTSA-217ENST00000607482 RRP7BPQ9NSQ0 103 aa29.66■■■□□ 2.34
CTSA-217ENST00000607482 CHIC2Q9UKJ5 165 aa29.63■■■□□ 2.33
CTSA-217ENST00000607482 ABCC5O15440 1437 aa29.62■■■□□ 2.33
CTSA-217ENST00000607482 PTPRKQ15262 1439 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms